Moc06g42060 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g42060
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr6: 33005131 .. 33006687 (+)
RNA-Seq Expression	Moc06g42060
Synteny	Moc06g42060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAGCAATTCGACGGGACGACCGACCCAGTGGATCATCTAGATGCTTATCGGGAATGGATGGATATCTATGGAGTGTCGGAAGCGGTCAGGTGTCGGGTATTCTCGACTACTCTCAACGGGTCGGCCAGAATATGGTTCCGACAATTAAAACGAGGGTCGATCTCGAGTTTCAAGAGCTTGGCTAGAGCATTCGTGGCTCAGTTTGTAGGGGGGCGGTGTCGGAGCCGACCCGTGGCTTATCTCTTAACCATTAAGCAGAGGACGACAGAGAGTCTACGCGACTATGTAGCCTGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAACATTTGTCATTCTCGTTCGGAAAGAGAACACCGAACACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGGTGAGTTCTTTTACTAAAAAAGGGAACCTGACGGAAAGCGAACCGACCCAAAGAGGGAGAGGTCGGGAGATAAACCGCAGGGGTCGAGATGGGAGAAGAGGGATCGGAGTAGCCAGAAAGATCCACCCCGAAAATTTGAAAAGTATACCCCGACCACCGTTCCAATCGAGCAAGTGCTGATGGAGATCAAAGACCAAAGGTTGCTTAAATGGCCGGAGAGGATGAAGGCCCCGTCAGCTAAGCGCAGCAAAGGCAGGTATTGTCTTTTCCACAGGGATCACGGCCATGCAACTCAGGATTGTTTTGATCTCAAGGAAGAGGTGGAAGGACTAATCCGAAGGGGCTACCTCAAGGAGTATGTAGAGGAACCTAAAGTGACCCAGAACGACGAAAGCGACAAGTCTCCCGCAAGAGAGATTCGAACTATAATGGGGGGCCCCATAGAAAGAGAATCCGGGAGAAAAAGGAAAGCAGATGTAGGTGAAGCTAGGACGAGTCGCGAGCAAAATGAGGTCTACCACGCGTATACTACAAACCGGCCGGTGACAATTGAATTTTCGGAGGACGAAGCAACTCACCTCCTTCACCCTCATAACGATGCACTTGTTATCACGTTGAAGATAGCAAATGTTAAAGTACATCGAGTCTTGGTGGATGGGGACAGCTCGGCGGATATCATCTCCTGGACAGCCTATAAAGCTATGGATCTAGGAGAAAAGGTGCTCAAGAGTAGTCCAGCACCACTGGTAGGATTTGGGGGAGAACGGGTCATCCCCGAAGGGAGGATTGAGTTGCCAGTAACATTCGGAAGTGGGCCGAAGAGTGTCACCAAGATGGTGGACTTTTTGGTCGTTAACTACACATCCTCCTACAACGCAATACTGGGAAGACCGACGATGCATATGCTCAGAGCGATACCATCCACATATCACCAATCCATGAAGTTCCCAACACCGGGTGGGGTAGGAGAAATTAAAGGAGAACAACGAGTGTCACGGGAATGCTACTATACCTCAATGAGGGACAACGACAGAACTTCTACTAAGGGGGGCTGTTGA

mRNA sequence

ATGAGAGAAAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAGCAATTCGACGGGACGACCGACCCAGTGGATCATCTAGATGCTTATCGGGAATGGATGGATATCTATGGAGTGTCGGAAGCGGTCAGGTGTCGGGTATTCTCGACTACTCTCAACGGGTCGGCCAGAATATGGTTCCGACAATTAAAACGAGGGTCGATCTCGAGTTTCAAGAGCTTGGCTAGAGCATTCGTGGCTCAGTTTGTAGGGGGGCGGTGTCGGAGCCGACCCGTGGCTTATCTCTTAACCATTAAGCAGAGGACGACAGAGAGTCTACGCGACTATGTAGCCTGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAACATTTGGAACCTGACGGAAAGCGAACCGACCCAAAGAGGGAGAGGTCGGGAGATAAACCGCAGGGGTCGAGATGGGAGAAGAGGGATCGGAGTAGCCAGAAAGATCCACCCCGAAAATTTGAAAAGTATACCCCGACCACCGTTCCAATCGAGCAAGTGCTGATGGAGATCAAAGACCAAAGGTTGCTTAAATGGCCGGAGAGGATGAAGGCCCCGTCAGCTAAGCGCAGCAAAGGCAGGTATTGTCTTTTCCACAGGGATCACGGCCATGCAACTCAGGATTGTTTTGATCTCAAGGAAGAGGTGGAAGGACTAATCCGAAGGGGCTACCTCAAGGAGTATGTAGAGGAACCTAAAGTGACCCAGAACGACGAAAGCGACAAGTCTCCCGCAAGAGAGATTCGAACTATAATGGGGGGCCCCATAGAAAGAGAATCCGGGAGAAAAAGGAAAGCAGATGTAGGTGAAGCTAGGACGAGTCGCGAGCAAAATGAGGTCTACCACGCGTATACTACAAACCGGCCGGTGACAATTGAATTTTCGGAGGACGAAGCAACTCACCTCCTTCACCCTCATAACGATGCACTTGTTATCACGTTGAAGATAGCAAATGTTAAAGTACATCGAGTCTTGGTGGATGGGGACAGCTCGGCGGATATCATCTCCTGGACAGCCTATAAAGCTATGGATCTAGGAGAAAAGGTGCTCAAGAGTAGTCCAGCACCACTGGTAGGATTTGGGGGAGAACGGGTCATCCCCGAAGGGAGGATTGAGTTGCCAGTAACATTCGGAAGTGGGCCGAAGAGTGTCACCAAGATGGTGGACTTTTTGGTCGTTAACTACACATCCTCCTACAACGCAATACTGGGAAGACCGACGATGCATATGCTCAGAGCGATACCATCCACATATCACCAATCCATGAAGTTCCCAACACCGGGTGGGGTAGGAGAAATTAAAGGAGAACAACGAGTGTCACGGGAATGCTACTATACCTCAATGAGGGACAACGACAGAACTTCTACTAAGGGGGGCTGTTGA

Coding sequence (CDS)

ATGAGAGAAAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAGCAATTCGACGGGACGACCGACCCAGTGGATCATCTAGATGCTTATCGGGAATGGATGGATATCTATGGAGTGTCGGAAGCGGTCAGGTGTCGGGTATTCTCGACTACTCTCAACGGGTCGGCCAGAATATGGTTCCGACAATTAAAACGAGGGTCGATCTCGAGTTTCAAGAGCTTGGCTAGAGCATTCGTGGCTCAGTTTGTAGGGGGGCGGTGTCGGAGCCGACCCGTGGCTTATCTCTTAACCATTAAGCAGAGGACGACAGAGAGTCTACGCGACTATGTAGCCTGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAACATTTGGAACCTGACGGAAAGCGAACCGACCCAAAGAGGGAGAGGTCGGGAGATAAACCGCAGGGGTCGAGATGGGAGAAGAGGGATCGGAGTAGCCAGAAAGATCCACCCCGAAAATTTGAAAAGTATACCCCGACCACCGTTCCAATCGAGCAAGTGCTGATGGAGATCAAAGACCAAAGGTTGCTTAAATGGCCGGAGAGGATGAAGGCCCCGTCAGCTAAGCGCAGCAAAGGCAGGTATTGTCTTTTCCACAGGGATCACGGCCATGCAACTCAGGATTGTTTTGATCTCAAGGAAGAGGTGGAAGGACTAATCCGAAGGGGCTACCTCAAGGAGTATGTAGAGGAACCTAAAGTGACCCAGAACGACGAAAGCGACAAGTCTCCCGCAAGAGAGATTCGAACTATAATGGGGGGCCCCATAGAAAGAGAATCCGGGAGAAAAAGGAAAGCAGATGTAGGTGAAGCTAGGACGAGTCGCGAGCAAAATGAGGTCTACCACGCGTATACTACAAACCGGCCGGTGACAATTGAATTTTCGGAGGACGAAGCAACTCACCTCCTTCACCCTCATAACGATGCACTTGTTATCACGTTGAAGATAGCAAATGTTAAAGTACATCGAGTCTTGGTGGATGGGGACAGCTCGGCGGATATCATCTCCTGGACAGCCTATAAAGCTATGGATCTAGGAGAAAAGGTGCTCAAGAGTAGTCCAGCACCACTGGTAGGATTTGGGGGAGAACGGGTCATCCCCGAAGGGAGGATTGAGTTGCCAGTAACATTCGGAAGTGGGCCGAAGAGTGTCACCAAGATGGTGGACTTTTTGGTCGTTAACTACACATCCTCCTACAACGCAATACTGGGAAGACCGACGATGCATATGCTCAGAGCGATACCATCCACATATCACCAATCCATGAAGTTCCCAACACCGGGTGGGGTAGGAGAAATTAAAGGAGAACAACGAGTGTCACGGGAATGCTACTATACCTCAATGAGGGACAACGACAGAACTTCTACTAAGGGGGGCTGTTGA

Protein sequence

MREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVAQFVGGRCRSRPVAYLLTIKQRTTESLRDYVAWFNEEKLQVEGLTDAVSLLAFMSGVRDEHLEPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKVTQNDESDKSPAREIRTIMGGPIERESGRKRKADVGEARTSREQNEVYHAYTTNRPVTIEFSEDEATHLLHPHNDALVITLKIANVKVHRVLVDGDSSADIISWTAYKAMDLGEKVLKSSPAPLVGFGGERVIPEGRIELPVTFGSGPKSVTKMVDFLVVNYTSSYNAILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGGC

Homology

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BLAST of Moc06g42060 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 758.8 bits (1958), Expect = 2.8e-215
Identity = 392/447 (87.70%), Postives = 395/447 (88.37%), Query Frame = 0


Query: 1   MREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 60
           MREKVPPKFKLPTVKQFD TTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF
Sbjct: 185 MREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 244

Query: 61  RQLKRGSISSFKSLARAFVAQFVGGRCRSRPVAYLLTIKQRTTESLRDYVAWFNEEKLQV 120
           RQLKRGSISSFKSLARAFV QFVGGRCRSRPVAYLLTIKQRTTESLRDYVA FNEEKLQV
Sbjct: 245 RQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQV 304

Query: 121 EGLTDAVSLLAFMSGVRDEHL---------------------------------EPDGKR 180
           EGLTDAVSLLAFMSGVRDEHL                                 EPDGKR
Sbjct: 305 EGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKR 364

Query: 181 TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPER 240
           TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPER
Sbjct: 365 TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPER 424

Query: 241 MKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKVTQNDESDK 300
           MKA SAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPK TQN ESDK
Sbjct: 425 MKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQNGESDK 484

Query: 301 SPAREIRTIMGGPIERESGRKRKADVGEARTSREQNEVYHAYTTNRPVTIEFSEDEATHL 360
           SPAREIRTIMGGPIERESGRKRKADV EARTSREQNEVYHAYTTNRPVTIEFSEDEATHL
Sbjct: 485 SPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVTIEFSEDEATHL 544

Query: 361 LHPHNDALVITLKIANVKVHRVLVDGDSSADIISWTAYKAMDLGEKVLKSSPAPLVGFGG 415
           LHPHNDALVI LKIANVKVHRVLVDG SSADI+SWTAYKAMDL EKVLK SPAPLVGFG 
Sbjct: 545 LHPHNDALVIXLKIANVKVHRVLVDGGSSADIJSWTAYKAMDLXEKVLKXSPAPLVGFGX 604

[Close]

BLAST of Moc06g42060 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 523.9 bits (1348), Expect = 1.5e-144
Identity = 275/332 (82.83%), Postives = 282/332 (84.94%), Query Frame = 0


Query: 63  LKRGSISSFKSLARAFVAQFVGGRCRSRPVAYLLTIKQRTTESLRDYVAWFNEEKLQVEG 122
           +KRGSISSFKSLARAFV QFVGGRCRSRPVAYLLTIKQRTTESL DYVA FN+EKLQ+E 
Sbjct: 31  IKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIES 90

Query: 123 LTDAVSLLAFMSGVRDEHL---------------------------------EPDGKRTD 182
           LTD VSLLAFMSGVRDEHL                                 EPDGKRTD
Sbjct: 91  LTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGKRTD 150

Query: 183 PKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMK 242
            KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVP+EQVLMEIKDQRLLKWPERMK
Sbjct: 151 QKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMK 210

Query: 243 APSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKVTQNDESDKSP 302
            PS KRSKGRYCLFHRDH HATQD FDLKEEVEGLIRRGYL+EYVEEPK TQN ES+KSP
Sbjct: 211 VPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQNGESEKSP 270

Query: 303 AREIRTIMGGPIERESGRKRKADVGEARTSREQNEVYHAYTTNRPVTIEFSEDEATHLLH 362
           AREIRTIMGGPIERES RKRKADV EAR SREQNEVYHAYTTNR VTIEFSEDEATHLLH
Sbjct: 271 AREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRSVTIEFSEDEATHLLH 330

[Close]

BLAST of Moc06g42060 vs. NCBI nr
Match: XP_022156748.1 (uncharacterized protein LOC111023587 [Momordica charantia])

HSP 1 Score: 477.2 bits (1227), Expect = 1.6e-130
Identity = 244/304 (80.26%), Postives = 251/304 (82.57%), Query Frame = 0


Query: 182 YTPTTVPIEQVLMEIKDQRLLKWPERMKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEV 241
           YT TT+P+EQVLMEIKDQRLLKWPERMKAPS KRSKGRYCLFHRDH HATQDCFDLKEEV
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 242 EGLIRRGYLKEYVEEPKVTQNDESDKSPAREIRTIMGGPIERESGRKRKADVGEARTSRE 301
           EGLIRRGYLK                              E     K+KADV EAR +RE
Sbjct: 62  EGLIRRGYLK------------------------------EERIWEKKKADVREARANRE 121

Query: 302 QNEVYHAYTTNRPVTIEFSEDEATHLLHPHNDALVITLKIANVKVHRVLVDGDSSADIIS 361
           QNEVYHAY T+RPVTIEFSEDEAT L H HNDALVITLKIANVKVHR+LVDG SSADIIS
Sbjct: 122 QNEVYHAYITDRPVTIEFSEDEATQLFHSHNDALVITLKIANVKVHRILVDGGSSADIIS 181

Query: 362 WTAYKAMDLGEKVLKSSPAPLVGFGGERVIPEGRIELPVTFGSGPKSVTKMVDFLVVNYT 421
           WTAYKAMDL EKVLKSSPAPLVGFGGERVI EGRIELPVTFGSGPK VTKMVDFLVVNYT
Sbjct: 182 WTAYKAMDLEEKVLKSSPAPLVGFGGERVISEGRIELPVTFGSGPKGVTKMVDFLVVNYT 241

Query: 422 SSYNAILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTST 481
           SSYN ILGR TMHML+ IPSTYHQSMKFPTPGGV EIKGEQRVSRECYYTSMR NDRTST
Sbjct: 242 SSYNEILGRLTMHMLKVIPSTYHQSMKFPTPGGVXEIKGEQRVSRECYYTSMRGNDRTST 275

Query: 482 KGGC 486
           KGGC
Sbjct: 302 KGGC 275

[Close]

BLAST of Moc06g42060 vs. NCBI nr
Match: XP_022144467.1 (uncharacterized protein LOC111014147 [Momordica charantia])

HSP 1 Score: 475.3 bits (1222), Expect = 6.2e-130
Identity = 245/292 (83.90%), Postives = 246/292 (84.25%), Query Frame = 0


Query: 194 MEIKDQRLLKWPERMKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEY 253
           MEIKDQRLLKWPERMKAPSAKRSK RYCLFHR HGHATQDCFDLKEEVEGLIRRGYLKEY
Sbjct: 1   MEIKDQRLLKWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 254 VEEPKVTQNDESDKSPAREIRTIMGGPIERESGRKRKADVGEARTSREQNEVYHAYTTNR 313
           VEEPK TQN ESDKSPAREIRTIMGGPIERESGRKRKADV EART REQNE         
Sbjct: 61  VEEPKATQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQNE--------- 120

Query: 314 PVTIEFSEDEATHLLHPHNDALVITLKIANVKVHRVLVDGDSSADIISWTAYKAMDLGEK 373
                                      IANVKVHRVLVDG S ADI+SWTAYKAMDLGEK
Sbjct: 121 ---------------------------IANVKVHRVLVDGGSLADILSWTAYKAMDLGEK 180

Query: 374 VLKSSPAPLVGFGGERVIPEGRIELPVTFGSGPKSVTKMVDFLVVNYTSSYNAILGRPTM 433
           VLKSSPAPLVGFGGERVIPEGRIE PVTFGSGPKSVTKMVD LVVNYTSSYNAILGRPTM
Sbjct: 181 VLKSSPAPLVGFGGERVIPEGRIEXPVTFGSGPKSVTKMVDXLVVNYTSSYNAILGRPTM 240

Query: 434 HMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGGC 486
           HMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGGC
Sbjct: 241 HMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGGC 256

[Close]

BLAST of Moc06g42060 vs. NCBI nr
Match: XP_022150028.1 (uncharacterized protein LOC111018300 [Momordica charantia])

HSP 1 Score: 474.9 bits (1221), Expect = 8.1e-130
Identity = 234/299 (78.26%), Postives = 261/299 (87.29%), Query Frame = 0


Query: 187 VPIEQVLMEIKDQRLLKWPERMKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIR 246
           VP+EQVLMEIK QRLL+WPERM AP +KRSKGRYCLFHRDH HATQDCFDLK+EV+ LI+
Sbjct: 2   VPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQ 61

Query: 247 RGYLKEYVEEPKVTQNDESD-KSPAREIRTIMGGPIERESGRKRKADVGEARTSREQNEV 306
           RGYLKEYVE+PK TQN E+D KSPAREIRTIMGGP+ERE GRKRKA + E RTS+ Q+E+
Sbjct: 62  RGYLKEYVEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEI 121

Query: 307 YHAYTTNRPVTIEFSEDEATHLLHPHNDALVITLKIANVKVHRVLVDGDSSADIISWTAY 366
           YH +   +P  IEFSEDEATHLLHPHND LVITLKIAN KVHR+LVDG SSADIIS TAY
Sbjct: 122 YHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGGSSADIISLTAY 181

Query: 367 KAMDLGEKVLKSSPAPLVGFGGERVIPEGRIELPVTFGSGPKSVTKMVDFLVVNYTSSYN 426
           KAMDLGE+  KSSPA LV F GERVIPEGR EL VTFGSGPKS+T ++DFLV++Y SSYN
Sbjct: 182 KAMDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSITTIMDFLVIDYASSYN 241

Query: 427 AILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGG 485
           AILGRPT+HML+AIPSTYHQS+ FPT GG+GEIK EQRVSRECYYTSM+ NDR ST GG
Sbjct: 242 AILGRPTIHMLKAIPSTYHQSINFPTHGGIGEIKEEQRVSRECYYTSMKGNDRASTAGG 300

[Close]

BLAST of Moc06g42060 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 758.4 bits (1957), Expect = 1.8e-215
Identity = 392/447 (87.70%), Postives = 395/447 (88.37%), Query Frame = 0


Query: 1   MREKVPPKFKLPTVKQFDGTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 60
           MREKVPPKFKLPTVKQFD TTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF
Sbjct: 185 MREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 244

Query: 61  RQLKRGSISSFKSLARAFVAQFVGGRCRSRPVAYLLTIKQRTTESLRDYVAWFNEEKLQV 120
           RQLKRGSISSFKSLARAFV QFVGGRCRSRPVAYLLTIKQRTTESLRDYVA FNEEKLQV
Sbjct: 245 RQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQV 304

Query: 121 EGLTDAVSLLAFMSGVRDEHL---------------------------------EPDGKR 180
           EGLTDAVSLLAFMSGVRDEHL                                 EPDGKR
Sbjct: 305 EGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKR 364

Query: 181 TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPER 240
           TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPER
Sbjct: 365 TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPER 424

Query: 241 MKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKVTQNDESDK 300
           MKA SAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPK TQN ESDK
Sbjct: 425 MKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQNGESDK 484

Query: 301 SPAREIRTIMGGPIERESGRKRKADVGEARTSREQNEVYHAYTTNRPVTIEFSEDEATHL 360
           SPAREIRTIMGGPIERESGRKRKADV EARTSREQNEVYHAYTTNRPVTIEFSEDEATHL
Sbjct: 485 SPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVTIEFSEDEATHL 544

Query: 361 LHPHNDALVITLKIANVKVHRVLVDGDSSADIISWTAYKAMDLGEKVLKSSPAPLVGFGG 415
           LHPHNDALVI LKIANVKVHRVLVDG SSADI+SWTAYKAMDL EKVLK SPAPLVGFG 
Sbjct: 545 LHPHNDALVIXLKIANVKVHRVLVDGGSSADILSWTAYKAMDLXEKVLKXSPAPLVGFGX 604

[Close]

BLAST of Moc06g42060 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 7.3e-145
Identity = 275/332 (82.83%), Postives = 282/332 (84.94%), Query Frame = 0


Query: 63  LKRGSISSFKSLARAFVAQFVGGRCRSRPVAYLLTIKQRTTESLRDYVAWFNEEKLQVEG 122
           +KRGSISSFKSLARAFV QFVGGRCRSRPVAYLLTIKQRTTESL DYVA FN+EKLQ+E 
Sbjct: 31  IKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNKEKLQIES 90

Query: 123 LTDAVSLLAFMSGVRDEHL---------------------------------EPDGKRTD 182
           LTD VSLLAFMSGVRDEHL                                 EPDGKRTD
Sbjct: 91  LTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGKRTD 150

Query: 183 PKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMK 242
            KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVP+EQVLMEIKDQRLLKWPERMK
Sbjct: 151 QKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMK 210

Query: 243 APSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKVTQNDESDKSP 302
            PS KRSKGRYCLFHRDH HATQD FDLKEEVEGLIRRGYL+EYVEEPK TQN ES+KSP
Sbjct: 211 VPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQNGESEKSP 270

Query: 303 AREIRTIMGGPIERESGRKRKADVGEARTSREQNEVYHAYTTNRPVTIEFSEDEATHLLH 362
           AREIRTIMGGPIERES RKRKADV EAR SREQNEVYHAYTTNR VTIEFSEDEATHLLH
Sbjct: 271 AREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRSVTIEFSEDEATHLLH 330

[Close]

BLAST of Moc06g42060 vs. ExPASy TrEMBL
Match: A0A6J1DRG9 (uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023587 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 7.9e-131
Identity = 244/304 (80.26%), Postives = 251/304 (82.57%), Query Frame = 0


Query: 182 YTPTTVPIEQVLMEIKDQRLLKWPERMKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEV 241
           YT TT+P+EQVLMEIKDQRLLKWPERMKAPS KRSKGRYCLFHRDH HATQDCFDLKEEV
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 242 EGLIRRGYLKEYVEEPKVTQNDESDKSPAREIRTIMGGPIERESGRKRKADVGEARTSRE 301
           EGLIRRGYLK                              E     K+KADV EAR +RE
Sbjct: 62  EGLIRRGYLK------------------------------EERIWEKKKADVREARANRE 121

Query: 302 QNEVYHAYTTNRPVTIEFSEDEATHLLHPHNDALVITLKIANVKVHRVLVDGDSSADIIS 361
           QNEVYHAY T+RPVTIEFSEDEAT L H HNDALVITLKIANVKVHR+LVDG SSADIIS
Sbjct: 122 QNEVYHAYITDRPVTIEFSEDEATQLFHSHNDALVITLKIANVKVHRILVDGGSSADIIS 181

Query: 362 WTAYKAMDLGEKVLKSSPAPLVGFGGERVIPEGRIELPVTFGSGPKSVTKMVDFLVVNYT 421
           WTAYKAMDL EKVLKSSPAPLVGFGGERVI EGRIELPVTFGSGPK VTKMVDFLVVNYT
Sbjct: 182 WTAYKAMDLEEKVLKSSPAPLVGFGGERVISEGRIELPVTFGSGPKGVTKMVDFLVVNYT 241

Query: 422 SSYNAILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTST 481
           SSYN ILGR TMHML+ IPSTYHQSMKFPTPGGV EIKGEQRVSRECYYTSMR NDRTST
Sbjct: 242 SSYNEILGRLTMHMLKVIPSTYHQSMKFPTPGGVXEIKGEQRVSRECYYTSMRGNDRTST 275

Query: 482 KGGC 486
           KGGC
Sbjct: 302 KGGC 275

[Close]

BLAST of Moc06g42060 vs. ExPASy TrEMBL
Match: A0A6J1CTS4 (uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014147 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 3.0e-130
Identity = 245/292 (83.90%), Postives = 246/292 (84.25%), Query Frame = 0


Query: 194 MEIKDQRLLKWPERMKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEY 253
           MEIKDQRLLKWPERMKAPSAKRSK RYCLFHR HGHATQDCFDLKEEVEGLIRRGYLKEY
Sbjct: 1   MEIKDQRLLKWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 254 VEEPKVTQNDESDKSPAREIRTIMGGPIERESGRKRKADVGEARTSREQNEVYHAYTTNR 313
           VEEPK TQN ESDKSPAREIRTIMGGPIERESGRKRKADV EART REQNE         
Sbjct: 61  VEEPKATQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQNE--------- 120

Query: 314 PVTIEFSEDEATHLLHPHNDALVITLKIANVKVHRVLVDGDSSADIISWTAYKAMDLGEK 373
                                      IANVKVHRVLVDG S ADI+SWTAYKAMDLGEK
Sbjct: 121 ---------------------------IANVKVHRVLVDGGSLADILSWTAYKAMDLGEK 180

Query: 374 VLKSSPAPLVGFGGERVIPEGRIELPVTFGSGPKSVTKMVDFLVVNYTSSYNAILGRPTM 433
           VLKSSPAPLVGFGGERVIPEGRIE PVTFGSGPKSVTKMVD LVVNYTSSYNAILGRPTM
Sbjct: 181 VLKSSPAPLVGFGGERVIPEGRIEXPVTFGSGPKSVTKMVDXLVVNYTSSYNAILGRPTM 240

Query: 434 HMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGGC 486
           HMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGGC
Sbjct: 241 HMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGGC 256

[Close]

BLAST of Moc06g42060 vs. ExPASy TrEMBL
Match: A0A6J1D8C9 (uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018300 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 3.9e-130
Identity = 234/299 (78.26%), Postives = 261/299 (87.29%), Query Frame = 0


Query: 187 VPIEQVLMEIKDQRLLKWPERMKAPSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIR 246
           VP+EQVLMEIK QRLL+WPERM AP +KRSKGRYCLFHRDH HATQDCFDLK+EV+ LI+
Sbjct: 2   VPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQ 61

Query: 247 RGYLKEYVEEPKVTQNDESD-KSPAREIRTIMGGPIERESGRKRKADVGEARTSREQNEV 306
           RGYLKEYVE+PK TQN E+D KSPAREIRTIMGGP+ERE GRKRKA + E RTS+ Q+E+
Sbjct: 62  RGYLKEYVEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEI 121

Query: 307 YHAYTTNRPVTIEFSEDEATHLLHPHNDALVITLKIANVKVHRVLVDGDSSADIISWTAY 366
           YH +   +P  IEFSEDEATHLLHPHND LVITLKIAN KVHR+LVDG SSADIIS TAY
Sbjct: 122 YHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGGSSADIISLTAY 181

Query: 367 KAMDLGEKVLKSSPAPLVGFGGERVIPEGRIELPVTFGSGPKSVTKMVDFLVVNYTSSYN 426
           KAMDLGE+  KSSPA LV F GERVIPEGR EL VTFGSGPKS+T ++DFLV++Y SSYN
Sbjct: 182 KAMDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSITTIMDFLVIDYASSYN 241

Query: 427 AILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRDNDRTSTKGG 485
           AILGRPT+HML+AIPSTYHQS+ FPT GG+GEIK EQRVSRECYYTSM+ NDR ST GG
Sbjct: 242 AILGRPTIHMLKAIPSTYHQSINFPTHGGIGEIKEEQRVSRECYYTSMKGNDRASTAGG 300

The following BLAST results are available for this feature:

BLAST of Moc06g42060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	2.8e-215	87.70	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	1.5e-144	82.83	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_022156748.1	1.6e-130	80.26	uncharacterized protein LOC111023587 [Momordica charantia]	[more]
XP_022144467.1	6.2e-130	83.90	uncharacterized protein LOC111014147 [Momordica charantia]	[more]
XP_022150028.1	8.1e-130	78.26	uncharacterized protein LOC111018300 [Momordica charantia]	[more]

BLAST of Moc06g42060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g42060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	1.8e-215	87.70	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	7.3e-145	82.83	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DRG9	7.9e-131	80.26	uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CTS4	3.0e-130	83.90	uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1D8C9	3.9e-130	78.26	uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Moc06g42060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 47..138 e-value: 2.6E-13 score: 50.1
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 322..453 e-value: 9.8E-9 score: 37.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..301
None	No IPR available	PANTHER	PTHR33240:SF7	GAG-PRO-LIKE PROTEIN	coord: 318..461
None	No IPR available	PANTHER	PTHR33240	OS08G0508500 PROTEIN	coord: 318..461
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 337..434 e-value: 8.02876E-14 score: 65.0504

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g42060.1	Moc06g42060.1	mRNA