Moc07g00500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g00500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr7: 289744 .. 290736 (+)
RNA-Seq Expression	Moc07g00500
Synteny	Moc07g00500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATTGAATAATGAGCTAAAGAAAATAAGATACGAGATTCAAGAACAGGTCATGGAGGTGCATGATGTAGAGCTAAAGAAGATGAGACAAGACATCGATAAGATTCAGGGGCAAGTTAAAGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGGGGACATTTCTCAACCTAACAATTTAGTCGAACCTCATAATAATTCATCACCTAGGGTGGACCCACCTCTTTGTCAACCACCAGAGAGTTTCCCCCAGCATAATTCATTACATGAAGTTCAGCTTTCCAAGAAAGGCCAACAAGCTCCTACAAACTGTCAGGTTGAATTTACATTCCAAGATGGACAAACATCAAATGCCAATTACTCAGATAATTTAAAAGGTAGAGGAAATGTTACCAATGGAAATGCTGAAGAAACTGGGGAAGTTTCTTTTCTAAATCAATACAAGCATGACATAGGTATGACCCATGCTGAGTAGATAATAGAAAAAGAAACTGCAGGAAAAGAAAGTGCACGGAGATGGAGAGAGGCAAACGAACAACTGTCAGTGCTTTTAATTGATAAAGAGCCACATAGTAAAAACTCTATTAAAAGGAAAAATAAAGTCCAGACAATAATCTCGAAGCACAAGTGGAGGCACCAACAAGGATTTATGGTATACAATCCGTCTACAGTACCCATAAACTCATTGGCTCTGTAGAATGGCCCACATCCAAGTTTGCCAGCATTTCCTGAAAATCATAGTAGTCGGAGACAACTAAAGCGAGAGAGCTTTAATCCGATCCCAACATCCTATTCCGAGTTGTTATCCCAATTATTTCAAGGTAATCTATTAGCTCCCGTAGCCGTAGAGTCATTACAACCACCTTATCTAAAGTGATACGACTCGCATGTTCATTGTGATTACCATGCAGGAGCTGTAGGTCATTCAACTGAGAACTGTACTTCACTGAAGCATAAAGTGCAAGTTCTAATGAAGGCAGGATGA

mRNA sequence

ATGGAAGAATTGAATAATGAGCTAAAGAAAATAAGATACGAGATTCAAGAACAGGTCATGGAGGTGCATGATGTAGAGCTAAAGAAGATGAGACAAGACATCGATAAGATTCAGGGGCAAGTTAAAGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGGGGACATTTCTCAACCTAACAATTTAGTCGAACCTCATAATAATTCATCACCTAGGGTGGACCCACCTCTTTGTCAACCACCAGAGAGTTTCCCCCAGCATAATTCATTACATGAAGTTCAGCTTTCCAAGAAAGGCCAACAAGCTCCTACAAACTGTCAGGTTGAATTTACATTCCAAGATGGACAAACATCAAATGCCAATTACTCAGATAATTTAAAAGGTAGAGGAAATGTTACCAATGGAAATGCTGAAGAAACTGGGGAAGTTTCTTTTCTAAATCAATACAAGCATGACATAGGAGCTGTAGGTCATTCAACTGAGAACTGTACTTCACTGAAGCATAAAGTGCAAGTTCTAATGAAGGCAGGATGA

Coding sequence (CDS)

ATGGAAGAATTGAATAATGAGCTAAAGAAAATAAGATACGAGATTCAAGAACAGGTCATGGAGGTGCATGATGTAGAGCTAAAGAAGATGAGACAAGACATCGATAAGATTCAGGGGCAAGTTAAAGAAATTTTCAATGTCTTAAAGAATATTGTTACAGTTGGGGACATTTCTCAACCTAACAATTTAGTCGAACCTCATAATAATTCATCACCTAGGGTGGACCCACCTCTTTGTCAACCACCAGAGAGTTTCCCCCAGCATAATTCATTACATGAAGTTCAGCTTTCCAAGAAAGGCCAACAAGCTCCTACAAACTGTCAGGTTGAATTTACATTCCAAGATGGACAAACATCAAATGCCAATTACTCAGATAATTTAAAAGGTAGAGGAAATGTTACCAATGGAAATGCTGAAGAAACTGGGGAAGTTTCTTTTCTAAATCAATACAAGCATGACATAGGAGCTGTAGGTCATTCAACTGAGAACTGTACTTCACTGAAGCATAAAGTGCAAGTTCTAATGAAGGCAGGATGA

Protein sequence

MEELNNELKKIRYEIQEQVMEVHDVELKKMRQDIDKIQGQVKEIFNVLKNIVTVGDISQPNNLVEPHNNSSPRVDPPLCQPPESFPQHNSLHEVQLSKKGQQAPTNCQVEFTFQDGQTSNANYSDNLKGRGNVTNGNAEETGEVSFLNQYKHDIGAVGHSTENCTSLKHKVQVLMKAG

Homology

[Close]

BLAST of Moc07g00500 vs. NCBI nr
Match: XP_022153553.1 (uncharacterized protein LOC111021029 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-47
Identity = 118/178 (66.29%), Postives = 131/178 (73.60%), Query Frame = 0


Query: 1   MEELNNELKKIRYEIQEQVMEVHDVELKKMRQDIDKIQGQVKEIFNVLKNIVTVGDISQP 60
           +EELN ELKKIR EIQEQVMEV +VELKKMRQDID IQ QV +I NVLKNIVTVG  SQP
Sbjct: 20  IEELNIELKKIRDEIQEQVMEVQNVELKKMRQDIDNIQKQVMKILNVLKNIVTVGGTSQP 79

Query: 61  NNLVEPHNNSSPRVDPPLCQPPESFPQHNSLHEVQLSKKGQQAPTNCQVEFTFQDGQTSN 120
           NNLVEP+NNSSPRVDPPLCQ  E FPQH+S H+ QLSKKGQQ PTNCQVEFTF+D QT  
Sbjct: 80  NNLVEPYNNSSPRVDPPLCQSKEGFPQHSSSHDAQLSKKGQQVPTNCQVEFTFKDEQTPK 139

Query: 121 ANYSDNLKG--RGNVTN--GNAEETGEVSFLNQYKHDIGAVGHSTENCTSLKHKVQVL 175
            NYSDNLKG  + NVT   G A E   V  +N+         H   N +S+K K +VL
Sbjct: 140 VNYSDNLKGEEKENVTQRWGKAIEQLPVPLINKEP-------HPKMNKSSIKRKNKVL 190

[Close]

BLAST of Moc07g00500 vs. NCBI nr
Match: XP_022143515.1 (uncharacterized protein LOC111013388 [Momordica charantia])

HSP 1 Score: 115.2 bits (287), Expect = 6.0e-22
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1   MEELNNELKKIRYEIQEQVMEVHDVELKKMRQDIDKIQGQVKEIFNVLKNIVTVGDISQP 60
           +EELN ELK+IR EIQE V EVH+VELKKMRQDIDKIQGQV  I NVLK IVTVGDISQP
Sbjct: 65  IEELNXELKEIRDEIQEHVXEVHNVELKKMRQDIDKIQGQVTGILNVLKKIVTVGDISQP 124

Query: 61  NNLVEPHNNSSPRVDPPL 79
           NNLVEPHNNSS RV P L
Sbjct: 125 NNLVEPHNNSSLRVGPSL 142

[Close]

BLAST of Moc07g00500 vs. ExPASy TrEMBL
Match: A0A6J1DHS7 (uncharacterized protein LOC111021029 OS=Momordica charantia OX=3673 GN=LOC111021029 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.2e-48
Identity = 118/178 (66.29%), Postives = 131/178 (73.60%), Query Frame = 0


Query: 1   MEELNNELKKIRYEIQEQVMEVHDVELKKMRQDIDKIQGQVKEIFNVLKNIVTVGDISQP 60
           +EELN ELKKIR EIQEQVMEV +VELKKMRQDID IQ QV +I NVLKNIVTVG  SQP
Sbjct: 20  IEELNIELKKIRDEIQEQVMEVQNVELKKMRQDIDNIQKQVMKILNVLKNIVTVGGTSQP 79

Query: 61  NNLVEPHNNSSPRVDPPLCQPPESFPQHNSLHEVQLSKKGQQAPTNCQVEFTFQDGQTSN 120
           NNLVEP+NNSSPRVDPPLCQ  E FPQH+S H+ QLSKKGQQ PTNCQVEFTF+D QT  
Sbjct: 80  NNLVEPYNNSSPRVDPPLCQSKEGFPQHSSSHDAQLSKKGQQVPTNCQVEFTFKDEQTPK 139

Query: 121 ANYSDNLKG--RGNVTN--GNAEETGEVSFLNQYKHDIGAVGHSTENCTSLKHKVQVL 175
            NYSDNLKG  + NVT   G A E   V  +N+         H   N +S+K K +VL
Sbjct: 140 VNYSDNLKGEEKENVTQRWGKAIEQLPVPLINKEP-------HPKMNKSSIKRKNKVL 190

[Close]

BLAST of Moc07g00500 vs. ExPASy TrEMBL
Match: A0A6J1CP05 (uncharacterized protein LOC111013388 OS=Momordica charantia OX=3673 GN=LOC111013388 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.9e-22
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1   MEELNNELKKIRYEIQEQVMEVHDVELKKMRQDIDKIQGQVKEIFNVLKNIVTVGDISQP 60
           +EELN ELK+IR EIQE V EVH+VELKKMRQDIDKIQGQV  I NVLK IVTVGDISQP
Sbjct: 65  IEELNXELKEIRDEIQEHVXEVHNVELKKMRQDIDKIQGQVTGILNVLKKIVTVGDISQP 124

Query: 61  NNLVEPHNNSSPRVDPPL 79
           NNLVEPHNNSS RV P L
Sbjct: 125 NNLVEPHNNSSLRVGPSL 142

The following BLAST results are available for this feature:

BLAST of Moc07g00500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153553.1	1.1e-47	66.29	uncharacterized protein LOC111021029 [Momordica charantia]	[more]
XP_022143515.1	6.0e-22	82.05	uncharacterized protein LOC111013388 [Momordica charantia]	[more]

BLAST of Moc07g00500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g00500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHS7	5.2e-48	66.29	uncharacterized protein LOC111021029 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1CP05	2.9e-22	82.05	uncharacterized protein LOC111013388 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Moc07g00500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g00500.1	Moc07g00500.1	mRNA