Moc06g41970 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g41970
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L18
Location	chr6: 32931023 .. 32933148 (-)
RNA-Seq Expression	Moc06g41970
Synteny	Moc06g41970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCTTCTCAATCTACTTATTCACTGCTTCCTTTTCTTAAGTTTACTTCCTCCCGTGGTTGATTTTATTTTCTTTCCATGGGAACTTGTTGCGGTTATTAGGGGATCGATCTCGTCGCAGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCAGATGATATCTACCTCAAGTTACTCGTCAAGGTACTTGCTAAGCGAGATTTCTCTTTCAAATGCGCCTTTCTTTGATTTATCAGTTGCTTAATTATGCTTGATTTTATGTGGGTTTTGTTTTGTCGTTCTTATAATTGTTTATGTATATCGGATGTTGGTTGCCGAACTAGTCGTCGTAAGATAGTATTGCGTTAGAACATCTTTGAGGTGGTATGTGCGACTCACATTGAAAGATCAATTGAAATTTCGGTTGATTTATTGGGTTTGAAAACGCAATATTTTGATTATTTTGGTCTCCCTGTTATGGGTTTGTTTGATTAATTTGAATTTATGTCGTTAAATCTATCGCCTTATTTTGTTTTTGTTTGTACGAATGAATTTAATGGCTGGCCTTTCTGCTTTGATGATATTTGTGAATCCCAGCTCATGATGAGACCTTTCGTAGGTCGGGGAATAGTATTTTGCCCACAATATCAGAGCCTTAAGTCCAGTTTTATTTGGTTTATTACATGTTTCCATGATTGAAGCTATTATTGAATTTACTATTTGGTGATTAGTATCTATGCAAATATAAGCATCCTTTTTAACTACATTTGATGTTCTGTTCTAGTTTTTGTAGATATTAAATGCTATGATTTGATATCTACACTATATTATTTTTTCGGCATGTAATGTTAGTATGCCTTGATAATAAAATTTTATACTTTTTGTCTTTGATTCTACTTTTGAAAAAACAAAATGTTCCCAGTGATGATTATCTTGACCATGCTAATTCTGATCACTTTCTGATTGATCATTTATTTGAATGTTCTGAGGGAACTGGCTCCAAGCTTTTAGACAAGTTTTCATGCTCATTTACATTTCTTGCGTTTCTATGTTATTTATTGCTTTCAAATAGGAATACATTTATGAAAGGCAGTACATTATTTTCCCTCTGACATGTGCTATTTTTCAACTGTTCAGAATTCTTTTCCTTTTCATATCATGAGGGTCCCTTCCTCTAATTTTGTTTTGTGTGTGCACTTTGGTTATGAACTTAGTGTATCTAATGTCAGTATTCTGTTTGTGCTTGAGAGAGAAGCATTGTTGTCACATGAGCATATGGTTGTCCTCCTTGCCTGCAAAGACACATATTCATCTAACTTGCATTCACTAATAAAATGATGCCTTGTCTATCTTATCAGCTTTACCGCTTCCTTGTTCGCCGCACTGGAAGCAAATTCAATGCGGTCATTCTCAAGCGTTTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCACTCTCTAGACTTATCCAGTTTACAAAAGGAAAGGTTAGTTGAATCATGTAATATTTTAAAATTATTTTCTTGGTTTTTTGATGATTGTGCATGTCTGAGATGTCTGTAACTTTTTCATTTTTGGTTATTTTAATAGGAAAGCAAGATTGCCGTCGTTGTTGGTACTATTACCGATGATATTCGTGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTGAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAATACGGTATGGCGTTTCTTGTGGATTTTCTTCATTTAGATTAATAACTTTGTTAGGGTATTAATTTCTTTCATAATGTTCCGAGTCAACCTGTTTCATGTTCAAGTTATTTGTCCATTTGAATTCTAAGCACCGTGAGCTATTTTTAAGCTGGGAGCAATTTTGAGCTTTCCCTGAGAGGAATTAATATTCTTTTGGTGCATTTGCAGGTTCTCCTTAGAGGTTCCAAGAATTCCCGAGAGGCTGTGAAGCATTTCGGTCCTGCACCGGGTGTACCGCACAGTCACACCAAACCATATGTGAGGTCCAAGGGAAGAAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGTTTTAGGGTTTAA

mRNA sequence

ATGGGGATCGATCTCGTCGCAGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCAGATGATATCTACCTCAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTTCGCCGCACTGGAAGCAAATTCAATGCGGTCATTCTCAAGCGTTTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCACTCTCTAGACTTATCCAGTTTACAAAAGGAAAGGAAAGCAAGATTGCCGTCGTTGTTGGTACTATTACCGATGATATTCGTGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTGAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAATACGGTTCTCCTTAGAGGTTCCAAGAATTCCCGAGAGGCTGTGAAGCATTTCGGTCCTGCACCGGGTGTACCGCACAGTCACACCAAACCATATGTGAGGTCCAAGGGAAGAAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGTTTTAGGGTTTAA

Coding sequence (CDS)

ATGGGGATCGATCTCGTCGCAGGAGGTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCAGATGATATCTACCTCAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTTCGCCGCACTGGAAGCAAATTCAATGCGGTCATTCTCAAGCGTTTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCACTCTCTAGACTTATCCAGTTTACAAAAGGAAAGGAAAGCAAGATTGCCGTCGTTGTTGGTACTATTACCGATGATATTCGTGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTGAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAATACGGTTCTCCTTAGAGGTTCCAAGAATTCCCGAGAGGCTGTGAAGCATTTCGGTCCTGCACCGGGTGTACCGCACAGTCACACCAAACCATATGTGAGGTCCAAGGGAAGAAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGTTTTAGGGTTTAA

Protein sequence

MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

Homology

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BLAST of Moc06g41970 vs. NCBI nr
Match: XP_022135844.1 (60S ribosomal protein L18-2-like [Momordica charantia])

HSP 1 Score: 360.9 bits (925), Expect = 6.6e-96
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRGFRV
Sbjct: 181 NSRGFRV 187

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BLAST of Moc06g41970 vs. NCBI nr
Match: XP_022968796.1 (60S ribosomal protein L18-2-like [Cucurbita maxima] >XP_023515957.1 60S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

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BLAST of Moc06g41970 vs. NCBI nr
Match: XP_022961537.1 (60S ribosomal protein L18-2-like [Cucurbita moschata] >KAG7023990.1 60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

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BLAST of Moc06g41970 vs. NCBI nr
Match: KAG6590454.1 (60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

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BLAST of Moc06g41970 vs. NCBI nr
Match: XP_022969995.1 (60S ribosomal protein L18-2 [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 2.1e-94
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 28  MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 87

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 88  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 147

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 148 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 207

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 208 NSRGYRV 214

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BLAST of Moc06g41970 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 8.9e-88
Identity = 162/187 (86.63%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT SKFN VILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

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BLAST of Moc06g41970 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 7.5e-87
Identity = 161/187 (86.10%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ S FNAVILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Moc06g41970 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 8.1e-81
Identity = 153/184 (83.15%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 4   DLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLS 63
           DL AGGK+KKTKRT+PKS+DIYLKLLVKLYRFLVRRT S FNAVILKRLFMS+VN+PPLS
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 64  LSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFD 123
           LSRLI++ +GKE KI VVVG +TDDIRVY+VP +KV AL+FTETARARI+KAGGECLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 124 QLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSR 183
           QLALR PL  +TVLLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFE+ARG+R SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

Query: 184 GFRV 188
           GFRV
Sbjct: 181 GFRV 183

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BLAST of Moc06g41970 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 288.1 bits (736), Expect = 7.1e-77
Identity = 146/188 (77.66%), Postives = 165/188 (87.77%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRT PKSDD+YLKLLVK  R+LVRRT SKFNAVILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI KAGGECL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 121 TFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 180
           TFDQLAL  P   +NTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVR  G+K E ARG+
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 181 RNSRGFRV 188
           R SRGF+V
Sbjct: 181 RRSRGFKV 188

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BLAST of Moc06g41970 vs. ExPASy Swiss-Prot
Match: Q4GXG7 (60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.9e-64
Identity = 122/188 (64.89%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGID +     +K +RT PKS D+YL+LLVKLYR+L RRTG+KFN +ILKRLFMS++ +P
Sbjct: 1   MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRP 60

Query: 61  PLSLSRLIQFTK--GKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGE 120
           P+SLS++++F K  G+E   AV+VGT+TDD R++E+P L + ALR T+TARA I KAGGE
Sbjct: 61  PISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGE 120

Query: 121 CLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 180
            +TFDQLALR+P G  TVLL+G +N+REAVKHFGPAPGVPHSH KP VRSKGRKFERARG
Sbjct: 121 VITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFERARG 180

Query: 181 KRNSRGFR 187
           +R S G++
Sbjct: 181 RRRSCGYK 187

[Close]

BLAST of Moc06g41970 vs. ExPASy TrEMBL
Match: A0A6J1C2L8 (60S ribosomal protein L18-2-like OS=Momordica charantia OX=3673 GN=LOC111007696 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.2e-96
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRGFRV
Sbjct: 181 NSRGFRV 187

[Close]

BLAST of Moc06g41970 vs. ExPASy TrEMBL
Match: A0A6J1HVV8 (60S ribosomal protein L18-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467927 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.1e-95
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Moc06g41970 vs. ExPASy TrEMBL
Match: A0A6J1HAG3 (60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462085 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.8e-95
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVP LKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPPLKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Moc06g41970 vs. ExPASy TrEMBL
Match: A0A6J1I1I5 (60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP
Sbjct: 28  MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 87

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 88  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 147

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 148 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 207

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 208 NSRGYRV 214

[Close]

BLAST of Moc06g41970 vs. ExPASy TrEMBL
Match: A0A6J1EUD5 (60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.9e-94
Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSRVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSRVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGFRV 188
           NSRG+RV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Moc06g41970 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 324.3 bits (830), Expect = 6.3e-89
Identity = 162/187 (86.63%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT SKFN VILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Moc06g41970 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 321.2 bits (822), Expect = 5.4e-88
Identity = 161/187 (86.10%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ S FNAVILKRLFMS+VNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGFRV 188
            SRGF+V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Moc06g41970 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 8.1e-52
Identity = 100/135 (74.07%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 54  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113
           MS+VNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGFRV 188
            E ARG+R SRGF+V
Sbjct: 121 IEIARGRRRSRGFKV 135

[Close]

BLAST of Moc06g41970 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 8.1e-52
Identity = 100/135 (74.07%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 54  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113
           MS+VNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGFRV 188
            E ARG+R SRGF+V
Sbjct: 121 IEIARGRRRSRGFKV 135

The following BLAST results are available for this feature:

BLAST of Moc06g41970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135844.1	6.6e-96	100.00	60S ribosomal protein L18-2-like [Momordica charantia]	[more]
XP_022968796.1	4.2e-95	98.93	60S ribosomal protein L18-2-like [Cucurbita maxima] >XP_023515957.1 60S ribosoma...	[more]
XP_022961537.1	1.6e-94	98.40	60S ribosomal protein L18-2-like [Cucurbita moschata] >KAG7023990.1 60S ribosoma...	[more]
KAG6590454.1	1.6e-94	98.40	60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022969995.1	2.1e-94	98.40	60S ribosomal protein L18-2 [Cucurbita maxima]	[more]

BLAST of Moc06g41970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42791	8.9e-88	86.63	60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2	[more]
Q940B0	7.5e-87	86.10	60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1	[more]
O65729	8.1e-81	83.15	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV...	[more]
O22254	7.1e-77	77.66	Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P...	[more]
Q4GXG7	6.9e-64	64.89	60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1	[more]

BLAST of Moc06g41970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2L8	3.2e-96	100.00	60S ribosomal protein L18-2-like OS=Momordica charantia OX=3673 GN=LOC111007696 ...	[more]
A0A6J1HVV8	2.1e-95	98.93	60S ribosomal protein L18-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467927 PE=...	[more]
A0A6J1HAG3	7.8e-95	98.40	60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462085 P...	[more]
A0A6J1I1I5	1.0e-94	98.40	60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=...	[more]
A0A6J1EUD5	3.9e-94	97.86	60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 P...	[more]

BLAST of Moc06g41970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05590.1	6.3e-89	86.63	ribosomal protein L18	[more]
AT5G27850.1	5.4e-88	86.10	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.1	8.1e-52	74.07	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.2	8.1e-52	74.07	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 2..187 e-value: 9.4E-95 score: 315.3
None	No IPR available	GENE3D	3.100.10.10		coord: 1..187 e-value: 4.1E-100 score: 334.8
None	No IPR available	PANTHER	PTHR10934:SF19	60S RIBOSOMAL PROTEIN L18-1-RELATED	coord: 1..186
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 1..186
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 20..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g41970.1	Moc06g41970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome