Moc07g00780 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g00780
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	transcription factor TCP20
Location	chr7: 503511 .. 504224 (-)
RNA-Seq Expression	Moc07g00780
Synteny	Moc07g00780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGAAGCAGCCATCTCCAGCATCAGCATCAGCCACAGCCACAGCCTCGGCCTCGACCTCAGCTCCACCAGATGTCAAAGACTTCAATATTATTTCCCCCAGCCCCAAAACCAAGACCCAACTGGCCCCCAAGCGCACCTCCAACAAGGACCGCCACAAGAAAGTGGACGGCCGCGGCCGCAGAATCCGCATGCCCGCCCTCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAATTGGGCCACAAGACCGACGGCGAGACCATCCAGTGGCTCCTCCACCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCTCCGGCACCGTCCCCGCCTCCGCCCTCCACTCCGCCCCGGCCTCCCTCTCCGCCGACGCCCGCCCCAATTGGCCCAGATCCCATCTCGCCCCTGGCTTCTGGCCTGCCGTCGGGTCGGGTTTCGCCTCCGACCCCAAATTCGGGTTCCATGGATTCGAGTTTCCCGGGATGAATTTCAATTTCCCCACGATTATCGCCGGAGGGAATCAGCAGCTTCCGGGGCTGGAGCTAGGGCTTTCGCAGGAGGGGAATCTCCGGGGGATGTTGAATACGCCGTCGTTTTCCCAAATCTACCACCAATTAGCCCAAAATCGGGACGATTCCGCCGCCCCATTAGAGGACCACCACCACCAACAGCAAGCCCCGGACAAAGACGATTCTCAAGAATCCAGATGA

mRNA sequence

ATGGCAGAGAAGCAGCCATCTCCAGCATCAGCATCAGCCACAGCCACAGCCTCGGCCTCGACCTCAGCTCCACCAGATGTCAAAGACTTCAATATTATTTCCCCCAGCCCCAAAACCAAGACCCAACTGGCCCCCAAGCGCACCTCCAACAAGGACCGCCACAAGAAAGTGGACGGCCGCGGCCGCAGAATCCGCATGCCCGCCCTCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAATTGGGCCACAAGACCGACGGCGAGACCATCCAGTGGCTCCTCCACCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCTCCGGCACCGTCCCCGCCTCCGCCCTCCACTCCGCCCCGGCCTCCCTCTCCGCCGACGCCCGCCCCAATTGGCCCAGATCCCATCTCGCCCCTGGCTTCTGGCCTGCCGTCGGGTCGGGTTTCGCCTCCGACCCCAAATTCGGGTTCCATGGATTCGAGTTTCCCGGGATGAATTTCAATTTCCCCACGATTATCGCCGGAGGGAATCAGCAGCTTCCGGGGCTGGAGCTAGGGCTTTCGCAGGAGGGGAATCTCCGGGGGATGTTGAATACGCCGTCGTTTTCCCAAATCTACCACCAATTAGCCCAAAATCGGGACGATTCCGCCGCCCCATTAGAGGACCACCACCACCAACAGCAAGCCCCGGACAAAGACGATTCTCAAGAATCCAGATGA

Coding sequence (CDS)

ATGGCAGAGAAGCAGCCATCTCCAGCATCAGCATCAGCCACAGCCACAGCCTCGGCCTCGACCTCAGCTCCACCAGATGTCAAAGACTTCAATATTATTTCCCCCAGCCCCAAAACCAAGACCCAACTGGCCCCCAAGCGCACCTCCAACAAGGACCGCCACAAGAAAGTGGACGGCCGCGGCCGCAGAATCCGCATGCCCGCCCTCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAATTGGGCCACAAGACCGACGGCGAGACCATCCAGTGGCTCCTCCACCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCTCCGGCACCGTCCCCGCCTCCGCCCTCCACTCCGCCCCGGCCTCCCTCTCCGCCGACGCCCGCCCCAATTGGCCCAGATCCCATCTCGCCCCTGGCTTCTGGCCTGCCGTCGGGTCGGGTTTCGCCTCCGACCCCAAATTCGGGTTCCATGGATTCGAGTTTCCCGGGATGAATTTCAATTTCCCCACGATTATCGCCGGAGGGAATCAGCAGCTTCCGGGGCTGGAGCTAGGGCTTTCGCAGGAGGGGAATCTCCGGGGGATGTTGAATACGCCGTCGTTTTCCCAAATCTACCACCAATTAGCCCAAAATCGGGACGATTCCGCCGCCCCATTAGAGGACCACCACCACCAACAGCAAGCCCCGGACAAAGACGATTCTCAAGAATCCAGATGA

Protein sequence

MAEKQPSPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPASLSADARPNWPRSHLAPGFWPAVGSGFASDPKFGFHGFEFPGMNFNFPTIIAGGNQQLPGLELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPLEDHHHQQQAPDKDDSQESR

Homology

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BLAST of Moc07g00780 vs. NCBI nr
Match: XP_022148884.1 (transcription factor TCP20 [Momordica charantia])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MAEKQPSPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGR 60
           MAEKQPSPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGR
Sbjct: 1   MAEKQPSPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGR 60

Query: 61  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA 120
           GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA
Sbjct: 61  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA 120

Query: 121 SLSADARPNWPRSHLAPGFWPAVGSGFASDPKFGFHGFEFPGMNFNFPTIIAGGNQQLPG 180
           SLSADARPNWPRSHLAPGFWPAVGSGFASDPKFGFHGFEFPGMNFNFPTIIAGGNQQLPG
Sbjct: 121 SLSADARPNWPRSHLAPGFWPAVGSGFASDPKFGFHGFEFPGMNFNFPTIIAGGNQQLPG 180

Query: 181 LELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPLEDHHHQQQAPDKDDSQESR 238
           LELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPLEDHHHQQQAPDKDDSQESR
Sbjct: 181 LELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPLEDHHHQQQAPDKDDSQESR 237

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BLAST of Moc07g00780 vs. NCBI nr
Match: XP_038876191.1 (transcription factor TCP20-like [Benincasa hispida])

HSP 1 Score: 282.7 bits (722), Expect = 2.9e-72
Identity = 173/275 (62.91%), Postives = 195/275 (70.91%), Query Frame = 0


Query: 5   QPSPASASATATASASTSAPPDVKDFNII----SPSPKTKTQLAPKRTSNKDRHKKVDGR 64
           +PS A+AS+T    +S     D+KDF+II      +     QLAPKRTSNKDRHKKVDGR
Sbjct: 13  KPSVAAASSTPITPSS-----DIKDFSIIISNKDQNNNNNKQLAPKRTSNKDRHKKVDGR 72

Query: 65  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA 124
           GRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASALH+A  
Sbjct: 73  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGV 132

Query: 125 SLS-----------------ADARPNWP-------RSHLA-PGFWPA---VGSGFASD-- 184
           SLS                 A  RPNW        RSH+A  GFWP+   +G+GF S+  
Sbjct: 133 SLSDHDSSVSVSATLTPKIDAVPRPNWAMMGTNLNRSHMATTGFWPSLGGIGTGFVSENP 192

Query: 185 ----PKFGFHGFEFPGMNF---NFPTIIAGGNQQLPGLELGLSQEG-NLRGMLNTPSFSQ 238
               PKFGFHGFEF GMN    NFPTII   +QQ+PGLELGLSQ+G NLRGMLN PS+SQ
Sbjct: 193 GSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQHQQIPGLELGLSQDGNNLRGMLNPPSYSQ 252

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BLAST of Moc07g00780 vs. NCBI nr
Match: XP_008459878.1 (PREDICTED: transcription factor TCP20-like [Cucumis melo] >XP_016902500.1 PREDICTED: transcription factor TCP20-like [Cucumis melo] >KAA0039830.1 transcription factor TCP20-like [Cucumis melo var. makuwa] >TYK24669.1 transcription factor TCP20-like [Cucumis melo var. makuwa])

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-71
Identity = 172/280 (61.43%), Postives = 192/280 (68.57%), Query Frame = 0


Query: 6   PSPASASATATASASTSAPPDVKDFNII----------SPSPKTKTQLAPKRTSNKDRHK 65
           PSPA++S+  T     +   D+KDF +I          S S     QLAPKRTSNKDRHK
Sbjct: 19  PSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSNNNNKQLAPKRTSNKDRHK 78

Query: 66  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASAL 125
           KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASAL
Sbjct: 79  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASAL 138

Query: 126 HSAPASLS-----------------ADARPNW-------PRSHLA-PGFWPA---VGSGF 185
           H+A  SLS                 A  R NW        RSH+A PGFWP+   +G+GF
Sbjct: 139 HAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATPGFWPSLGGIGTGF 198

Query: 186 ASD------PKFGFHGFEFPGMNF---NFPTIIAGGNQQLPGLELGLSQEG-NLRGMLNT 238
            S+      PKFGFHGFEF GMN    NFP +I   +QQ+PGLELGLSQ+G NLRGMLN 
Sbjct: 199 VSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQIPGLELGLSQDGNNLRGMLNP 258

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BLAST of Moc07g00780 vs. NCBI nr
Match: XP_011656799.1 (transcription factor TCP20 [Cucumis sativus] >XP_031743603.1 transcription factor TCP20 [Cucumis sativus] >KGN46444.1 hypothetical protein Csa_005032 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-69
Identity = 169/280 (60.36%), Postives = 189/280 (67.50%), Query Frame = 0


Query: 6   PSPASASATATASASTSAPPDVKDFNII----------SPSPKTKTQLAPKRTSNKDRHK 65
           PSPA++S+  T     +   D+KDF +I          S +     QLAPKRTSNKDRHK
Sbjct: 17  PSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHK 76

Query: 66  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASAL 125
           KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASAL
Sbjct: 77  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASAL 136

Query: 126 HSAPASLS-----------------ADARPNW-------PRSHLA-PGFWPA---VGSGF 185
           H+   SLS                 A  R NW        RSH+A  GFWP+   +G+GF
Sbjct: 137 HAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGF 196

Query: 186 ASD------PKFGFHGFEFPGMNF---NFPTIIAGGNQQLPGLELGLSQEG-NLRGMLNT 238
            S+      PKFGFHGFE  GMN    NFP +I   +QQ+PGLELGLSQ+G NLRGMLN 
Sbjct: 197 VSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNP 256

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BLAST of Moc07g00780 vs. NCBI nr
Match: KAG6576122.1 (Transcription factor TCP20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.3 bits (695), Expect = 3.9e-69
Identity = 172/278 (61.87%), Postives = 191/278 (68.71%), Query Frame = 0


Query: 4   KQPSPASASATATASASTSAPPDVKDFNIISP----SPKTKTQLAPKRTSNKDRHKKVDG 63
           K+PS A+A+A     +S +  P   D  I +P    + K + QLAPKRTSNKDRHKKVDG
Sbjct: 7   KRPSAAAATAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNKDRHKKVDG 66

Query: 64  RGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAP 123
           RGRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASALH+A 
Sbjct: 67  RGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAG 126

Query: 124 ASLS-----------------ADARPNWP-------RSHL-APGFWPA---VGSGFASD- 183
            SLS                 A  R NW        RSH+  PGFWP+   +G GF S+ 
Sbjct: 127 VSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGIGPGFVSEN 186

Query: 184 -----PKFGFHGFEFPGMNF---NFPTIIAG--GNQQLPGLELGLSQEG-NLRGMLNTPS 238
                PKFGFHGFEF GMN    NFPTII      QQ+PGLELGLSQEG N+RGMLN PS
Sbjct: 187 PGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNVRGMLNPPS 246

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BLAST of Moc07g00780 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.2e-50
Identity = 136/283 (48.06%), Postives = 172/283 (60.78%), Query Frame = 0


Query: 12  SATATASASTSAP-PDVKDFNII------SPSPKT--KTQLAPKRTSNKDRHKKVDGRGR 71
           +A+A  S     P  ++KDF I+       P+ K+  + QL PKR+SNKDRH KV+GRGR
Sbjct: 31  AASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGR 90

Query: 72  RIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPAS- 131
           RIRMPALCAAR+FQLTRELGHK+DGETIQWLL QAEPSIIAATGSGT+PASAL S+ A+ 
Sbjct: 91  RIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATS 150

Query: 132 ---------------------LSADARP-NW--------PRSHLAPGFWPAV---GSGF- 191
                                 S+  RP NW         RS L  G WP V   GSG  
Sbjct: 151 NHHQGGSLTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPTGLWPNVAGFGSGVP 210

Query: 192 -------ASDPKFGFHGFEFPGM-NFNFPTIIAGGNQQLPGLELGLSQEGNLRGMLNTPS 237
                   +  + GF GF+FPG+ + +F +I+ G + Q+PGLELGLSQEGN+ G+LN  S
Sbjct: 211 TTGLMSEGAGYRIGFPGFDFPGVGHMSFASILGGNHNQMPGLELGLSQEGNV-GVLNPQS 270

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BLAST of Moc07g00780 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.0e-27
Identity = 75/134 (55.97%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 7   SPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGRGRRIRM 66
           S  S+S+T+ A  ST++ P        +  PK   +  PKRTS KDRH KV+GRGRRIRM
Sbjct: 20  SSTSSSSTSLAIISTTSEP--------NSEPK---KPPPKRTSTKDRHTKVEGRGRRIRM 79

Query: 67  PALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPAS------ALHSAPA 126
           PA+CAARVFQLTRELGHK+DGETI+WLL QAEP++IAATG+GT+PA+      +L S+ +
Sbjct: 80  PAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSRS 139

Query: 127 SLSADARPNWPRSH 135
           SLSA      P S+
Sbjct: 140 SLSAAHLRTTPSSY 142

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BLAST of Moc07g00780 vs. ExPASy Swiss-Prot
Match: Q9LT89 (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 40  KTQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEP 99
           KT+ APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL +AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 100 SIIAATGSGTVPASAL 116
           +II ATG+GTVPA A+
Sbjct: 107 AIIEATGTGTVPAIAV 122

[Close]

BLAST of Moc07g00780 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-26
Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 22  SAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTREL 81
           S PP   + + ++ +  T T    KR S KDRH KVDGRGRRIRMPALCAARVFQLTREL
Sbjct: 36  STPP---EDSTLATTSSTATATTTKR-STKDRHTKVDGRGRRIRMPALCAARVFQLTREL 95

Query: 82  GHKTDGETIQWLLHQAEPSIIAATGSGTVPAS------ALHSAPASLSADARPNWP 132
           GHK+DGETI+WLL QAEP+I+AATG+GT+PA+      +L S+ ++LSA    + P
Sbjct: 96  GHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKSVP 147

[Close]

BLAST of Moc07g00780 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 97/264 (36.74%), Postives = 129/264 (48.86%), Query Frame = 0


Query: 3   EKQPSPASASA------------TATASASTSAPPDVKDFNIISPSPKTKTQLAP----K 62
           ++QPSP+S+S+            +   S S  + P      ++    ++    A     K
Sbjct: 54  QQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLK 113

Query: 63  RTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATG 122
           R S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLL QAEPS+IAATG
Sbjct: 114 RASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATG 173

Query: 123 SGTVPAS------ALHSAPASLSADARPNWPRSHLAPG--FWPAVGSGFASDPKFGFHGF 182
           +GT+PA+      +L S+ +S+S  +      S  +P   F PA+        + G  GF
Sbjct: 174 TGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNIFSPAMLQQQQQQQRGGGVGF 233

Query: 183 EFPGMNFNFPTIIAGGNQQLPGLELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPL 232
             P +    PT     +   PG++              T SF   ++   Q  D  +  L
Sbjct: 234 HHPHLQGRAPT-----SSLFPGID----------NFTPTTSFLNFHNPTKQEGDQDSEEL 293

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BLAST of Moc07g00780 vs. ExPASy TrEMBL
Match: A0A6J1D5D1 (transcription factor TCP20 OS=Momordica charantia OX=3673 GN=LOC111017447 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.8e-127
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MAEKQPSPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGR 60
           MAEKQPSPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGR
Sbjct: 1   MAEKQPSPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGR 60

Query: 61  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA 120
           GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA
Sbjct: 61  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA 120

Query: 121 SLSADARPNWPRSHLAPGFWPAVGSGFASDPKFGFHGFEFPGMNFNFPTIIAGGNQQLPG 180
           SLSADARPNWPRSHLAPGFWPAVGSGFASDPKFGFHGFEFPGMNFNFPTIIAGGNQQLPG
Sbjct: 121 SLSADARPNWPRSHLAPGFWPAVGSGFASDPKFGFHGFEFPGMNFNFPTIIAGGNQQLPG 180

Query: 181 LELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPLEDHHHQQQAPDKDDSQESR 238
           LELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPLEDHHHQQQAPDKDDSQESR
Sbjct: 181 LELGLSQEGNLRGMLNTPSFSQIYHQLAQNRDDSAAPLEDHHHQQQAPDKDDSQESR 237

[Close]

BLAST of Moc07g00780 vs. ExPASy TrEMBL
Match: A0A1S3CAQ4 (transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.2e-71
Identity = 172/280 (61.43%), Postives = 192/280 (68.57%), Query Frame = 0


Query: 6   PSPASASATATASASTSAPPDVKDFNII----------SPSPKTKTQLAPKRTSNKDRHK 65
           PSPA++S+  T     +   D+KDF +I          S S     QLAPKRTSNKDRHK
Sbjct: 19  PSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSNNNNKQLAPKRTSNKDRHK 78

Query: 66  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASAL 125
           KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASAL
Sbjct: 79  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASAL 138

Query: 126 HSAPASLS-----------------ADARPNW-------PRSHLA-PGFWPA---VGSGF 185
           H+A  SLS                 A  R NW        RSH+A PGFWP+   +G+GF
Sbjct: 139 HAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATPGFWPSLGGIGTGF 198

Query: 186 ASD------PKFGFHGFEFPGMNF---NFPTIIAGGNQQLPGLELGLSQEG-NLRGMLNT 238
            S+      PKFGFHGFEF GMN    NFP +I   +QQ+PGLELGLSQ+G NLRGMLN 
Sbjct: 199 VSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQIPGLELGLSQDGNNLRGMLNP 258

[Close]

BLAST of Moc07g00780 vs. ExPASy TrEMBL
Match: A0A5A7T992 (Transcription factor TCP20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002190 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.2e-71
Identity = 172/280 (61.43%), Postives = 192/280 (68.57%), Query Frame = 0


Query: 6   PSPASASATATASASTSAPPDVKDFNII----------SPSPKTKTQLAPKRTSNKDRHK 65
           PSPA++S+  T     +   D+KDF +I          S S     QLAPKRTSNKDRHK
Sbjct: 19  PSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSNNNNKQLAPKRTSNKDRHK 78

Query: 66  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASAL 125
           KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASAL
Sbjct: 79  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASAL 138

Query: 126 HSAPASLS-----------------ADARPNW-------PRSHLA-PGFWPA---VGSGF 185
           H+A  SLS                 A  R NW        RSH+A PGFWP+   +G+GF
Sbjct: 139 HAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATPGFWPSLGGIGTGF 198

Query: 186 ASD------PKFGFHGFEFPGMNF---NFPTIIAGGNQQLPGLELGLSQEG-NLRGMLNT 238
            S+      PKFGFHGFEF GMN    NFP +I   +QQ+PGLELGLSQ+G NLRGMLN 
Sbjct: 199 VSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQIPGLELGLSQDGNNLRGMLNP 258

[Close]

BLAST of Moc07g00780 vs. ExPASy TrEMBL
Match: A0A0A0KC88 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G093640 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 169/280 (60.36%), Postives = 189/280 (67.50%), Query Frame = 0


Query: 6   PSPASASATATASASTSAPPDVKDFNII----------SPSPKTKTQLAPKRTSNKDRHK 65
           PSPA++S+  T     +   D+KDF +I          S +     QLAPKRTSNKDRHK
Sbjct: 17  PSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHK 76

Query: 66  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASAL 125
           KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASAL
Sbjct: 77  KVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASAL 136

Query: 126 HSAPASLS-----------------ADARPNW-------PRSHLA-PGFWPA---VGSGF 185
           H+   SLS                 A  R NW        RSH+A  GFWP+   +G+GF
Sbjct: 137 HAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGF 196

Query: 186 ASD------PKFGFHGFEFPGMNF---NFPTIIAGGNQQLPGLELGLSQEG-NLRGMLNT 238
            S+      PKFGFHGFE  GMN    NFP +I   +QQ+PGLELGLSQ+G NLRGMLN 
Sbjct: 197 VSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNP 256

[Close]

BLAST of Moc07g00780 vs. ExPASy TrEMBL
Match: A0A6J1KQ25 (transcription factor TCP20-like OS=Cucurbita maxima OX=3661 GN=LOC111497669 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 3.2e-69
Identity = 172/274 (62.77%), Postives = 190/274 (69.34%), Query Frame = 0


Query: 4   KQPSPASASATATASASTSAPPDVKDFNIISPS---PKTKTQLAPKRTSNKDRHKKVDGR 63
           K+PSP  AS   T +    A  D+KDFNII  S    K   QLAPKRTSNKDRHKKVDGR
Sbjct: 7   KKPSP-PASTPTTITPPPPASADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDGR 66

Query: 64  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPA 123
           GRRIRMPALCAARVFQLTRELGHKTDGETIQWLL QAEPSIIAATGSGT+PASALH+A  
Sbjct: 67  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGV 126

Query: 124 SLSAD---------------ARPNWP-------RSHLA-PGFWPA---VGSGFASD---- 183
           S+S                 ARPNW        RSH+A  GFWP+   +G+GF S+    
Sbjct: 127 SVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLGGIGTGFVSENSGS 186

Query: 184 --PKFGFHGFEFPGMN---FNFPTIIAGGNQQ-LPGLELGLSQEG-NLRGMLNTPSFSQI 238
             PKFGFHGFEF GMN    NFPTII   +QQ +PGLELGLSQEG NLRGMLN PS+SQI
Sbjct: 187 IMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQI 246

[Close]

BLAST of Moc07g00780 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 198.7 bits (504), Expect = 5.1e-51
Identity = 136/283 (48.06%), Postives = 172/283 (60.78%), Query Frame = 0


Query: 12  SATATASASTSAP-PDVKDFNII------SPSPKT--KTQLAPKRTSNKDRHKKVDGRGR 71
           +A+A  S     P  ++KDF I+       P+ K+  + QL PKR+SNKDRH KV+GRGR
Sbjct: 31  AASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGR 90

Query: 72  RIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPASALHSAPAS- 131
           RIRMPALCAAR+FQLTRELGHK+DGETIQWLL QAEPSIIAATGSGT+PASAL S+ A+ 
Sbjct: 91  RIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATS 150

Query: 132 ---------------------LSADARP-NW--------PRSHLAPGFWPAV---GSGF- 191
                                 S+  RP NW         RS L  G WP V   GSG  
Sbjct: 151 NHHQGGSLTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPTGLWPNVAGFGSGVP 210

Query: 192 -------ASDPKFGFHGFEFPGM-NFNFPTIIAGGNQQLPGLELGLSQEGNLRGMLNTPS 237
                   +  + GF GF+FPG+ + +F +I+ G + Q+PGLELGLSQEGN+ G+LN  S
Sbjct: 211 TTGLMSEGAGYRIGFPGFDFPGVGHMSFASILGGNHNQMPGLELGLSQEGNV-GVLNPQS 270

[Close]

BLAST of Moc07g00780 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 122.9 bits (307), Expect = 3.5e-28
Identity = 75/134 (55.97%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 7   SPASASATATASASTSAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGRGRRIRM 66
           S  S+S+T+ A  ST++ P        +  PK   +  PKRTS KDRH KV+GRGRRIRM
Sbjct: 20  SSTSSSSTSLAIISTTSEP--------NSEPK---KPPPKRTSTKDRHTKVEGRGRRIRM 79

Query: 67  PALCAARVFQLTRELGHKTDGETIQWLLHQAEPSIIAATGSGTVPAS------ALHSAPA 126
           PA+CAARVFQLTRELGHK+DGETI+WLL QAEP++IAATG+GT+PA+      +L S+ +
Sbjct: 80  PAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSRS 139

Query: 127 SLSADARPNWPRSH 135
           SLSA      P S+
Sbjct: 140 SLSAAHLRTTPSSY 142

[Close]

BLAST of Moc07g00780 vs. TAIR 10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 40  KTQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEP 99
           KT+ APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL +AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 100 SIIAATGSGTVPASAL 116
           +II ATG+GTVPA A+
Sbjct: 107 AIIEATGTGTVPAIAV 122

[Close]

BLAST of Moc07g00780 vs. TAIR 10
Match: AT5G51910.2 (TCP family transcription factor )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 40  KTQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLHQAEP 99
           KT+ APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL +AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 100 SIIAATGSGTVPASAL 116
           +II ATG+GTVPA A+
Sbjct: 107 AIIEATGTGTVPAIAV 122

[Close]

BLAST of Moc07g00780 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-27
Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 22  SAPPDVKDFNIISPSPKTKTQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTREL 81
           S PP   + + ++ +  T T    KR S KDRH KVDGRGRRIRMPALCAARVFQLTREL
Sbjct: 36  STPP---EDSTLATTSSTATATTTKR-STKDRHTKVDGRGRRIRMPALCAARVFQLTREL 95

Query: 82  GHKTDGETIQWLLHQAEPSIIAATGSGTVPAS------ALHSAPASLSADARPNWP 132
           GHK+DGETI+WLL QAEP+I+AATG+GT+PA+      +L S+ ++LSA    + P
Sbjct: 96  GHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKSVP 147

The following BLAST results are available for this feature:

BLAST of Moc07g00780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148884.1	1.2e-126	100.00	transcription factor TCP20 [Momordica charantia]	[more]
XP_038876191.1	2.9e-72	62.91	transcription factor TCP20-like [Benincasa hispida]	[more]
XP_008459878.1	2.4e-71	61.43	PREDICTED: transcription factor TCP20-like [Cucumis melo] >XP_016902500.1 PREDIC...	[more]
XP_011656799.1	2.3e-69	60.36	transcription factor TCP20 [Cucumis sativus] >XP_031743603.1 transcription facto...	[more]
KAG6576122.1	3.9e-69	61.87	Transcription factor TCP20, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Moc07g00780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSD5	7.2e-50	48.06	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q9C9L2	5.0e-27	55.97	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
Q9LT89	1.9e-26	77.63	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]
Q9C518	5.5e-26	58.62	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q93Z00	2.1e-25	36.74	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]

BLAST of Moc07g00780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5D1	5.8e-127	100.00	transcription factor TCP20 OS=Momordica charantia OX=3673 GN=LOC111017447 PE=4 S...	[more]
A0A1S3CAQ4	1.2e-71	61.43	transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=...	[more]
A0A5A7T992	1.2e-71	61.43	Transcription factor TCP20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KC88	1.1e-69	60.36	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G093640 PE=4 SV...	[more]
A0A6J1KQ25	3.2e-69	62.77	transcription factor TCP20-like OS=Cucurbita maxima OX=3661 GN=LOC111497669 PE=4...	[more]

BLAST of Moc07g00780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27010.1	5.1e-51	48.06	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G69690.1	3.5e-28	55.97	TCP family transcription factor	[more]
AT5G51910.1	1.3e-27	77.63	TCP family transcription factor	[more]
AT5G51910.2	1.3e-27	77.63	TCP family transcription factor	[more]
AT1G58100.1	3.9e-27	58.62	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 48..120 e-value: 3.6E-29 score: 102.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 50..104 score: 26.629717
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..27
None	No IPR available	PANTHER	PTHR31072:SF138	SUBFAMILY NOT NAMED	coord: 152..227
None	No IPR available	PANTHER	PTHR31072:SF138	SUBFAMILY NOT NAMED	coord: 19..127
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 152..227 coord: 19..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g00780.1	Moc07g00780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity