Moc07g00690 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g00690
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptioncinnamoyl-CoA reductase-like SNL6
Locationchr7: 434244 .. 434876 (-)
RNA-Seq ExpressionMoc07g00690
SyntenyMoc07g00690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGATCCGAGATAGTGGTGGTTGGCCACAGAAAAGCTTCAGTGTATGTGTTGAGGTTTGGTGTTGCCAGAGAATCAGAGAGACATGTTATGCACAGGGCTGCAGATAGTTCAGGGGGATACTTGAAAGAATTAGCAGCATTAATAGTCAGAACAGATCAGGATAATCTGCCATCAGTTCAAGTACAACAGCTGGGAAGTAGAGGAAAGGGAAAGGGGAACAGCTCAGTGAGGTGTTCAACAGATTGTCAGTTTCGAGCCCCGGTTGTCAGACGAATTAATGAGCTGATGAAGTCGTGTAGGCGAAAGAGTGCATTGAGAAAGACTACAGTTGGTGCTGAGGTCGAAGGTGATGTCTCTAGAGTGGCAACAGAATTAGGTGTGAGTGCCAAGTCATCAAGGAAATCTTTCTTCAAAAGTCGTTGGGTGCGAGTGAAGAAGGAAGCATCATGGACCACTTAGTTCGAGTGGGAGCACATGGCTGTGTCTCTAACGTTTGGGAGACATGACCGCGTAGGATTGCTCAGTCTTAGGGCAATCACAGATGGAGCCTTGGTTGGTGCTAAGAAGAAGTTAGAAACTGTCGGTGCAGTGGTAGTTGAGCCTTGGTTGGTTCCAAGAGGATGTTGA

mRNA sequence

ATGAGGGGATCCGAGATAGTGGTGGTTGGCCACAGAAAAGCTTCAGTGTATGTGTTGAGGTTTGGTGTTGCCAGAGAATCAGAGAGACATGTTATGCACAGGGCTGCAGATAGTTCAGGGGGATACTTGAAAGAATTAGCAGCATTAATAGTCAGAACAGATCAGGATAATCTGCCATCAGTTCAAGTACAACAGCTGGGAAGTAGAGGAAAGGGAAAGGGGAACAGCTCAGTGAGGTGTTCAACAGATTGTCAGTTTCGAGCCCCGGTTGTCAGACGAATTAATGAGCTGATGAAGTCGTGTAGGCGAAAGAGTGCATTGAGAAAGACTACAGTTGGTGCTGAGGTCGAAGGTGATGTCTCTAGAGTGGCAACAGAATTAGGATTGCTCAGTCTTAGGGCAATCACAGATGGAGCCTTGGTTGGTGCTAAGAAGAAGTTAGAAACTGTCGGTGCAGTGGTAGTTGAGCCTTGGTTGGTTCCAAGAGGATGTTGA

Coding sequence (CDS)

ATGAGGGGATCCGAGATAGTGGTGGTTGGCCACAGAAAAGCTTCAGTGTATGTGTTGAGGTTTGGTGTTGCCAGAGAATCAGAGAGACATGTTATGCACAGGGCTGCAGATAGTTCAGGGGGATACTTGAAAGAATTAGCAGCATTAATAGTCAGAACAGATCAGGATAATCTGCCATCAGTTCAAGTACAACAGCTGGGAAGTAGAGGAAAGGGAAAGGGGAACAGCTCAGTGAGGTGTTCAACAGATTGTCAGTTTCGAGCCCCGGTTGTCAGACGAATTAATGAGCTGATGAAGTCGTGTAGGCGAAAGAGTGCATTGAGAAAGACTACAGTTGGTGCTGAGGTCGAAGGTGATGTCTCTAGAGTGGCAACAGAATTAGGATTGCTCAGTCTTAGGGCAATCACAGATGGAGCCTTGGTTGGTGCTAAGAAGAAGTTAGAAACTGTCGGTGCAGTGGTAGTTGAGCCTTGGTTGGTTCCAAGAGGATGTTGA

Protein sequence

MRGSEIVVVGHRKASVYVLRFGVARESERHVMHRAADSSGGYLKELAALIVRTDQDNLPSVQVQQLGSRGKGKGNSSVRCSTDCQFRAPVVRRINELMKSCRRKSALRKTTVGAEVEGDVSRVATELGLLSLRAITDGALVGAKKKLETVGAVVVEPWLVPRGC
Homology
[Close]
BLAST of Moc07g00690 vs. NCBI nr
Match: XP_022152155.1 (cinnamoyl-CoA reductase-like SNL6 [Momordica charantia])

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-09
Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 0 

Query: 6   IVVVGHRKASVYVLRFGVARESERHVMHR-AADSSGGYLKELAALIVRTDQDNLPSVQVQ 65
           +V  GH+++ VYV  F VA+ S R  MH+  A  S  YL+  AAL+ +TDQ NLPS QV+
Sbjct: 2   VVATGHKRSYVYVSEFEVAKGSLRQTMHKVVAYGSRRYLRRPAALMAKTDQKNLPSPQVK 61

Query: 66  QLGSRGKGKGNSSVRCSTDCQFRAPVVRRINELMKSCRRKSALRKTTVGAEVEGDVSRVA 125
           QL S  KG  N         +     VR + EL+KS RR SAL+ T       G +S VA
Sbjct: 62  QLRSTKKGNEN-----LIGHRVHTSAVRCLGELVKSHRRISALKGT-------GSISSVA 112

Query: 126 TEL 128
           T L
Sbjct: 122 TYL 112

[Close]
BLAST of Moc07g00690 vs. NCBI nr
Match: XP_022157059.1 (uncharacterized protein LOC111023870 [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-05
Identity = 48/103 (46.60%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 27  SERHVMHR-AADSSGGYLKELAALIVRTDQDNLPSVQVQQLGSRGKGKGNSSVRCSTDCQ 86
           S R  MHR A DSSG  LK    L+ RTDQ NLPS  V+QL S  KG  N         Q
Sbjct: 54  SLRQTMHRVATDSSGRDLKGPTTLMARTDQKNLPSAHVKQLRSTEKGNEN-----LIGHQ 113

Query: 87  FRAPVVRRINELMKSCRRKSALRKTTVGAEVEGDVSRVATELG 129
                VRR  EL+KS RR SA + T       G VS V T+LG
Sbjct: 114 VHTSAVRRSGELVKSHRRISAFKGT-------GFVSSVVTDLG 144

[Close]
BLAST of Moc07g00690 vs. ExPASy TrEMBL
Match: A0A6J1DD48 (cinnamoyl-CoA reductase-like SNL6 OS=Momordica charantia OX=3673 GN=LOC111019944 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 0 

Query: 6   IVVVGHRKASVYVLRFGVARESERHVMHR-AADSSGGYLKELAALIVRTDQDNLPSVQVQ 65
           +V  GH+++ VYV  F VA+ S R  MH+  A  S  YL+  AAL+ +TDQ NLPS QV+
Sbjct: 2   VVATGHKRSYVYVSEFEVAKGSLRQTMHKVVAYGSRRYLRRPAALMAKTDQKNLPSPQVK 61

Query: 66  QLGSRGKGKGNSSVRCSTDCQFRAPVVRRINELMKSCRRKSALRKTTVGAEVEGDVSRVA 125
           QL S  KG  N         +     VR + EL+KS RR SAL+ T       G +S VA
Sbjct: 62  QLRSTKKGNEN-----LIGHRVHTSAVRCLGELVKSHRRISALKGT-------GSISSVA 112

Query: 126 TEL 128
           T L
Sbjct: 122 TYL 112

[Close]
BLAST of Moc07g00690 vs. ExPASy TrEMBL
Match: A0A6J1DVE9 (uncharacterized protein LOC111023870 OS=Momordica charantia OX=3673 GN=LOC111023870 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.8e-06
Identity = 48/103 (46.60%), Postives = 53/103 (51.46%), Query Frame = 0 

Query: 27  SERHVMHR-AADSSGGYLKELAALIVRTDQDNLPSVQVQQLGSRGKGKGNSSVRCSTDCQ 86
           S R  MHR A DSSG  LK    L+ RTDQ NLPS  V+QL S  KG  N         Q
Sbjct: 54  SLRQTMHRVATDSSGRDLKGPTTLMARTDQKNLPSAHVKQLRSTEKGNEN-----LIGHQ 113

Query: 87  FRAPVVRRINELMKSCRRKSALRKTTVGAEVEGDVSRVATELG 129
                VRR  EL+KS RR SA + T       G VS V T+LG
Sbjct: 114 VHTSAVRRSGELVKSHRRISAFKGT-------GFVSSVVTDLG 144

The following BLAST results are available for this feature:
BLAST of Moc07g00690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152155.12.4e-0943.09cinnamoyl-CoA reductase-like SNL6 [Momordica charantia][more]
XP_022157059.11.6e-0546.60uncharacterized protein LOC111023870 [Momordica charantia][more]
BLAST of Moc07g00690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc07g00690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DD481.2e-0943.09cinnamoyl-CoA reductase-like SNL6 OS=Momordica charantia OX=3673 GN=LOC111019944... [more]
A0A6J1DVE97.8e-0646.60uncharacterized protein LOC111023870 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Moc07g00690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g00690.1Moc07g00690.1mRNA