Moc07g00090 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g00090
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr7: 37231 .. 38918 (-)
RNA-Seq ExpressionMoc07g00090
SyntenyMoc07g00090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTCCGTAAGTTTGTTATTTCGGATCTTCCTTTAATGGCGAATCCCCGTCCTCCACGTGGTAGTGAGATTTTTTCCTCCACGAAAATTGGCCCCTTATCTGCCAGGTTTGATCTCGACCTAGCAGAGAAGTTTTCATTTGGAGAATCGATCCACGTGGGGACTTCTAATGCCGTTATGGTGATTATTACCGTTGGGGAGTCTCCAAAATGGAACTGTCATTCGGCGCGCACTCGAGTACCATTGACGTTCGGGCTTCCTCCGATCTGGGTTGTCCTTTCTTGGACACGTGTATGATCGGGACCAAACTTCAGGGTACTATAAATACTCCCAAAGTTTCATTTCCGCTTTTTACGTTTCCTGAAATCTTGGAGTCCGACCTGAGCAGTTCAGAACTTACTCTAGGTCAATTCTGCACTTTTTTGTTTTTCTTCATAAATTTCTTTTTTTTTTCGAGTCATGTCTAGCTCTTCTGCTTCTTCAAGTTCTTCTAATTCTTTTGATGGGGTAGATCGGTGTCGGAGCCCTTCGCAGGAGAAGGCCGACTCTGTCGAGGAATTATTTAGCAGGTTAGATTCTGAGTTAGAGGAGGAGATAGATAATTTTAGGTTTCCCGAGGAGGATGGAGACGATAATGACACCTTCACCTCGGGCCAGGGTTTAGAATTCCCCTCTTATATGCCTGAAAGTTATATAGGTTTTCTGCGTAAAAGATATAACATTCCGGATGATATCATTCTCAGGCTCTTTAAGGAAGGGGAATGAGTAGATAATCCTCTAGAGGGGTGCATGATATTATATTTGAAAATGTTTGAATATGGCTTCTGCCTGCCCGTTCACCCCCTAGCACAAGAGTTCCTAGTCCGAACTAGACTTGCTCCTGCCCAAGTGGCCCCCAACGGATGGGGTGTAGTCTTTAGCTTAGTCGTGCTGTTTTGGCTAAGATGTAGGGAGGTGGACGAGTTAGATCTCCTTAGGGGCGACCGACTCTTAGCTTGTTTCGAAGTTAAACGGATTTCTAGGAAGCCGGGGCGATATTACTTATGTGCTAGGAAGGGCGCATGAGGCATCCTCAAAGCCCCAACCTCTATAAAGAATTTTTGGGTTGGAAAGTGGTTCTTCGCCTCTGGAGCGTGGTTAGCCAAGGATGAGTCCGACCAGCCCTTCCGGAACGTCCCCTGTAGGTTTAGGAACTTAGGTAAGGAGTAGGGTCTTTGCTTGCTTTTAACTATTCATTTTCGTGCTCTGACCCTTGACTTTTGCTTCTTCAGTTGCTCTTCTGCCTGTTCCTCAGCTTTCTCAGTCCACTTTCGAAATTCTGAAAGTTTACAAGGATAAGTTCAAGAGCGGTGGGAAAATCAGCAACTTATTGACCGACAAGCTTCTTTTAGCTTCTGGTCTACTCGACTACAACCCACTACTCGTTCCTCTTGAGGCCCACAGGCCCAATTCAGAGCTCGGTAAGTTGTGCTCGAACCTAAATTGTGGGTATTTTAGATTTTAACATTCGGTTGGATCGGTTGATTTTAAATTTGAATCTTCCCACAATAATGGTTTGCGGATTCTCCCAAGGCGTGAAACGAAAGCGCCCCAGTCAAGGGGTTGCTTTTACCTCCAAGAAAGCGCCTACCCCTGTAGCTATTGACCTTCCTGTCGAGGTCGAGGTGGTGGAGGTCCACCAATAG

mRNA sequence

ATGGAGCTCCGTAAGTTTGTTATTTCGGATCTTCCTTTAATGGCGAATCCCCGTCCTCCACGTGGTAGTGAGATTTTTTCCTCCACGAAAATTGGCCCCTTATCTGCCAGGTTTGATCTCGACCTAGCAGAGAAGTTTTCATTTGGAGAATCGATCCACGTGGGGACTTCTAATGCCGTTATGGTGATTATTACCGTTGGGGAGTCTCCAAAATGGAACTGTCATTCGGCGCGCACTCGAGGTACTATAAATACTCCCAAAGTTTCATTTCCGCTTTTTACGTTTCCTGAAATCTTGGAGTCCGACCTGAGCAGTTCAGAACTTACTCTAGATCGGTGTCGGAGCCCTTCGCAGGAGAAGGCCGACTCTGTCGAGGAATTATTTAGCAGGTTAGATTCTGAGTTAGAGGAGGAGATAGATAATTTTAGGTTTCCCGAGGAGGATGGAGACGATAATGACACCTTCACCTCGGGCCAGGGTTTAGAATTCCCCTCTTATATGCCTGAAAGTTATATAGTTGCTCTTCTGCCTGTTCCTCAGCTTTCTCAGTCCACTTTCGAAATTCTGAAAGTTTACAAGGATAAGTTCAAGAGCGGTGGGAAAATCAGCAACTTATTGACCGACAAGCTTCTTTTAGCTTCTGGTCTACTCGACTACAACCCACTACTCGTTCCTCTTGAGGCCCACAGGCCCAATTCAGAGCTCGGCGTGAAACGAAAGCGCCCCAGTCAAGGGGTTGCTTTTACCTCCAAGAAAGCGCCTACCCCTGTAGCTATTGACCTTCCTGTCGAGGTCGAGGTGGTGGAGGTCCACCAATAG

Coding sequence (CDS)

ATGGAGCTCCGTAAGTTTGTTATTTCGGATCTTCCTTTAATGGCGAATCCCCGTCCTCCACGTGGTAGTGAGATTTTTTCCTCCACGAAAATTGGCCCCTTATCTGCCAGGTTTGATCTCGACCTAGCAGAGAAGTTTTCATTTGGAGAATCGATCCACGTGGGGACTTCTAATGCCGTTATGGTGATTATTACCGTTGGGGAGTCTCCAAAATGGAACTGTCATTCGGCGCGCACTCGAGGTACTATAAATACTCCCAAAGTTTCATTTCCGCTTTTTACGTTTCCTGAAATCTTGGAGTCCGACCTGAGCAGTTCAGAACTTACTCTAGATCGGTGTCGGAGCCCTTCGCAGGAGAAGGCCGACTCTGTCGAGGAATTATTTAGCAGGTTAGATTCTGAGTTAGAGGAGGAGATAGATAATTTTAGGTTTCCCGAGGAGGATGGAGACGATAATGACACCTTCACCTCGGGCCAGGGTTTAGAATTCCCCTCTTATATGCCTGAAAGTTATATAGTTGCTCTTCTGCCTGTTCCTCAGCTTTCTCAGTCCACTTTCGAAATTCTGAAAGTTTACAAGGATAAGTTCAAGAGCGGTGGGAAAATCAGCAACTTATTGACCGACAAGCTTCTTTTAGCTTCTGGTCTACTCGACTACAACCCACTACTCGTTCCTCTTGAGGCCCACAGGCCCAATTCAGAGCTCGGCGTGAAACGAAAGCGCCCCAGTCAAGGGGTTGCTTTTACCTCCAAGAAAGCGCCTACCCCTGTAGCTATTGACCTTCCTGTCGAGGTCGAGGTGGTGGAGGTCCACCAATAG

Protein sequence

MELRKFVISDLPLMANPRPPRGSEIFSSTKIGPLSARFDLDLAEKFSFGESIHVGTSNAVMVIITVGESPKWNCHSARTRGTINTPKVSFPLFTFPEILESDLSSSELTLDRCRSPSQEKADSVEELFSRLDSELEEEIDNFRFPEEDGDDNDTFTSGQGLEFPSYMPESYIVALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRPNSELGVKRKRPSQGVAFTSKKAPTPVAIDLPVEVEVVEVHQ
Homology
[Close]
BLAST of Moc07g00090 vs. NCBI nr
Match: XP_022142326.1 (uncharacterized protein LOC111012467 [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-15
Identity = 61/147 (41.50%), Postives = 82/147 (55.78%), Query Frame = 0 

Query: 124 VEELFSRLDSELEEEIDNFRFPEEDGDDNDTFTSGQGLEFPSYMPESYI-----VALLPV 183
           VE L + ++S+ + EI  FRF         T TS        +  E+ I     +++ P+
Sbjct: 174 VETLKAEVESQADREILEFRF---------TTTSSSAKPLDVFAKEASILTNDALSIKPI 233

Query: 184 PQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRPNSEL--- 243
           P+L+Q+TF+ LK YKD F  G KI  L+TDKLLL SGLLDYNPL+ P+EA RPNSEL   
Sbjct: 234 PELAQATFDTLKFYKDNFPRGRKIGTLVTDKLLLESGLLDYNPLVRPIEASRPNSELAMV 293

Query: 244 -----GVKRKRPSQGVAFTSKKAPTPV 258
                 VKRK   +  A    ++  PV
Sbjct: 294 CGFTSSVKRKSKGRAHALKIVQSSDPV 311

[Close]
BLAST of Moc07g00090 vs. NCBI nr
Match: XP_022152115.1 (uncharacterized protein LOC111019905 [Momordica charantia])

HSP 1 Score: 88.6 bits (218), Expect = 9.1e-14
Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0 

Query: 172 IVALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRP 231
           +V++ P+P+L Q+TF+ LK YK+ F  G KI  L+TDKLLL SGLLDYNPL+ P+EA RP
Sbjct: 51  LVSIKPIPELDQATFDTLKFYKENFPKGRKIGTLVTDKLLLESGLLDYNPLVRPIEASRP 110

Query: 232 NSELGV------KRKRPSQGVAFTSK 252
           NSEL +        KR S+G A   K
Sbjct: 111 NSELAMVCGFTGSVKRKSKGRAHALK 136

[Close]
BLAST of Moc07g00090 vs. NCBI nr
Match: XP_022138041.1 (uncharacterized protein LOC111009298 [Momordica charantia])

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-13
Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 0 

Query: 173 VALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRPN 232
           VA+ PVP+L+Q++F+ LK YK+ F  G K+  L+TDKLLL SGLLDYNP + P+E+ RPN
Sbjct: 38  VAIRPVPELTQASFDTLKYYKEHFPRGRKVGTLVTDKLLLESGLLDYNPAVRPIESSRPN 97

Query: 233 SEL--------GVKRKRPSQGVAFTSKKAPTPV 258
           SEL         VKRK   Q  A  + ++  PV
Sbjct: 98  SELAMVCGFASNVKRKSKGQAHALEAAQSSKPV 130

[Close]
BLAST of Moc07g00090 vs. NCBI nr
Match: XP_022139697.1 (uncharacterized protein LOC111010544 [Momordica charantia])

HSP 1 Score: 86.7 bits (213), Expect = 3.5e-13
Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 0 

Query: 173 VALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRPN 232
           +++ P+P+L+Q+TF+ LK YKD F  G KI  L+TDKLL  SGLLDYNPL+ P+EA RPN
Sbjct: 31  LSIKPIPELAQATFDTLKYYKDHFPKGRKIGTLVTDKLLWESGLLDYNPLVRPIEASRPN 90

Query: 233 SEL--------GVKRKRPSQGVAFTSKKAPTPVAIDLP 263
           SEL         VKRK   +  A  +     PV   +P
Sbjct: 91  SELAMVCGFTGSVKRKSKGRAHALKTVVGTEPVMPTVP 128

[Close]
BLAST of Moc07g00090 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 85.9 bits (211), Expect = 5.9e-13
Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 0 

Query: 172 IVALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRP 231
           +V++ PVP+L+Q++F+ LK YK++F  G K+  L+TD+LLL SGLLDYNP + P+E+ RP
Sbjct: 222 LVSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVRPIESSRP 281

Query: 232 NSEL--------GVKRKRPSQGVAF---TSKKAPTPVAI 260
           NSEL        GVKRK   +  A     S K  TP  +
Sbjct: 282 NSELAMVCGFASGVKRKSKGRAHALEAAQSSKPATPAVV 320

[Close]
BLAST of Moc07g00090 vs. ExPASy TrEMBL
Match: A0A6J1CLV1 (uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012467 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.2e-16
Identity = 61/147 (41.50%), Postives = 82/147 (55.78%), Query Frame = 0 

Query: 124 VEELFSRLDSELEEEIDNFRFPEEDGDDNDTFTSGQGLEFPSYMPESYI-----VALLPV 183
           VE L + ++S+ + EI  FRF         T TS        +  E+ I     +++ P+
Sbjct: 174 VETLKAEVESQADREILEFRF---------TTTSSSAKPLDVFAKEASILTNDALSIKPI 233

Query: 184 PQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRPNSEL--- 243
           P+L+Q+TF+ LK YKD F  G KI  L+TDKLLL SGLLDYNPL+ P+EA RPNSEL   
Sbjct: 234 PELAQATFDTLKFYKDNFPRGRKIGTLVTDKLLLESGLLDYNPLVRPIEASRPNSELAMV 293

Query: 244 -----GVKRKRPSQGVAFTSKKAPTPV 258
                 VKRK   +  A    ++  PV
Sbjct: 294 CGFTSSVKRKSKGRAHALKIVQSSDPV 311

[Close]
BLAST of Moc07g00090 vs. ExPASy TrEMBL
Match: A0A6J1DD09 (uncharacterized protein LOC111019905 OS=Momordica charantia OX=3673 GN=LOC111019905 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-14
Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0 

Query: 172 IVALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRP 231
           +V++ P+P+L Q+TF+ LK YK+ F  G KI  L+TDKLLL SGLLDYNPL+ P+EA RP
Sbjct: 51  LVSIKPIPELDQATFDTLKFYKENFPKGRKIGTLVTDKLLLESGLLDYNPLVRPIEASRP 110

Query: 232 NSELGV------KRKRPSQGVAFTSK 252
           NSEL +        KR S+G A   K
Sbjct: 111 NSELAMVCGFTGSVKRKSKGRAHALK 136

[Close]
BLAST of Moc07g00090 vs. ExPASy TrEMBL
Match: A0A6J1C8K9 (uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009298 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.8e-14
Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 0 

Query: 173 VALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRPN 232
           VA+ PVP+L+Q++F+ LK YK+ F  G K+  L+TDKLLL SGLLDYNP + P+E+ RPN
Sbjct: 38  VAIRPVPELTQASFDTLKYYKEHFPRGRKVGTLVTDKLLLESGLLDYNPAVRPIESSRPN 97

Query: 233 SEL--------GVKRKRPSQGVAFTSKKAPTPV 258
           SEL         VKRK   Q  A  + ++  PV
Sbjct: 98  SELAMVCGFASNVKRKSKGQAHALEAAQSSKPV 130

[Close]
BLAST of Moc07g00090 vs. ExPASy TrEMBL
Match: A0A6J1CEP5 (uncharacterized protein LOC111010544 OS=Momordica charantia OX=3673 GN=LOC111010544 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-13
Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 0 

Query: 173 VALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRPN 232
           +++ P+P+L+Q+TF+ LK YKD F  G KI  L+TDKLL  SGLLDYNPL+ P+EA RPN
Sbjct: 31  LSIKPIPELAQATFDTLKYYKDHFPKGRKIGTLVTDKLLWESGLLDYNPLVRPIEASRPN 90

Query: 233 SEL--------GVKRKRPSQGVAFTSKKAPTPVAIDLP 263
           SEL         VKRK   +  A  +     PV   +P
Sbjct: 91  SELAMVCGFTGSVKRKSKGRAHALKTVVGTEPVMPTVP 128

[Close]
BLAST of Moc07g00090 vs. ExPASy TrEMBL
Match: A0A6J1CR42 (uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013826 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.9e-13
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 172 IVALLPVPQLSQSTFEILKVYKDKFKSGGKISNLLTDKLLLASGLLDYNPLLVPLEAHRP 231
           +V++ PVP+L+Q++F+ LK YK++F  G K+  L+TD+LLL SGLLDYNP + P+E  RP
Sbjct: 129 LVSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVRPIEXSRP 188

Query: 232 NSEL--------GVKRKRPSQGVAF---TSKKAPTPVAI 260
           NS L        GVKRK   +  A     S K PTP  +
Sbjct: 189 NSXLAMVCRFASGVKRKSKGRAHALEAAQSSKPPTPAVV 227

The following BLAST results are available for this feature:
BLAST of Moc07g00090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022142326.11.3e-1541.50uncharacterized protein LOC111012467 [Momordica charantia][more]
XP_022152115.19.1e-1453.49uncharacterized protein LOC111019905 [Momordica charantia][more]
XP_022138041.12.0e-1349.46uncharacterized protein LOC111009298 [Momordica charantia][more]
XP_022139697.13.5e-1347.96uncharacterized protein LOC111010544 [Momordica charantia][more]
XP_022159063.15.9e-1346.46uncharacterized protein LOC111025502, partial [Momordica charantia][more]
BLAST of Moc07g00090 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc07g00090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CLV16.2e-1641.50uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1DD094.4e-1453.49uncharacterized protein LOC111019905 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1C8K99.8e-1449.46uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6J1CEP51.7e-1347.96uncharacterized protein LOC111010544 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1CR422.9e-1346.46uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
BLAST of Moc07g00090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc07g00090.1Moc07g00090.1mRNA