Moc07g02580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g02580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ulp1-like peptidase
Location	chr7: 2195538 .. 2195892 (-)
RNA-Seq Expression	Moc07g02580
Synteny	Moc07g02580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGATTCGCAATAGGCGACGTACTTCTATCCGTAAGTTCGGCTTACCTTTCACTCATGTAACGAACGATATTACTTCGATACGTGAATGACGTTTGTGGGGGGTTTTTTTTTGCAGAACTTGCTACGACGAACAGACGGACCATATGCAGCTATAAAGCCGGGTGTCCTGCCGACGAAATGTACGTATGATTGGAGGCAAGAGCGTACCATCTTTCGGTACGTGCTTGGTCGACAATCAGACTACGACACCCCATGGAGCGAGGCCGATATCGTGTACACGCCGATGAATATTGGCTGCAACCACTGGGTCATGATCGGGATTGATCTTGTGGAGGGTGATTTAACCGTATGA

mRNA sequence

ATGCGATTCGCAATAGGCGACGTACTTCTATCCAACTTGCTACGACGAACAGACGGACCATATGCAGCTATAAAGCCGGGTGTCCTGCCGACGAAATGTACGTATGATTGGAGGCAAGAGCGTACCATCTTTCGGTACGTGCTTGGTCGACAATCAGACTACGACACCCCATGGAGCGAGGCCGATATCGTGTACACGCCGATGAATATTGGCTGCAACCACTGGGTCATGATCGGGATTGATCTTGTGGAGGGTGATTTAACCGTATGA

Coding sequence (CDS)

ATGCGATTCGCAATAGGCGACGTACTTCTATCCAACTTGCTACGACGAACAGACGGACCATATGCAGCTATAAAGCCGGGTGTCCTGCCGACGAAATGTACGTATGATTGGAGGCAAGAGCGTACCATCTTTCGGTACGTGCTTGGTCGACAATCAGACTACGACACCCCATGGAGCGAGGCCGATATCGTGTACACGCCGATGAATATTGGCTGCAACCACTGGGTCATGATCGGGATTGATCTTGTGGAGGGTGATTTAACCGTATGA

Protein sequence

MRFAIGDVLLSNLLRRTDGPYAAIKPGVLPTKCTYDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIGCNHWVMIGIDLVEGDLTV

Homology

[Close]

BLAST of Moc07g02580 vs. NCBI nr
Match: XP_022158807.1 (uncharacterized protein LOC111025273 [Momordica charantia])

HSP 1 Score: 177.9 bits (450), Expect = 3.7e-41
Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MRFAIGDVLLSNLLRRTDGPYAAIKPGVLPTKCTYDWRQERTIFRYVLGRQSDYDTPWSE 60
           ++FAIGDVLLSNLLRRTDGPYAA+KPGVLP+KCTYDWRQERTIFRYVLGRQSDYDT WSE
Sbjct: 58  VQFAIGDVLLSNLLRRTDGPYAAMKPGVLPSKCTYDWRQERTIFRYVLGRQSDYDTLWSE 117

Query: 61  ADIVYTPMNIGCNHWVMIGIDLVEGDLTV 90
           ADIVYT MNIG NHWVMIGIDLVEGDLTV
Sbjct: 118 ADIVYTRMNIGGNHWVMIGIDLVEGDLTV 146

[Close]

BLAST of Moc07g02580 vs. NCBI nr
Match: XP_022153247.1 (uncharacterized protein LOC111020782 [Momordica charantia])

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-24
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0


Query: 35 YDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIGCNHWVMIGIDLVEGDLTV 90
          YDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIG NHWVMIGIDLVEGDLTV
Sbjct: 2  YDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIGGNHWVMIGIDLVEGDLTV 56

[Close]

BLAST of Moc07g02580 vs. NCBI nr
Match: XP_022155476.1 (uncharacterized protein LOC111022607 [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 5.1e-22
Identity = 52/73 (71.23%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 2   RFAIGDVLLSNLLRRTDGPYAAIKPGVLPTKCTYDWRQERTIFRYVLGRQSDYDTPWSEA 61
           +FAIGDVLLS LL RTDGPYAA+KPGVL T+  Y   QE TIFRYV GRQSD +  W++A
Sbjct: 225 KFAIGDVLLSTLLNRTDGPYAAMKPGVLSTRIEYPCSQENTIFRYVFGRQSDQNVAWTDA 284

Query: 62  DIVYTPMNIGCNH 75
           DIVYTP+NIG NH
Sbjct: 285 DIVYTPINIGGNH 297

[Close]

BLAST of Moc07g02580 vs. NCBI nr
Match: XP_022148137.1 (uncharacterized protein LOC111016890 [Momordica charantia])

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-20
Identity = 45/66 (68.18%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 24 IKPGVLPTKCTYDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIGCNHWVMIGIDLV 83
          +KP VL T+  Y W +E TI+RYV GRQSD++ PWS+ADIVYTPMN+G NHWVM+GIDLV
Sbjct: 1  MKPXVLSTRINYPWXEENTIWRYVHGRQSDHNVPWSDADIVYTPMNVGGNHWVMLGIDLV 60

Query: 84 EGDLTV 90
          +GD+TV
Sbjct: 61 QGDITV 66

[Close]

BLAST of Moc07g02580 vs. NCBI nr
Match: XP_022154364.1 (uncharacterized protein LOC111021646 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-12
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 2   RFAIGDVLLSNLLRRTDGPYAAIK-PGVLPTKCT--YDWR-QERTIFRYVLGRQSDYDTP 61
           +F  GDVL+SN LR TDG Y  ++ P V+ ++    YDW  +  ++  Y+ G  SD DT 
Sbjct: 17  KFTTGDVLISNFLRSTDGVYVMMQSPNVIASRVASDYDWEGRAWSMLSYIDGTHSDNDTR 76

Query: 62  WSEADIVYTPMNIGCNHWVMIGIDLVEGDLTV 90
           W + D VY P NIG  HW++I ID  EG+L V
Sbjct: 77  WMDVDAVYLPYNIGGVHWIVICIDFDEGELIV 108

[Close]

BLAST of Moc07g02580 vs. ExPASy TrEMBL
Match: A0A6J1DY60 (uncharacterized protein LOC111025273 OS=Momordica charantia OX=3673 GN=LOC111025273 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-41
Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MRFAIGDVLLSNLLRRTDGPYAAIKPGVLPTKCTYDWRQERTIFRYVLGRQSDYDTPWSE 60
           ++FAIGDVLLSNLLRRTDGPYAA+KPGVLP+KCTYDWRQERTIFRYVLGRQSDYDT WSE
Sbjct: 58  VQFAIGDVLLSNLLRRTDGPYAAMKPGVLPSKCTYDWRQERTIFRYVLGRQSDYDTLWSE 117

Query: 61  ADIVYTPMNIGCNHWVMIGIDLVEGDLTV 90
           ADIVYT MNIG NHWVMIGIDLVEGDLTV
Sbjct: 118 ADIVYTRMNIGGNHWVMIGIDLVEGDLTV 146

[Close]

BLAST of Moc07g02580 vs. ExPASy TrEMBL
Match: A0A6J1DID7 (uncharacterized protein LOC111020782 OS=Momordica charantia OX=3673 GN=LOC111020782 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-24
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0


Query: 35 YDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIGCNHWVMIGIDLVEGDLTV 90
          YDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIG NHWVMIGIDLVEGDLTV
Sbjct: 2  YDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIGGNHWVMIGIDLVEGDLTV 56

[Close]

BLAST of Moc07g02580 vs. ExPASy TrEMBL
Match: A0A6J1DRS0 (uncharacterized protein LOC111022607 OS=Momordica charantia OX=3673 GN=LOC111022607 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-22
Identity = 52/73 (71.23%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 2   RFAIGDVLLSNLLRRTDGPYAAIKPGVLPTKCTYDWRQERTIFRYVLGRQSDYDTPWSEA 61
           +FAIGDVLLS LL RTDGPYAA+KPGVL T+  Y   QE TIFRYV GRQSD +  W++A
Sbjct: 225 KFAIGDVLLSTLLNRTDGPYAAMKPGVLSTRIEYPCSQENTIFRYVFGRQSDQNVAWTDA 284

Query: 62  DIVYTPMNIGCNH 75
           DIVYTP+NIG NH
Sbjct: 285 DIVYTPINIGGNH 297

[Close]

BLAST of Moc07g02580 vs. ExPASy TrEMBL
Match: A0A6J1D492 (uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016890 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-20
Identity = 45/66 (68.18%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 24 IKPGVLPTKCTYDWRQERTIFRYVLGRQSDYDTPWSEADIVYTPMNIGCNHWVMIGIDLV 83
          +KP VL T+  Y W +E TI+RYV GRQSD++ PWS+ADIVYTPMN+G NHWVM+GIDLV
Sbjct: 1  MKPXVLSTRINYPWXEENTIWRYVHGRQSDHNVPWSDADIVYTPMNVGGNHWVMLGIDLV 60

Query: 84 EGDLTV 90
          +GD+TV
Sbjct: 61 QGDITV 66

[Close]

BLAST of Moc07g02580 vs. ExPASy TrEMBL
Match: A0A6J1DLV0 (uncharacterized protein LOC111021646 OS=Momordica charantia OX=3673 GN=LOC111021646 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 2   RFAIGDVLLSNLLRRTDGPYAAIK-PGVLPTKCT--YDWR-QERTIFRYVLGRQSDYDTP 61
           +F  GDVL+SN LR TDG Y  ++ P V+ ++    YDW  +  ++  Y+ G  SD DT 
Sbjct: 17  KFTTGDVLISNFLRSTDGVYVMMQSPNVIASRVASDYDWEGRAWSMLSYIDGTHSDNDTR 76

Query: 62  WSEADIVYTPMNIGCNHWVMIGIDLVEGDLTV 90
           W + D VY P NIG  HW++I ID  EG+L V
Sbjct: 77  WMDVDAVYLPYNIGGVHWIVICIDFDEGELIV 108

The following BLAST results are available for this feature:

BLAST of Moc07g02580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158807.1	3.7e-41	92.13	uncharacterized protein LOC111025273 [Momordica charantia]	[more]
XP_022153247.1	4.2e-24	98.18	uncharacterized protein LOC111020782 [Momordica charantia]	[more]
XP_022155476.1	5.1e-22	71.23	uncharacterized protein LOC111022607 [Momordica charantia]	[more]
XP_022148137.1	2.8e-20	68.18	uncharacterized protein LOC111016890 [Momordica charantia]	[more]
XP_022154364.1	2.1e-12	44.57	uncharacterized protein LOC111021646 [Momordica charantia]	[more]

BLAST of Moc07g02580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g02580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DY60	1.8e-41	92.13	uncharacterized protein LOC111025273 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DID7	2.0e-24	98.18	uncharacterized protein LOC111020782 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DRS0	2.5e-22	71.23	uncharacterized protein LOC111022607 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D492	1.4e-20	68.18	uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DLV0	1.0e-12	44.57	uncharacterized protein LOC111021646 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Moc07g02580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 57..85 e-value: 4.8E-6 score: 26.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g02580.1	Moc07g02580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity