Moc07g04120 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g04120
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr7: 3562846 .. 3565749 (-)
RNA-Seq ExpressionMoc07g04120
SyntenyMoc07g04120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTATAACCCATCTCAAGGTAACATATTAATTGCTTAATATGTTTTATCTTTTTGTATCATGCAACAATAATAACACTTTACTTGTTCGGTGTTTTTGTTTTTTTTAAGGGTCATTTCGATTTCGTCAAGTCAGGGCCAATTAAGATGAGTTTCCTTGATCATGCGATGCAATCAACACATAAGGCATATAGGGTAAAATTGCACAAATACTACCTAAGTCATCCCACACCTGAGATTGTTCGCAACACTTCGCCTGAGCGGTTGTTGACAAGACCAGACGATTGAAACATGTTATGCGATAGATGGGAGACGAATAAGTGGAAGGTACTTTACGAATATAACTTGTACTTCTTTTCTATACTTTATATTCAATATTCTGATGTACGTTGCTTTTTTTAGCAAAAATCTGAGACCAACAAACGCAACAGGGCGAAGCTCCCATTCAACCATCTTGCGAGGCCAAAGACGTTTGCTATTATTGCCAATGAGAAGGTACACTGCAATAAGCTAAATTCTTTCGTATACATATATTATTTATGGTAATCAACAATTATTTGTTATCGAGTGCAAAAAGAGCAAGAGGGAGGCGAAAATTTTAATGAAATTGATTTGTTTAGGGAGACTAGAACTCTGATGTTAAAGGTTGGGTCGAAGCTACGGAGACAGCTTATGTAAGCTTACTACTCTTATAATAATTAACTTCAGATTACGCTTCAAATTGTATGTATAAACATTTTGTAGGTTTTTCCTTTACTATGTATGCAGTTAGACATGATGCGTGTCAGAGAAGAATCTATGCAAGACGGAGGTGAACTGATGCCAGACCCATACGTACTGGAAATAGTGCTTAGGCATCGATCAGGGTACGTTAAAAGCACTGGTTGGGACTCAAAACCTAAATCTCGTAAAGGTTGTTCTTCAAGTGTAGCTTCTTCACAGCGGGAACAAGAGATGTTGGAAGAAATACATACCCTAAAAGAAGAATTTTAGGAGTGTATCTCACAGAAAGACAAATAGTTTGACGAGCATCTCTCACCGCATTCTACGCAGTTAAATGTCAGATTTGCGATCAATGATGCTAAAATTTATTACTCTTTCTGGTAGAGCTAGCTCGTTAAAATAGGTACGTATACATAGAGCATTGTTAGAATTCAATGACTGTAAATGTGGCTATCATGCATTGGTAGCCATTTGAAGTTTGTTTGATTAGTTTTTGTTAACTTTGAAGGAAGTGTCGGGGGGGGGGGGGGGGGTGGTTTTATATACTTTTCCTTTAGTTTTTAGTGCGGATTGAATTTGAATGAGTTATGGTAGCCATTTGAAGTTTGTTTTTTGATTATTTTTAGTTAACTTTGAAGGGAAGTATTGGAGGGGGGGGGGGGGTCTTATACGTACTTTTCATTTAGTTTGTGCAATGTGGATTGAATTTGAATGAGTTATGGTAGTCATTTGAAGTTTGTTTGATTAGTGTTTGTTAACTTTGAATGAAGTGTGGGGGGGGGGGGGGGTGTCCTTACATACTTTTCCTTTTGTTTGTGCAATGTAGATTGAATTTGAATGAGTAATATAGGTATGTTTGCTTTTGGTTACTTTTGGTAATTTTGTTTTATTGAAGTGTTTTTGGATAACATTGTTGAATTTATGTGCATTGGTCATAGAGTGTGTGTACATGCTTTTAAGACTTAGTGAGAGTAAGTTTTGTGAATTTGAAGTTTGTTTTAATGAGTTTTTATTGACTTTGAATGAAAGTGTTTGGGGGAGAAGGTGCTCTTATATATACTTTTCCTTTAGTTTGTGAATTTTGGATTAAGTTTGAATGAATTATATAAAATGAAAGTTTGAATGCTTAGTTTGAGTTCATGACATGTGGAGTTAGTTAGAATAGAATACGTTTAAGTTGTTGATATTGAGACCTTTTAGAATAGGTTTCGGTTGTTGAATTTTACTTTGTATTGACTTTTTATACTCTTGTAAAACTAATGTTTGTTTAATATTATAAATCATTATATGAAATTTGAGAAAGTTCATGGCAACCAAATAATAAAAAAAACAAAAAACAAAAAAAATGACCTATTGCAACCAAATCCACGGTTGGTCGCCAAAACAAACTATGACGACGAACCCTAAGTCATTGCCAAAGCAAGTCTATGTCGTCGCCTTAGCCTACTTTGGCGACGAAATAAAGTATTTGTTGCCGAAGCCACGAAAACGGGATTTCGTTATCGAAACCCTATCGCAATGGGGCAACGGCGACGATATTTTTTCATCGCCAAACCATTCGGCGATGAATTTCTACCCTATAGGACTTTGTTTTTTGGTTTCACCAAAAAAGCCTCTCACTAATGGGAATAATTGTCCTCTATCTCTATACCATGGATCATCCTCTTGCTTAGCCAATGTAGGACTTTTGTTTCCATTCCTCAACATAATTGGATACAACAAAAGAGATAAAGATTAGCCGACAAGACAAGTCCTTGACTGGCATCTTATCTCTTTGGAATCTACTTTATAAAAAGTAAAGATAAGTGTGGCCGACATGGGGCATCTTATCTCTTTGGAATCTACTTTATAAAAAATAAAGATAAGTGTGGCCGACGGGGGCATCTTATCTTTCCAAAATAAATAAAGTAAAGCAGAAAATTATTACAAACTGACAAAATAAAGTAAAGACAGAAAGTAAAAGCTGATATGACTGTTTTCAGACTAGAAACTTGCTTCAGAAGTTTTGATGAAGTCTCCCGGCTTCTTCTGATTTAGTGAGGATTGCGCATTCTGTATATAATCGTAAAGGCTTCTCTGGTGTCCGATTAGGCCGTTCCATCCAGGGTCTTACTCACGGCCTCTCGCCTAAACTGCCCAAGGAACACCTTCTATCTTCGACCAGGGTTGCCTTGTGA

mRNA sequence

ATGGCAATTATAACCCATCTCAAGGGTCATTTCGATTTCGTCAAGTCAGGGCCAATTAAGATGAGTTTCCTTGATCATGCGATGCAATCAACACATAAGGCATATAGGCAAAAATCTGAGACCAACAAACGCAACAGGGCGAAGCTCCCATTCAACCATCTTGCGAGGCCAAAGACGTTTGCTATTATTGCCAATGAGAAGTTAGACATGATGCGTGTCAGAGAAGAATCTATGCAAGACGGAGGTGAACTGATGCCAGACCCATACGTACTGGAAATAGTGCTTAGGCATCGATCAGGGTACGTTAAAAGCACTGGTTGGGACTCAAAACCTAAATCTCGTAAAGTGAGGATTGCGCATTCTGTATATAATCGTAAAGGCTTCTCTGGTGTCCGATTAGGCCGTTCCATCCAGGGTCTTACTCACGGCCTCTCGCCTAAACTGCCCAAGGAACACCTTCTATCTTCGACCAGGGTTGCCTTGTGA

Coding sequence (CDS)

ATGGCAATTATAACCCATCTCAAGGGTCATTTCGATTTCGTCAAGTCAGGGCCAATTAAGATGAGTTTCCTTGATCATGCGATGCAATCAACACATAAGGCATATAGGCAAAAATCTGAGACCAACAAACGCAACAGGGCGAAGCTCCCATTCAACCATCTTGCGAGGCCAAAGACGTTTGCTATTATTGCCAATGAGAAGTTAGACATGATGCGTGTCAGAGAAGAATCTATGCAAGACGGAGGTGAACTGATGCCAGACCCATACGTACTGGAAATAGTGCTTAGGCATCGATCAGGGTACGTTAAAAGCACTGGTTGGGACTCAAAACCTAAATCTCGTAAAGTGAGGATTGCGCATTCTGTATATAATCGTAAAGGCTTCTCTGGTGTCCGATTAGGCCGTTCCATCCAGGGTCTTACTCACGGCCTCTCGCCTAAACTGCCCAAGGAACACCTTCTATCTTCGACCAGGGTTGCCTTGTGA

Protein sequence

MAIITHLKGHFDFVKSGPIKMSFLDHAMQSTHKAYRQKSETNKRNRAKLPFNHLARPKTFAIIANEKLDMMRVREESMQDGGELMPDPYVLEIVLRHRSGYVKSTGWDSKPKSRKVRIAHSVYNRKGFSGVRLGRSIQGLTHGLSPKLPKEHLLSSTRVAL
Homology
[Close]
BLAST of Moc07g04120 vs. NCBI nr
Match: RVX13246.1 (hypothetical protein CK203_018035 [Vitis vinifera])

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-04
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 0 

Query: 35  YRQKSETNKRNRAKLPFNHLARPKTFAIIA--NEKLDMMRVREESMQDGGELMPDPYVLE 94
           +++++  N  NR KLPFNH    K FA     N   +M +++E+S QDG   + D  + +
Sbjct: 170 FKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMEEMRKLQEQSTQDGDTPISDLEITQ 229

Query: 95  IVLRHRSGYVKSTGWDSKPK 113
            VL  RSGY++  G+ S+ K
Sbjct: 230 RVLGKRSGYIRGLGYGSRLK 249

[Close]
BLAST of Moc07g04120 vs. ExPASy TrEMBL
Match: A0A438JWB0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_018035 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 0 

Query: 35  YRQKSETNKRNRAKLPFNHLARPKTFAIIA--NEKLDMMRVREESMQDGGELMPDPYVLE 94
           +++++  N  NR KLPFNH    K FA     N   +M +++E+S QDG   + D  + +
Sbjct: 170 FKKRATINSENREKLPFNHRGGSKPFAFHRQHNSMEEMRKLQEQSTQDGDTPISDLEITQ 229

Query: 95  IVLRHRSGYVKSTGWDSKPK 113
            VL  RSGY++  G+ S+ K
Sbjct: 230 RVLGKRSGYIRGLGYGSRLK 249

The following BLAST results are available for this feature:
BLAST of Moc07g04120 vs. NCBI nr
Match NameE-valueIdentityDescription
RVX13246.13.9e-0436.25hypothetical protein CK203_018035 [Vitis vinifera][more]
BLAST of Moc07g04120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc07g04120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A438JWB01.9e-0436.25Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_018035 PE=4 SV=1[more]
BLAST of Moc07g04120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g04120.1Moc07g04120.1mRNA