Moc07g02010 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g02010
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S ribosomal protein L38
Locationchr7: 1563060 .. 1564181 (+)
RNA-Seq ExpressionMoc07g02010
SyntenyMoc07g02010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGATGGAAAGGGAAGTGTTTTTGACAATGGCAAGAGTGATTTTGGGTATCACTCCCAAACACCCTTATTATTATTGGTTCTTGATCCTCTTGTTTTGTATTTCGATGTGCAGCCGAAGCAAATTCACGAGATCAAAGATTTCCTTCTCACTGCCAGAAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAAAGATGTCGTCAAGTTCAAAGTTCGATGTTCCAAATATCTTTATACTCTGTGTGTTTTTGACTCTGAGAAGGCAGACAAGTTGAAGCAGTCTCTTCCACCAGGTTAACTTTTGATTTACTACAACTGCAACTTTCTTTAGAGTATGATTGGAAGTACTTTTAAATGGTTAAAAGTATTTCACAAAGTATTTTTATATTTGACTGAGCTTTTATCATCTGCTTTATGCAATCCTTTATTTCCTAAAATACGCTTTTCTCACTAACTTCATAGAAATTTTCTCACCACCTTGTTTCTTCTAACTTCTCTCCACATTAGATATGTCCTCACTAGTTTCTCTCTGCTTTGATGTTTTCAAACTAGTTTATCTCTGTAGGGCTTTTCTCGCTAGCTTCTCTCTCTATAGACATTTTCTCGCTAGCTTCTCTAGACGTTTCCTCACTAGCTTCTATGTGCTGTGCATAGACGTTTCCTCACTAGCTTCTATGTGCTGGGTATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATATGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGATGTTTTCTCACTGGCATCTATGTGTTGTGCATATACGTTTTCTCACTAGCTTCTATGTGTTGTGCATAGATGTTTCCTCACTAGCTTCTATGTGCTGTGTATAGACGTTTCCTCAGTCCTCACTAGCTTCTATGTACTGTGCATAGACGTTCCTCACTGGCTTCTATGTGTTGTGCATAGACGTTTCTTACTGGCTTCTATGTGCTGTGCATAG

mRNA sequence

ATGATCGATGGAAAGGGAAGTGTTTTTGACAATGGCAAGAGTGATTTTGGGTATCACTCCCAAACACCCTTATTATTATTGGTTCTTGATCCTCTTGTTTTGTATTTCGATGTGCAGCCGAAGCAAATTCACGAGATCAAAGATTTCCTTCTCACTGCCAGAAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAAAGATGTCGTCAAGTTCAAAGTTCGATGTTCCAAATATCTTTATACTCTGTGTGTTTTTGACTCTGAGAAGGCAGACAAGTTGAAGCAGTCTCTTCCACCAGACGTTTCCTCACTAGCTTCTATGTGCTGGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATATGTTTCCTCACTAGCTTCTATGTGCTGTGTATAGACGTTTCCTCAGTCCTCACTAGCTTCTATGTACTGTGCATAGACGTTCCTCACTGGCTTCTATGTGTTGTGCATAGACGTTTCTTACTGGCTTCTATGTGCTGTGCATAG

Coding sequence (CDS)

ATGATCGATGGAAAGGGAAGTGTTTTTGACAATGGCAAGAGTGATTTTGGGTATCACTCCCAAACACCCTTATTATTATTGGTTCTTGATCCTCTTGTTTTGTATTTCGATGTGCAGCCGAAGCAAATTCACGAGATCAAAGATTTCCTTCTCACTGCCAGAAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAAAGATGTCGTCAAGTTCAAAGTTCGATGTTCCAAATATCTTTATACTCTGTGTGTTTTTGACTCTGAGAAGGCAGACAAGTTGAAGCAGTCTCTTCCACCAGACGTTTCCTCACTAGCTTCTATGTGCTGGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATGTGATGTGCATAGACGTTTCCTCACTGGCATCTATATGTTTCCTCACTAGCTTCTATGTGCTGTGTATAGACGTTTCCTCAGTCCTCACTAGCTTCTATGTACTGTGCATAGACGTTCCTCACTGGCTTCTATGTGTTGTGCATAGACGTTTCTTACTGGCTTCTATGTGCTGTGCATAG

Protein sequence

MIDGKGSVFDNGKSDFGYHSQTPLLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVSSLASMCWTFPHWHLCDVHRRFLTGIYVMCIDVSSLASICFLTSFYVLCIDVSSVLTSFYVLCIDVPHWLLCVVHRRFLLASMCCA
Homology
[Close]
BLAST of Moc07g02010 vs. NCBI nr
Match: KAE8646721.1 (hypothetical protein Csa_005163 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-27
Identity = 75/116 (64.66%), Postives = 80/116 (68.97%), Query Frame = 0 

Query: 8   VFDNGKSDFGYHSQTPLLLLVLDPLVLYFDV-----QPKQIHEIKDFLLTARRKDARSVK 67
           VFD+ K+D    S  P+ +L L    L   +      PKQIHEIKDFLLTARRKDARSVK
Sbjct: 47  VFDSEKADKLKQSLPPVRVLTLHNQQLRGSLCSATKMPKQIHEIKDFLLTARRKDARSVK 106

Query: 68  IKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDVSSLASMCWTFPHWHLC 119
           IKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPD        W    W  C
Sbjct: 107 IKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDYDPRNLPSWDLVWWIRC 162

[Close]
BLAST of Moc07g02010 vs. NCBI nr
Match: KAF9663201.1 (hypothetical protein SADUNF_Sadunf17G0013700 [Salix dunnii])

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-27
Identity = 68/79 (86.08%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 27  LVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVF 86
           +VL   +L FD QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVF
Sbjct: 8   VVLSTFILCFDTQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVF 67

Query: 87  DSEKADKLKQSLPPDVSSL 106
           D EKADKLKQSLPP  S L
Sbjct: 68  DPEKADKLKQSLPPGNSLL 86

[Close]
BLAST of Moc07g02010 vs. NCBI nr
Match: CAA3019627.1 (60S ribosomal L38 [Olea europaea subsp. europaea])

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-26
Identity = 67/79 (84.81%), Postives = 68/79 (86.08%), Query Frame = 0 

Query: 25  LLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLC 84
           L L  D  V   D QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLC
Sbjct: 3   LFLFADSFVSLCDTQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLC 62

Query: 85  VFDSEKADKLKQSLPPDVS 104
           VFD EKADKLKQSLPP +S
Sbjct: 63  VFDPEKADKLKQSLPPGLS 81

[Close]
BLAST of Moc07g02010 vs. NCBI nr
Match: KAB1213254.1 (60S ribosomal protein L38 [Morella rubra])

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-26
Identity = 67/77 (87.01%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 24  LLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL 83
           LL    +   L+ DVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
Sbjct: 5   LLAFDSEQFCLHCDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL 64

Query: 84  CVFDSEKADKLKQSLPP 101
           CVFDSEKADKLKQSLPP
Sbjct: 65  CVFDSEKADKLKQSLPP 81

[Close]
BLAST of Moc07g02010 vs. NCBI nr
Match: RVW73314.1 (60S ribosomal protein L38 [Vitis vinifera])

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-26
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 35  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 94
           YF +QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL
Sbjct: 12  YFRLQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 71

Query: 95  KQSLPP 101
           KQSLPP
Sbjct: 72  KQSLPP 77

[Close]
BLAST of Moc07g02010 vs. ExPASy Swiss-Prot
Match: O22860 (60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.8e-27
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 40  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 99
           PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 100 PDVS 104
           P +S
Sbjct: 62  PGLS 65

[Close]
BLAST of Moc07g02010 vs. ExPASy Swiss-Prot
Match: P46291 (60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.3e-25
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 40  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 99
           PKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSLP 61

Query: 100 PDVS 104
           P +S
Sbjct: 62  PGLS 65

[Close]
BLAST of Moc07g02010 vs. ExPASy Swiss-Prot
Match: Q95V84 (60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-22
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 40  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 99
           PKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSLP 61

Query: 100 PDVS 104
           P ++
Sbjct: 62  PGLA 65

[Close]
BLAST of Moc07g02010 vs. ExPASy Swiss-Prot
Match: Q32PB9 (60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20
Identity = 48/64 (75.00%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 40  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 99
           P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLP
Sbjct: 2   PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLP 61

Query: 100 PDVS 104
           P ++
Sbjct: 62  PGLA 65

[Close]
BLAST of Moc07g02010 vs. ExPASy Swiss-Prot
Match: P63173 (60S ribosomal protein L38 OS=Homo sapiens OX=9606 GN=RPL38 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20
Identity = 48/64 (75.00%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 40  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 99
           P++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSLP
Sbjct: 2   PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLP 61

Query: 100 PDVS 104
           P ++
Sbjct: 62  PGLA 65

[Close]
BLAST of Moc07g02010 vs. ExPASy TrEMBL
Match: A0A6A1VKI7 (60S ribosomal protein L38 OS=Morella rubra OX=262757 GN=CJ030_MR5G009651 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.0e-27
Identity = 67/77 (87.01%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 24  LLLLVLDPLVLYFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL 83
           LL    +   L+ DVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL
Sbjct: 5   LLAFDSEQFCLHCDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTL 64

Query: 84  CVFDSEKADKLKQSLPP 101
           CVFDSEKADKLKQSLPP
Sbjct: 65  CVFDSEKADKLKQSLPP 81

[Close]
BLAST of Moc07g02010 vs. ExPASy TrEMBL
Match: A0A438CVC8 (60S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_3 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-26
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 35  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 94
           YF +QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL
Sbjct: 12  YFRLQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 71

Query: 95  KQSLPP 101
           KQSLPP
Sbjct: 72  KQSLPP 77

[Close]
BLAST of Moc07g02010 vs. ExPASy TrEMBL
Match: A0A438GMB0 (60S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_1 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-26
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 35  YFDVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 94
           YF +QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL
Sbjct: 12  YFRLQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKL 71

Query: 95  KQSLPP 101
           KQSLPP
Sbjct: 72  KQSLPP 77

[Close]
BLAST of Moc07g02010 vs. ExPASy TrEMBL
Match: A0A103XQP8 (Ribosomal protein L38e (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_002813 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-26
Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 0 

Query: 8   VFDNGKSDFGYHSQTPLLLLVLDPLVL----YFDVQPKQIHEIKDFLLTARRKDARSVKI 67
           VFD  K++    S  P+ LL    ++L    +F  QPKQIHEIKDFLLTARRKDARSVKI
Sbjct: 60  VFDAEKANKLKQSLPPVCLLSFIYIILDIFCWFYTQPKQIHEIKDFLLTARRKDARSVKI 119

Query: 68  KRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPDV 103
           KRSKDVVKFKVRCSKYLYTLCVFD+EKA+KLKQSLPP +
Sbjct: 120 KRSKDVVKFKVRCSKYLYTLCVFDAEKANKLKQSLPPGI 158

[Close]
BLAST of Moc07g02010 vs. ExPASy TrEMBL
Match: A0A6J1IBC7 (60S ribosomal protein L38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471373 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 3.5e-26
Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 0 

Query: 37  DVQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 96
           D QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ
Sbjct: 2   DGQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 61

Query: 97  SLPPDVS 104
           SLPP +S
Sbjct: 62  SLPPGLS 68

[Close]
BLAST of Moc07g02010 vs. TAIR 10
Match: AT2G43460.1 (Ribosomal L38e protein family )

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-28
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 40  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 99
           PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 100 PDVS 104
           P +S
Sbjct: 62  PGLS 65

[Close]
BLAST of Moc07g02010 vs. TAIR 10
Match: AT3G59540.1 (Ribosomal L38e protein family )

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-28
Identity = 59/64 (92.19%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 40  PKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 99
           PKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 100 PDVS 104
           P +S
Sbjct: 62  PGLS 65

The following BLAST results are available for this feature:
BLAST of Moc07g02010 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646721.11.3e-2764.66hypothetical protein Csa_005163 [Cucumis sativus][more]
KAF9663201.12.2e-2786.08hypothetical protein SADUNF_Sadunf17G0013700 [Salix dunnii][more]
CAA3019627.11.4e-2684.8160S ribosomal L38 [Olea europaea subsp. europaea][more]
KAB1213254.11.4e-2687.0160S ribosomal protein L38 [Morella rubra][more]
RVW73314.12.5e-2696.9760S ribosomal protein L38 [Vitis vinifera][more]
BLAST of Moc07g02010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O228606.8e-2792.1960S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1[more]
P462918.3e-2587.5060S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1[more]
Q95V841.3e-2281.2560S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1[more]
Q32PB92.1e-2075.0060S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4[more]
P631732.1e-2075.0060S ribosomal protein L38 OS=Homo sapiens OX=9606 GN=RPL38 PE=1 SV=2[more]
BLAST of Moc07g02010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A1VKI77.0e-2787.0160S ribosomal protein L38 OS=Morella rubra OX=262757 GN=CJ030_MR5G009651 PE=3 SV... [more]
A0A438CVC81.2e-2696.9760S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_3 PE=3 SV=1[more]
A0A438GMB01.2e-2696.9760S ribosomal protein L38 OS=Vitis vinifera OX=29760 GN=RPL38A_1 PE=3 SV=1[more]
A0A103XQP81.2e-2670.71Ribosomal protein L38e (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 G... [more]
A0A6J1IBC73.5e-2695.5260S ribosomal protein L38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471373... [more]
BLAST of Moc07g02010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43460.14.8e-2892.19Ribosomal L38e protein family [more]
AT3G59540.14.8e-2892.19Ribosomal L38e protein family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038464Ribosomal protein L38e superfamilyGENE3D3.30.720.90coord: 39..105
e-value: 9.3E-32
score: 110.9
IPR002675Ribosomal protein L38ePFAMPF01781Ribosomal_L38ecoord: 40..103
e-value: 2.3E-31
score: 107.7
IPR002675Ribosomal protein L38ePANTHERPTHR1096560S RIBOSOMAL PROTEIN L38coord: 34..102
NoneNo IPR availablePANTHERPTHR10965:SF17BNACNNG77070D PROTEINcoord: 34..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g02010.1Moc07g02010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022618 ribonucleoprotein complex assembly
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome