Moc06g42700 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g42700
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Locationchr6: 33442409 .. 33443843 (+)
RNA-Seq ExpressionMoc06g42700
SyntenyMoc06g42700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCATAACGAATGACGATGACCTCCGATTTGCATTACTCCAAGAACAGGTTTCTAAAGTCTCACTATTTGTATCAACCATCCTTCGTGAAATCATTGACCTATGATCATCTAAAATAAACCAAGATGAAGAGCAGTCCATTCATAGTGCATAATTTGTTCCAAAAGAAGGTTACACGAGAGTAGAAGAGTGAGGGTTGAATGAAATATACATGCAAGGCATGTACAGTGCAGACTGCTTATACACTCAAGACTCGGACTTGGTCAGCCCTGCACCATGCAGGTCGCCTGTAGTGCAACTCCCATCAGATAAAATAAATAATATAGATCAAAGTATGTAGATGAACACACTTGCACAGTTGACACCTTGAATCACGGATAGGCAAGCAGTTGGGTCGTAACAAAACTTATAAAGGATAGGCTTGCTGGAACCAGTTGTATTTACAAGATAAAACATATTAAAGAGGATGTCCGTAAAAAGTTCGGGGTGAAGATAAGTTATGACAAGGCCTATCGAGCATGAGAGTTAGCATACGCTATTGTTAGGAGCCGACCAAAGGACTCATACATGTATCTCCATGCGTACGGTGAGGCGTTAAAAATATAGAATCCAGGTACGGTTTTCCACATCGAGACTGAAGGTTCCCTTAACTTCAAATACATGTTCATGGTTGTGGGTGCCAACATTATAGGGTTTCAGACACTCACAAAGTGTAATTATGGTTAATGGCACACATTTGAGGGGGAAGTTCAAAGGAGTGCTGCTAATATGTGTCGCAATGGACGGGAGTAATCAAATATACTTACTTGCATTCGCTATTGTAAACAACGAAAGTGATGCATCGTGGAAGTGGTTTATGAAAAACTTAAAGGACACAATTGGAGCCTCACCAGCTCTTGTATTCATATCTGATTACCATGTCAGTATTACAAATACAACAAGTGAGATATTCCCGGAAGCATTCCATGCTATATGCACATACCACCTTGGGAACAACATAAAGGCTCGATTCAAGAATACTGCATTTTTCAAATTGTATCAAGACGTAGCGTACTACTGAGCCACAATTCACGTACTACTGGAACCAGATACTACCGATTGGAAGTGGTTCACTGGCCGAATACTTACAAGAAATTGGGATAGAACAGTGGGCACGGTGCTATCAAGTTTGTAGAAGGTATAAAAACATGACGACGAACAGCACTGAGCCAGTGAATGCCCTTCTTCGAAAGGCTAGAGAGTTACCGGTCACTAAGATTGTCGAGTTCATCCGCGACTGGCTCCAAAGATGGTTCCACAAAAGAAGAACTTACTGGTCCACCCGAAACACCTCTCATTCAGACTATGCAGATGAGCGACTTGCACTACGGTTTGAGAAGTCCTGTCGCTACATAGTCAAATCAATCGATTGGTGCATGCATGCTTCATGTTGA

mRNA sequence

ATGTTCATAACGAATGACGATGACCTCCGATTTGCATTACTCCAAGAACAGATACTACCGATTGGAAGTGGTTCACTGGCCGAATACTTACAAGAAATTGGGATAGAACAGTGGGCACGGTGCTATCAAGTTTGTAGAAGGTATAAAAACATGACGACGAACAGCACTGAGCCAGTGAATGCCCTTCTTCGAAAGGCTAGAGAGTTACCGGTCACTAAGATTGTCGAGTTCATCCGCGACTGGCTCCAAAGATGGTTCCACAAAAGAAGAACTTACTGGTCCACCCGAAACACCTCTCATTCAGACTATGCAGATGAGCGACTTGCACTACGGTTTGAGAAGTCCTGTCGCTACATAGTCAAATCAATCGATTGGTGCATGCATGCTTCATGTTGA

Coding sequence (CDS)

ATGTTCATAACGAATGACGATGACCTCCGATTTGCATTACTCCAAGAACAGATACTACCGATTGGAAGTGGTTCACTGGCCGAATACTTACAAGAAATTGGGATAGAACAGTGGGCACGGTGCTATCAAGTTTGTAGAAGGTATAAAAACATGACGACGAACAGCACTGAGCCAGTGAATGCCCTTCTTCGAAAGGCTAGAGAGTTACCGGTCACTAAGATTGTCGAGTTCATCCGCGACTGGCTCCAAAGATGGTTCCACAAAAGAAGAACTTACTGGTCCACCCGAAACACCTCTCATTCAGACTATGCAGATGAGCGACTTGCACTACGGTTTGAGAAGTCCTGTCGCTACATAGTCAAATCAATCGATTGGTGCATGCATGCTTCATGTTGA

Protein sequence

MFITNDDDLRFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKARELPVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCMHASC
Homology
[Close]
BLAST of Moc06g42700 vs. NCBI nr
Match: XP_022145824.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46
Identity = 91/118 (77.12%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL +GSG+LA+YLQEIG+E+WARCYQV RRY+NMTTNS E VNALLRKAREL
Sbjct: 136 QFTYYWNQILSVGSGTLAKYLQEIGVERWARCYQVGRRYENMTTNSAESVNALLRKAREL 195

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFIRD LQRWFH+RRT+WST+NTSHSDYA+ERLAL+FEKS RY VK +DWCM
Sbjct: 196 PITKIVEFIRDLLQRWFHERRTHWSTQNTSHSDYAEERLALQFEKSRRYTVKPVDWCM 253

[Close]
BLAST of Moc06g42700 vs. NCBI nr
Match: XP_022156308.1 (uncharacterized protein LOC111023235 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 5.7e-46
Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL +GSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS E VNALLR+AREL
Sbjct: 118 QFTYYWNQILSVGSGSLAKYLQEIGIERWARCYQVGRRYENMTTNSAESVNALLREAREL 177

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFI D LQRWFH+RRT+WST+NTSHSDYA+ERLAL+FEKS RY VK +DWCM
Sbjct: 178 PITKIVEFIHDLLQRWFHERRTHWSTQNTSHSDYAEERLALQFEKSRRYTVKPVDWCM 235

[Close]
BLAST of Moc06g42700 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia])

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44
Identity = 89/118 (75.42%), Postives = 103/118 (87.29%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+N TTNS E VNALLR+AREL
Sbjct: 474 QFTYYWNQILSIGSGSLAKYLQEIGIERWARCYQVGRRYENTTTNSAESVNALLREAREL 533

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFIR+ LQRWFH+RR +WST+NTSHSDYA+ERLA++FEKS RY VK +DWCM
Sbjct: 534 PITKIVEFIRELLQRWFHERRIHWSTQNTSHSDYAEERLAVQFEKSRRYTVKPVDWCM 591

[Close]
BLAST of Moc06g42700 vs. NCBI nr
Match: XP_022159086.1 (uncharacterized protein LOC111025530 [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 3.1e-44
Identity = 88/118 (74.58%), Postives = 102/118 (86.44%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL +GSGSLA+YLQEIG+E+WARCYQV RRY+NMTTNS E VN LLR+A EL
Sbjct: 259 QFTYYWNQILSVGSGSLAKYLQEIGVERWARCYQVGRRYENMTTNSAESVNVLLREAIEL 318

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFIRD LQRWFH RRT+WST+NTSHSDYA+E+LAL+FEKS RY VK +DWCM
Sbjct: 319 PITKIVEFIRDLLQRWFHVRRTHWSTQNTSHSDYAEEQLALQFEKSRRYTVKPVDWCM 376

[Close]
BLAST of Moc06g42700 vs. NCBI nr
Match: XP_022151685.1 (uncharacterized protein LOC111019601 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 4.5e-43
Identity = 88/118 (74.58%), Postives = 101/118 (85.59%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS   VNA L++AREL
Sbjct: 118 QFTYYWNQILSIGSGSLAKYLQEIGIERWARCYQVGRRYENMTTNSAASVNAFLQEAREL 177

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFI + LQRWFH+RRT WST+NTSHSDYA+ERLA++FEKS RY VK IDWCM
Sbjct: 178 PITKIVEFICELLQRWFHERRTQWSTQNTSHSDYAEERLAVQFEKSRRYTVKPIDWCM 235

[Close]
BLAST of Moc06g42700 vs. ExPASy TrEMBL
Match: A0A6J1CWE6 (protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC111015184 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.2e-47
Identity = 91/118 (77.12%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL +GSG+LA+YLQEIG+E+WARCYQV RRY+NMTTNS E VNALLRKAREL
Sbjct: 136 QFTYYWNQILSVGSGTLAKYLQEIGVERWARCYQVGRRYENMTTNSAESVNALLRKAREL 195

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFIRD LQRWFH+RRT+WST+NTSHSDYA+ERLAL+FEKS RY VK +DWCM
Sbjct: 196 PITKIVEFIRDLLQRWFHERRTHWSTQNTSHSDYAEERLALQFEKSRRYTVKPVDWCM 253

[Close]
BLAST of Moc06g42700 vs. ExPASy TrEMBL
Match: A0A6J1DQ99 (uncharacterized protein LOC111023235 OS=Momordica charantia OX=3673 GN=LOC111023235 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46
Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL +GSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS E VNALLR+AREL
Sbjct: 118 QFTYYWNQILSVGSGSLAKYLQEIGIERWARCYQVGRRYENMTTNSAESVNALLREAREL 177

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFI D LQRWFH+RRT+WST+NTSHSDYA+ERLAL+FEKS RY VK +DWCM
Sbjct: 178 PITKIVEFIHDLLQRWFHERRTHWSTQNTSHSDYAEERLALQFEKSRRYTVKPVDWCM 235

[Close]
BLAST of Moc06g42700 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.9e-45
Identity = 89/118 (75.42%), Postives = 103/118 (87.29%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+N TTNS E VNALLR+AREL
Sbjct: 474 QFTYYWNQILSIGSGSLAKYLQEIGIERWARCYQVGRRYENTTTNSAESVNALLREAREL 533

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFIR+ LQRWFH+RR +WST+NTSHSDYA+ERLA++FEKS RY VK +DWCM
Sbjct: 534 PITKIVEFIRELLQRWFHERRIHWSTQNTSHSDYAEERLAVQFEKSRRYTVKPVDWCM 591

[Close]
BLAST of Moc06g42700 vs. ExPASy TrEMBL
Match: A0A6J1E2V3 (uncharacterized protein LOC111025530 OS=Momordica charantia OX=3673 GN=LOC111025530 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 88/118 (74.58%), Postives = 102/118 (86.44%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL +GSGSLA+YLQEIG+E+WARCYQV RRY+NMTTNS E VN LLR+A EL
Sbjct: 259 QFTYYWNQILSVGSGSLAKYLQEIGVERWARCYQVGRRYENMTTNSAESVNVLLREAIEL 318

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFIRD LQRWFH RRT+WST+NTSHSDYA+E+LAL+FEKS RY VK +DWCM
Sbjct: 319 PITKIVEFIRDLLQRWFHVRRTHWSTQNTSHSDYAEEQLALQFEKSRRYTVKPVDWCM 376

[Close]
BLAST of Moc06g42700 vs. ExPASy TrEMBL
Match: A0A6J1DBW0 (uncharacterized protein LOC111019601 OS=Momordica charantia OX=3673 GN=LOC111019601 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.2e-43
Identity = 88/118 (74.58%), Postives = 101/118 (85.59%), Query Frame = 0 

Query: 10  RFALLQEQILPIGSGSLAEYLQEIGIEQWARCYQVCRRYKNMTTNSTEPVNALLRKAREL 69
           +F     QIL IGSGSLA+YLQEIGIE+WARCYQV RRY+NMTTNS   VNA L++AREL
Sbjct: 118 QFTYYWNQILSIGSGSLAKYLQEIGIERWARCYQVGRRYENMTTNSAASVNAFLQEAREL 177

Query: 70  PVTKIVEFIRDWLQRWFHKRRTYWSTRNTSHSDYADERLALRFEKSCRYIVKSIDWCM 128
           P+TKIVEFI + LQRWFH+RRT WST+NTSHSDYA+ERLA++FEKS RY VK IDWCM
Sbjct: 178 PITKIVEFICELLQRWFHERRTQWSTQNTSHSDYAEERLAVQFEKSRRYTVKPIDWCM 235

The following BLAST results are available for this feature:
BLAST of Moc06g42700 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145824.11.5e-4677.12protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia][more]
XP_022156308.15.7e-4677.12uncharacterized protein LOC111023235 [Momordica charantia][more]
XP_022154925.11.8e-4475.42uncharacterized protein LOC111022071 [Momordica charantia][more]
XP_022159086.13.1e-4474.58uncharacterized protein LOC111025530 [Momordica charantia][more]
XP_022151685.14.5e-4374.58uncharacterized protein LOC111019601 [Momordica charantia][more]
BLAST of Moc06g42700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g42700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CWE67.2e-4777.12protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1DQ992.8e-4677.12uncharacterized protein LOC111023235 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DL088.9e-4575.42uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1E2V31.5e-4474.58uncharacterized protein LOC111025530 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DBW02.2e-4374.58uncharacterized protein LOC111019601 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
BLAST of Moc06g42700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g42700.1Moc06g42700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding