Moc07g00350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc07g00350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr7: 189085 .. 191768 (-)
RNA-Seq Expression	Moc07g00350
Synteny	Moc07g00350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCGAGTCTTGAGGCCAAGTCCTAAAGTTAGGCGTGCGAAGGTCCGTGGGTGGGATAGCTCATTGCTAGTGTGCAATTTCTGTATTCAATCTGATGCACGATTATTTACAAACTGGTCAGTTGAGGACTACTCTTCTATCAATAGAGTAATTTTAATTCATTAATAAAGTGTAATTGGATCTTTTTTATCCATTGATTTTAACATTTTATGTTAAAAAAAAATCGATTTTAGCATTTAATGACAACAATCACTTGGAAAAAAATTGATACATAAGAGATGAAATGAAAACTTTAAAAATATGCGAAACATATATTTAACCATTGATTTAAATCATATATCCCAAATCACATATCCAGCCTTTTTTAGCCACGTCTATATAGATACGTTTTTTTTTCCTGGTAAAAATGTGCCTTACTTTGTCAATAAGTTTTCCTATAATTTTATAAAATAAACTATAAAAACAAGAATACATAATCTACCTGTGTCTTTCGCGACGTCTACATGTATATCATATCCACAAGATTCATTTTGTTTTCAGTCATTGAATATTAGTTGCTGGATTACCCATTGGCGATTATTCAATTAGTTAAAATTTTAATTTTGAAAAATATATTTAATTAAAAATTTTGCAACTCAGATTTGGTCCGAAGGTTTATGATTCATGTAGTGTATAAAATGTGGGGCACAGCATTAAAACGCGTACCCTAAAGTTATACAATTTGATAAATTCGCGTAACAATACGTAATGGATACACATGATCTAATGGTTTGAATCTCCTCTATATCTCTATTCAATTGTATCATTATATTGAAAGAAATGGGGGACTGTTCTGATCTCATAATTAGATCTTAAAAAGTACACACTAGCTATTATTTAGATATTGTCTTCTGAGAAATTAAATAAATACAACACAAAGATCTATATATATATATATATATTTACTTTATTGAGAGAGAGAGAGAGAGAGGAAAATGATAGTATATTAAAGAAGAATGCAGGTGGTATATATATAGGTAGGCTAGCAACAGGCATAGGGAACACTTGTTCGCTTTTCTTTCACAAATTAAAAAAGAAGGAAAAGAGAGAGCTTTTTCTTTCCGTCCAATTCCATCACCATTCAACTGCGCGCTTTTAGTTTGGTTCATTGTATGTCAAACTAAAAGCTGAAAACCAGGAGAGAAAAAGAAAACAGCTTCACATGTGCCCAACTAAATAACACCCACTACAACAATTGTAGGATTCAGCGACCAAACTAAGCGCCGAAAACGTTTTTGTCGCTAGAAAAGCGACGAAAACGTGTTTCGTCGCATAGGTAGTGACGAAAAGCGATTTCGTTGCTTAAAAAAACGACGAAACGATATTGCCTAACGATTAAACGGAATCACACGAGTTCGAGGGCAAACTCGTGTCGAATTCTTGTTACGAGTCGTAAATCGAGTTGGAAAAATCAAGCTCGAATGGACGGAGCAACATGGTAGACTAGTTGGACCTGAGTCAACTTTGTTTAACAGTGAGATAGACTTTTTGGCACGCAACCATATTGATGTGAATTGTGCAAAGAAAAAAGAGATAACGGTGCTAGAGATTAATAAAATCATTCAGATGTTACTAGTAACCATTTTTTTATGTTGTATTTGTTGGCCACTAATAATCGAATATGTTGTTAACTGGTCATTCTGTAGGAGAAGTTTGTTGTGATATATCTCAGCTACATGTGCATAGATACATTTTATACGAGATTGGAACTCGATTCAAAGATTATCGAGCTAAACTACATTGTCATTACAAAAAGGTACGTGATCCAACACGTTCTCACCAAAAGCCGTATAAAGAGATAAAACAAGAAGATTGGAACATATTATGTGATAGCTAGATGGGAATCTCCGGCATGGAAGGTAACTATATGATCTTAATTCTTTGTTATCATTTTATAAAATTCGTTTCTTAACTAAACATGTAAATTTGTAGAAAAAATCTGCCAAAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTGGAGCAAAACCATTTCAGTGTCATCGGGAAGATTCGGTATGAACCAAATAATTGATTTGTTGTATTGCATACTTTAGATTTTAGGTTCTTACTATTTTTACTACAACTTAACAATCTTTTTGAATAGAGAAAAGAAGATGGGACATATTTAAGTTCATTCATATAATCTTCAATATGCATTACTCCGAAGAAAAAGGTTGGATTAATGAGGAAGCAGGAATTCATATGTAAGTATTCGTATAATTTTGTCATACGTAACAGATTGATGTAAGATATATATATATATCTTAAAGCTTTTAACTACACATTTTTTTTTTCAGGAAGAAATGATTACCTTAAAAGCGTATCACGCTTCTCAAGGAGGTCAAAAAACAGAAGAAGAAATAATGGAGACAATCCTTGGGAGAAGATCGAACTATATAATAGGAATGAGATATGGACCGAAGCTCACCAGAAATAAAGGATCATCATCAAAATACCCTGATGAATATGTGGAGTCATTAGAGTCTCGTCTTCAGAAGCATGAGGAAGAATTGACAGCTCAACAAAAGGCGAACGAAGACCAACAAATGGCCGCCCAAGAACAAATACAGAAAGCATTATTGGAGGCCCAAAGTCAGGAGTTTAATAGGAAACTTCTCGAATGCAACTAA

mRNA sequence

ATGTTGCGAGTCTTGAGGCCAAGTCCTAAAGTTAGGCGTGCGAAGGTCCGTGGGTGGGATAGCTCATTGCTAGTGTGCAATTTCTGTATTCAATCTGATGCACGATTATTTACAAACTGGTCAGTTGAGGACTACTCTTCTATCAATAGAGAAGAAATGATTACCTTAAAAGCGTATCACGCTTCTCAAGGAGGTCAAAAAACAGAAGAAGAAATAATGGAGACAATCCTTGGGAGAAGATCGAACTATATAATAGGAATGAGATATGGACCGAAGCTCACCAGAAATAAAGGATCATCATCAAAATACCCTGATGAATATGTGGAGTCATTAGAGTCTCGTCTTCAGAAGCATGAGGAAGAATTGACAGCTCAACAAAAGGCGAACGAAGACCAACAAATGGCCGCCCAAGAACAAATACAGAAAGCATTATTGGAGGCCCAAAGTCAGGAGTTTAATAGGAAACTTCTCGAATGCAACTAA

Coding sequence (CDS)

ATGTTGCGAGTCTTGAGGCCAAGTCCTAAAGTTAGGCGTGCGAAGGTCCGTGGGTGGGATAGCTCATTGCTAGTGTGCAATTTCTGTATTCAATCTGATGCACGATTATTTACAAACTGGTCAGTTGAGGACTACTCTTCTATCAATAGAGAAGAAATGATTACCTTAAAAGCGTATCACGCTTCTCAAGGAGGTCAAAAAACAGAAGAAGAAATAATGGAGACAATCCTTGGGAGAAGATCGAACTATATAATAGGAATGAGATATGGACCGAAGCTCACCAGAAATAAAGGATCATCATCAAAATACCCTGATGAATATGTGGAGTCATTAGAGTCTCGTCTTCAGAAGCATGAGGAAGAATTGACAGCTCAACAAAAGGCGAACGAAGACCAACAAATGGCCGCCCAAGAACAAATACAGAAAGCATTATTGGAGGCCCAAAGTCAGGAGTTTAATAGGAAACTTCTCGAATGCAACTAA

Protein sequence

MLRVLRPSPKVRRAKVRGWDSSLLVCNFCIQSDARLFTNWSVEDYSSINREEMITLKAYHASQGGQKTEEEIMETILGRRSNYIIGMRYGPKLTRNKGSSSKYPDEYVESLESRLQKHEEELTAQQKANEDQQMAAQEQIQKALLEAQSQEFNRKLLECN

Homology

[Close]

BLAST of Moc07g00350 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 7.5e-32
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 51  EEMITLKAYHASQGGQKTEEEIMETILGRRSNYIIGMRYGPKLTRNKGSSSKYPDEYVES 110
           EEMITLKAYHASQG +KTEEEIMET+LG+RSNY+IGM YGPK TRNKGSSSKY DEYVES
Sbjct: 110 EEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVES 169

Query: 111 LESRLQKHEEELTAQQKANEDQQMAAQEQIQKALLEAQSQEFNRKLLE 159
           LE+RLQKHEEE+              QEQIQKA LEAQSQEFNRKLLE
Sbjct: 170 LEARLQKHEEEMA----------RTTQEQIQKA-LEAQSQEFNRKLLE 206

[Close]

BLAST of Moc07g00350 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 7.5e-32
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 51  EEMITLKAYHASQGGQKTEEEIMETILGRRSNYIIGMRYGPKLTRNKGSSSKYPDEYVES 110
           EEMITLKAYHASQG +KTEEEIMET+LG+RSNY+IGM YGPK TRNKGSSSKY DEYVES
Sbjct: 105 EEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVES 164

Query: 111 LESRLQKHEEELTAQQKANEDQQMAAQEQIQKALLEAQSQEFNRKLLE 159
           LE+RLQKHEEE+              QEQIQKA LEAQSQEFNRKLLE
Sbjct: 165 LEARLQKHEEEMA----------RTTQEQIQKA-LEAQSQEFNRKLLE 201

[Close]

BLAST of Moc07g00350 vs. NCBI nr
Match: XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-10
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 51  EEMITLKAYHASQGGQKTEEEIMETILGRRSNYIIGMRYGPK 93
           EEMITLKA HASQG +KTEEEIMET+LGRRSNYIIGM YGPK
Sbjct: 105 EEMITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPK 146

[Close]

BLAST of Moc07g00350 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 51  EEMITLKAYHASQGGQKTEEEIMETILGRRSNYIIGMRYGPKLTRNKGSSSKYPDEYVES 110
           EEMITLKAYHASQG +KTEEEIMET+LG+RSNY+IGM YGPK TRNKGSSSKY DEYVES
Sbjct: 105 EEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVES 164

Query: 111 LESRLQKHEEELTAQQKANEDQQMAAQEQIQKALLEAQSQEFNRKLLE 159
           LE+RLQKHEEE+              QEQIQKA LEAQSQEFNRKLLE
Sbjct: 165 LEARLQKHEEEMA----------RTTQEQIQKA-LEAQSQEFNRKLLE 201

[Close]

BLAST of Moc07g00350 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 51  EEMITLKAYHASQGGQKTEEEIMETILGRRSNYIIGMRYGPKLTRNKGSSSKYPDEYVES 110
           EEMITLKAYHASQG +KTEEEIMET+LG+RSNY+IGM YGPK TRNKGSSSKY DEYVES
Sbjct: 110 EEMITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVES 169

Query: 111 LESRLQKHEEELTAQQKANEDQQMAAQEQIQKALLEAQSQEFNRKLLE 159
           LE+RLQKHEEE+              QEQIQKA LEAQSQEFNRKLLE
Sbjct: 170 LEARLQKHEEEMA----------RTTQEQIQKA-LEAQSQEFNRKLLE 206

[Close]

BLAST of Moc07g00350 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.0e-11
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 51  EEMITLKAYHASQGGQKTEEEIMETILGRRSNYIIGMRYGPK 93
           EEMITLKA HASQG +KTEEEIMET+LGRRSNYIIGM YGPK
Sbjct: 105 EEMITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPK 146

The following BLAST results are available for this feature:

BLAST of Moc07g00350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148911.1	7.5e-32	76.85	uncharacterized protein LOC111017461 [Momordica charantia]	[more]
XP_022143616.1	7.5e-32	76.85	uncharacterized protein LOC111013476 [Momordica charantia]	[more]
XP_022153681.1	1.2e-10	88.10	uncharacterized protein LOC111021138 [Momordica charantia]	[more]

BLAST of Moc07g00350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc07g00350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQT5	3.6e-32	76.85	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1D6S9	3.6e-32	76.85	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DLF1	6.0e-11	88.10	uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Moc07g00350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc07g00350.1	Moc07g00350.1	mRNA