Moc06g42050 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g42050
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein SPIRRIG
Location	chr6: 33004525 .. 33005091 (+)
RNA-Seq Expression	Moc06g42050
Synteny	Moc06g42050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACCAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTGTCAAGAGGAGGCTGAACTTGGGCGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAACCAGCCAAACCAAGAGCGTCAGGAGGGGTTGCCCGAGGTGCAGGCATTAACGACCCCTGAGCCATTCCAGAAGCAGTTCGCGGTCTTGGAAGATAAGGTAGAGGGCATGCTTCAACGCATGACCCAAGTCCTTCGACAATTCGAGCGACATGAGTCCGACGAAGTGCCCCTTGTCAGAGACCCGAAAAAGGGGAAGGGCCCAGCGGAAAGCGATACCGAGGAGTCAACGAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAATACCAGGCGACGAACCCGAATTTTCGACCCTCGAAAGACGAAAAAGCAACATAAATCCCCGGCACCAAATGGGGGCAAGAGCGACCATGATGATAGAAACTCTGAACCGATAAGTCTCGACAAAGGCAAACCGGCAGATCGGCCAGAGTCATTGGAGAAGCGACATAGCCACAAGGAGAAGGGATTCGACCTCGAATAA

mRNA sequence

ATGACACCAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTGTCAAGAGGAGGCTGAACTTGGGCGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAACCAGCCAAACCAAGAGCGTCAGGAGGGGTTGCCCGAGGTGCAGGCATTAACGACCCCTGAGCCATTCCAGAAGCAGTTCGCGGTCTTGGAAGATAAGGTAGAGGGCATGCTTCAACGCATGACCCAAGTCCTTCGACAATTCGAGCGACATGAGTCCGACGAAGTGCCCCTTGTCAGAGACCCGAAAAAGGGGAAGGGCCCAGCGGAAAGCGATACCGAGGAGTCAACGAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAATACCAGGCGACGAACCCGAATTTTCGACCCTCGAAAGACGAAAAAGCAACATAAATCCCCGGCACCAAATGGGGGCAAGAGCGACCATGATGATAGAAACTCTGAACCGATAAGTCTCGACAAAGGCAAACCGGCAGATCGGCCAGAGTCATTGGAGAAGCGACATAGCCACAAGGAGAAGGGATTCGACCTCGAATAA

Coding sequence (CDS)

ATGACACCAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTGTCAAGAGGAGGCTGAACTTGGGCGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAACCAGCCAAACCAAGAGCGTCAGGAGGGGTTGCCCGAGGTGCAGGCATTAACGACCCCTGAGCCATTCCAGAAGCAGTTCGCGGTCTTGGAAGATAAGGTAGAGGGCATGCTTCAACGCATGACCCAAGTCCTTCGACAATTCGAGCGACATGAGTCCGACGAAGTGCCCCTTGTCAGAGACCCGAAAAAGGGGAAGGGCCCAGCGGAAAGCGATACCGAGGAGTCAACGAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAATACCAGGCGACGAACCCGAATTTTCGACCCTCGAAAGACGAAAAAGCAACATAAATCCCCGGCACCAAATGGGGGCAAGAGCGACCATGATGATAGAAACTCTGAACCGATAAGTCTCGACAAAGGCAAACCGGCAGATCGGCCAGAGTCATTGGAGAAGCGACATAGCCACAAGGAGAAGGGATTCGACCTCGAATAA

Protein sequence

MTPERSPRRSDDNCSVKRRLNLGDPQVGGPEDGTNQPNQERQEGLPEVQALTTPEPFQKQFAVLEDKVEGMLQRMTQVLRQFERHESDEVPLVRDPKKGKGPAESDTEESTNSAGSKLRIGGNTRRRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSHKEKGFDLE

Homology

[Close]

BLAST of Moc06g42050 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 164/188 (87.23%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSVKRRLNLGDPQVGGPEDGTNQPNQERQEGLPEVQALTTPEPFQKQ 60
           MTPERSPRRSDDNCS KRRLNL DPQVGGPEDGT+QPN ERQEGLPE  ALTTPEP QKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFERHESDEVPLVRDPKKGKGPAESDTEESTNSAGSKLRI 120
           FAVLEDKVEGMLQRMTQVLRQ+ER ESDEVPLVRDP+KGKGPA+S+TEESTNSAGSKLRI
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 GGNTRRRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSH 180
           GGNTRRRT+IFD +K KKQHK  APNGG+SDHDDRNSEP+SLDKGKPAD+PES EKRH+ 
Sbjct: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180

Query: 181 KEKGFDLE 189
           KEKGFDLE
Sbjct: 181 KEKGFDLE 188

[Close]

BLAST of Moc06g42050 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 303.9 bits (777), Expect = 9.6e-79
Identity = 160/188 (85.11%), Postives = 163/188 (86.70%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSVKRRLNLGDPQVGGPEDGTNQPNQERQEGLPEVQALTTPEPFQKQ 60
           MTPERSPRRSDD+CS KRRLNLGDPQVGGPEDGT+QPNQERQEGL E  ALTTPEPFQKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFERHESDEVPLVRDPKKGKGPAESDTEESTNSAGSKLRI 120
           FAVLEDK                  ESDEVPLVRDPKKGKGP ESDTEESTNS GSKLRI
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRI 120

Query: 121 GGNTRRRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSH 180
           GGNTR+RTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPES EKRHSH
Sbjct: 121 GGNTRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSH 170

Query: 181 KEKGFDLE 189
           KEKGFDLE
Sbjct: 181 KEKGFDLE 170

[Close]

BLAST of Moc06g42050 vs. NCBI nr
Match: XP_022155816.1 (protein SPIRRIG [Momordica charantia])

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-24
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 84  RHESDEVPLVRDPKKGKGPAESDTEESTNSAGSKLRIGGNTRRRTRIFDPR---KTKKQH 143
           R E+ EVPL R P+KGKGP ES++EESTNS GS+LR+  N +RRT+ FD R   K KKQ 
Sbjct: 5   RTEAGEVPLFRGPRKGKGPIESESEESTNSVGSRLRLEENIKRRTQNFDSRGQQKDKKQQ 64

Query: 144 KSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSHKEKGFDLE 189
           KSP P+GGKS+HD +N+EPI LDK K  DRPE  E++ S KEKGFDLE
Sbjct: 65  KSPVPDGGKSNHDKQNAEPIDLDKDKSTDRPELSERQQSKKEKGFDLE 112

[Close]

BLAST of Moc06g42050 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-18
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 125 RRRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSHKEKG 184
           RRRTRIFD +K KKQHKS APNG K+DHD+RNSEPISL+KGKP DRPES EKRH+ KEKG
Sbjct: 12  RRRTRIFDSQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKG 71

Query: 185 FDLE 189
           FDLE
Sbjct: 72  FDLE 75

[Close]

BLAST of Moc06g42050 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 9.7e-15
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 138 KQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSHKEKGFDLE 189
           +QHKSPAPNGGKSDH+DR+SEPISLDKGKPADRPES EKRH+ K+KGFDLE
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLE 91

[Close]

BLAST of Moc06g42050 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.6e-85
Identity = 164/188 (87.23%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSVKRRLNLGDPQVGGPEDGTNQPNQERQEGLPEVQALTTPEPFQKQ 60
           MTPERSPRRSDDNCS KRRLNL DPQVGGPEDGT+QPN ERQEGLPE  ALTTPEP QKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFERHESDEVPLVRDPKKGKGPAESDTEESTNSAGSKLRI 120
           FAVLEDKVEGMLQRMTQVLRQ+ER ESDEVPLVRDP+KGKGPA+S+TEESTNSAGSKLRI
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 GGNTRRRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSH 180
           GGNTRRRT+IFD +K KKQHK  APNGG+SDHDDRNSEP+SLDKGKPAD+PES EKRH+ 
Sbjct: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180

Query: 181 KEKGFDLE 189
           KEKGFDLE
Sbjct: 181 KEKGFDLE 188

[Close]

BLAST of Moc06g42050 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 160/188 (85.11%), Postives = 163/188 (86.70%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSVKRRLNLGDPQVGGPEDGTNQPNQERQEGLPEVQALTTPEPFQKQ 60
           MTPERSPRRSDD+CS KRRLNLGDPQVGGPEDGT+QPNQERQEGL E  ALTTPEPFQKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQFERHESDEVPLVRDPKKGKGPAESDTEESTNSAGSKLRI 120
           FAVLEDK                  ESDEVPLVRDPKKGKGP ESDTEESTNS GSKLRI
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRI 120

Query: 121 GGNTRRRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSH 180
           GGNTR+RTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPES EKRHSH
Sbjct: 121 GGNTRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSH 170

Query: 181 KEKGFDLE 189
           KEKGFDLE
Sbjct: 181 KEKGFDLE 170

[Close]

BLAST of Moc06g42050 vs. ExPASy TrEMBL
Match: A0A6J1DSV3 (protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-24
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 84  RHESDEVPLVRDPKKGKGPAESDTEESTNSAGSKLRIGGNTRRRTRIFDPR---KTKKQH 143
           R E+ EVPL R P+KGKGP ES++EESTNS GS+LR+  N +RRT+ FD R   K KKQ 
Sbjct: 5   RTEAGEVPLFRGPRKGKGPIESESEESTNSVGSRLRLEENIKRRTQNFDSRGQQKDKKQQ 64

Query: 144 KSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSHKEKGFDLE 189
           KSP P+GGKS+HD +N+EPI LDK K  DRPE  E++ S KEKGFDLE
Sbjct: 65  KSPVPDGGKSNHDKQNAEPIDLDKDKSTDRPELSERQQSKKEKGFDLE 112

[Close]

BLAST of Moc06g42050 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 125 RRRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSHKEKG 184
           RRRTRIFD +K KKQHKS APNG K+DHD+RNSEPISL+KGKP DRPES EKRH+ KEKG
Sbjct: 12  RRRTRIFDSQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKG 71

Query: 185 FDLE 189
           FDLE
Sbjct: 72  FDLE 75

[Close]

BLAST of Moc06g42050 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-15
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 138 KQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESLEKRHSHKEKGFDLE 189
           +QHKSPAPNGGKSDH+DR+SEPISLDKGKPADRPES EKRH+ K+KGFDLE
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLE 91

The following BLAST results are available for this feature:

BLAST of Moc06g42050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145129.1	2.0e-84	87.23	uncharacterized protein LOC111014646 [Momordica charantia]	[more]
XP_022158830.1	9.6e-79	85.11	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022155816.1	2.3e-24	62.96	protein SPIRRIG [Momordica charantia]	[more]
XP_022159109.1	4.2e-18	81.25	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022142767.1	9.7e-15	86.27	uncharacterized protein LOC111012805 [Momordica charantia]	[more]

BLAST of Moc06g42050 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g42050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUA7	9.6e-85	87.23	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DWY0	4.6e-79	85.11	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DSV3	1.1e-24	62.96	protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1	[more]
A0A6J1E1E7	2.0e-18	81.25	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	4.7e-15	86.27	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Moc06g42050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g42050.1	Moc06g42050.1	mRNA