Moc06g41080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g41080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ethylene-responsive transcription factor ERF026-like
Location	chr6: 32198403 .. 32199110 (+)
RNA-Seq Expression	Moc06g41080
Synteny	Moc06g41080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACCAAAAGCTTCCAATTAATGACAGCCAAATGGACCAATCCCCTCATCAGCCAGCTCCTCCATCGCACCCCATTGACCCTTCCCCTCCTGTCCCCACATCCCAATTTCCAAAATCCAAAGAGCCTAATTCTTCTTCATCGTCCATGGCTTCCTCTATCTCCACCAAGAAGCATGCTTTGTATAGAGGAATCCGGTGTCGGAGCGGCAAATGGGTGTCCGAGATCCGTGAGCCCCGTAAGACTACTCGCATATGGCTCGGCACATTCCCTACCCCGGAGATGGCTGCTGCTGCTTACGACGTTGCCGCTCTCGCCCTCCGAGGCGGCGACGCTGTCCTCAACTTTCCTGCTTCTATTGGATCCTACCCTATTCCTCCTTCTACCTCGCCGGTGGATATACGTACTGCTGCCTCTGCTGCTGCCGCTATCGCTGCCAATAATGCGTTGAAGAAGGGGGAGGCCGTGGGGCAATCCGCCGGTGGTGGTAGTGTTGAAGATACGACGACGACCGTTGCTACCGATAGTACTACGACGTCGCCAGAGTTTGTGGATGAGGAGGAACTCTTTGGGATGCCGAGTTTGCTGGCGGACATGGCGGAGGGGATGATGGTGTCGCCGCCGAATGAGCGCCGTTCGATGACTCGATGGAGAATTCTGATGGAACGGAAAGTTTATGGAGCTACTTCTGATAAATTGAAGTAA

mRNA sequence

ATGGCTGACCAAAAGCTTCCAATTAATGACAGCCAAATGGACCAATCCCCTCATCAGCCAGCTCCTCCATCGCACCCCATTGACCCTTCCCCTCCTGTCCCCACATCCCAATTTCCAAAATCCAAAGAGCCTAATTCTTCTTCATCGTCCATGGCTTCCTCTATCTCCACCAAGAAGCATGCTTTGTATAGAGGAATCCGGTGTCGGAGCGGCAAATGGGTGTCCGAGATCCGTGAGCCCCGTAAGACTACTCGCATATGGCTCGGCACATTCCCTACCCCGGAGATGGCTGCTGCTGCTTACGACGTTGCCGCTCTCGCCCTCCGAGGCGGCGACGCTGTCCTCAACTTTCCTGCTTCTATTGGATCCTACCCTATTCCTCCTTCTACCTCGCCGGTGGATATACGTACTGCTGCCTCTGCTGCTGCCGCTATCGCTGCCAATAATGCGTTGAAGAAGGGGGAGGCCGTGGGGCAATCCGCCGGTGGTGGTAGTGTTGAAGATACGACGACGACCGTTGCTACCGATAGTACTACGACGTCGCCAGAGTTTGTGGATGAGGAGGAACTCTTTGGGATGCCGAGTTTGCTGGCGGACATGGCGGAGGGGATGATGGTGTCGCCGCCGAATGAGCGCCGTTCGATGACTCGATGGAGAATTCTGATGGAACGGAAAGTTTATGGAGCTACTTCTGATAAATTGAAGTAA

Coding sequence (CDS)

ATGGCTGACCAAAAGCTTCCAATTAATGACAGCCAAATGGACCAATCCCCTCATCAGCCAGCTCCTCCATCGCACCCCATTGACCCTTCCCCTCCTGTCCCCACATCCCAATTTCCAAAATCCAAAGAGCCTAATTCTTCTTCATCGTCCATGGCTTCCTCTATCTCCACCAAGAAGCATGCTTTGTATAGAGGAATCCGGTGTCGGAGCGGCAAATGGGTGTCCGAGATCCGTGAGCCCCGTAAGACTACTCGCATATGGCTCGGCACATTCCCTACCCCGGAGATGGCTGCTGCTGCTTACGACGTTGCCGCTCTCGCCCTCCGAGGCGGCGACGCTGTCCTCAACTTTCCTGCTTCTATTGGATCCTACCCTATTCCTCCTTCTACCTCGCCGGTGGATATACGTACTGCTGCCTCTGCTGCTGCCGCTATCGCTGCCAATAATGCGTTGAAGAAGGGGGAGGCCGTGGGGCAATCCGCCGGTGGTGGTAGTGTTGAAGATACGACGACGACCGTTGCTACCGATAGTACTACGACGTCGCCAGAGTTTGTGGATGAGGAGGAACTCTTTGGGATGCCGAGTTTGCTGGCGGACATGGCGGAGGGGATGATGGTGTCGCCGCCGAATGAGCGCCGTTCGATGACTCGATGGAGAATTCTGATGGAACGGAAAGTTTATGGAGCTACTTCTGATAAATTGAAGTAA

Protein sequence

MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPPNERRSMTRWRILMERKVYGATSDKLK

Homology

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BLAST of Moc06g41080 vs. NCBI nr
Match: XP_022159560.1 (ethylene-responsive transcription factor ERF026-like [Momordica charantia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKH 60
           MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKH
Sbjct: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKH 60

Query: 61  ALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPAS 120
           ALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPAS
Sbjct: 61  ALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPAS 120

Query: 121 IGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTT 180
           IGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTT
Sbjct: 121 IGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTT 180

Query: 181 SPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           SPEFVDEEELFGMPSLLADMAEGMMVSPP
Sbjct: 181 SPEFVDEEELFGMPSLLADMAEGMMVSPP 209

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BLAST of Moc06g41080 vs. NCBI nr
Match: XP_038906460.1 (ethylene-responsive transcription factor ERF027-like [Benincasa hispida])

HSP 1 Score: 235.3 bits (599), Expect = 5.2e-58
Identity = 147/230 (63.91%), Postives = 168/230 (73.04%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPI-DPSPPVPTSQF--PKSKE-------------- 60
           MADQKLP+N+SQ+DQS   P P S PI +  P VPTSQ   PKS+E              
Sbjct: 1   MADQKLPVNESQIDQSLQNPLPISKPIPNIDPFVPTSQIPNPKSQEGEGEAKQPSLLQKL 60

Query: 61  ----PNSSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAA 120
               P+S +SS+ SS STKKH+ YRGIRCRSGKWVSEIREPRKTTRIWLGTFPT EMAAA
Sbjct: 61  PPPPPSSMASSLTSSSSTKKHSSYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTAEMAAA 120

Query: 121 AYDVAALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQ 180
           AYDVAALALRGGDAVLNFPASI +YP+P STSPVDIRTAASAAAA    NA+KK  +   
Sbjct: 121 AYDVAALALRGGDAVLNFPASIPTYPVPASTSPVDIRTAASAAAA----NAVKKAASSTL 180

Query: 181 SAGGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           +    +++D+  T+       + EFVDEEE+FGMP LLADMAEGMMVSPP
Sbjct: 181 TVDISAMKDSGNTM-----MGAEEFVDEEEIFGMPGLLADMAEGMMVSPP 221

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BLAST of Moc06g41080 vs. NCBI nr
Match: KAG7016947.1 (Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.8 bits (582), Expect = 4.9e-56
Identity = 142/229 (62.01%), Postives = 159/229 (69.43%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSP---PVPTSQF-------------PKSKEP 60
           M DQKLP+N  Q+ Q+P  P  PS P   +P   P P +Q              P    P
Sbjct: 1   MGDQKLPMN--QLSQTPIDPLVPSVPTSQNPNPNPNPNTQVAEPRALVQELPPPPPPPPP 60

Query: 61  NSSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVA 120
           +S +SS+ SS STKKH+LYRGIRCRSGKWVSEIREPRKT RIWLGTFPTPEMAAAAYDVA
Sbjct: 61  SSMASSITSSSSTKKHSLYRGIRCRSGKWVSEIREPRKTKRIWLGTFPTPEMAAAAYDVA 120

Query: 121 ALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGG 180
           ALALRG DAVLNFPASI SYPIP STSP+DIR AAS AAA +A N LKK E         
Sbjct: 121 ALALRGDDAVLNFPASIPSYPIPASTSPIDIRAAASTAAAASAANTLKKVE-----GACS 180

Query: 181 SVEDTTTTVATDSTTT----SPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           +++DT      D + T    + EFVDEEE+FGMPSLLADMAEGMMVSPP
Sbjct: 181 NIDDTKIITVEDCSNTTLLKTEEFVDEEEIFGMPSLLADMAEGMMVSPP 222

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BLAST of Moc06g41080 vs. NCBI nr
Match: XP_022922354.1 (ethylene-responsive transcription factor ERF027-like [Cucurbita moschata] >KAG6579479.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-55
Identity = 141/229 (61.57%), Postives = 159/229 (69.43%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSP---PVPTSQF-------------PKSKEP 60
           M DQKLP+N  ++ Q+P  P  PS P   +P   P P +Q              P    P
Sbjct: 1   MGDQKLPMN--ELSQTPIDPLVPSVPTSQNPNPNPNPNTQVAEPRALVQELPPPPPPPPP 60

Query: 61  NSSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVA 120
           +S +SS+ SS STKKH+LYRGIRCRSGKWVSEIREPRKT RIWLGTFPTPEMAAAAYDVA
Sbjct: 61  SSMASSITSSSSTKKHSLYRGIRCRSGKWVSEIREPRKTKRIWLGTFPTPEMAAAAYDVA 120

Query: 121 ALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGG 180
           ALALRG DAVLNFPASI SYPIP STSP+DIR AAS AAA +A N LKK E         
Sbjct: 121 ALALRGDDAVLNFPASIPSYPIPASTSPIDIRAAASTAAAASAANTLKKVE-----GACS 180

Query: 181 SVEDTTTTVATDSTTT----SPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           +++DT      D + T    + EFVDEEE+FGMPSLLADMAEGMMVSPP
Sbjct: 181 NIDDTKIITVEDCSNTTLLKTEEFVDEEEIFGMPSLLADMAEGMMVSPP 222

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BLAST of Moc06g41080 vs. NCBI nr
Match: XP_023551467.1 (ethylene-responsive transcription factor ERF027-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 7.1e-55
Identity = 137/213 (64.32%), Postives = 149/213 (69.95%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKH 60
           M DQKLP+N  ++  +P  P  PS P   SP   T        P        SS STKKH
Sbjct: 1   MGDQKLPMN--ELSPTPVDPLVPSVPTSQSPNPNTQAAAPQALPQELPPPPPSSSSTKKH 60

Query: 61  ALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPAS 120
           +LYRGIRCRSGKWVSEIREPRKT RIWLGTFPTPEMAAAAYDVAALALRG DAVLNFPAS
Sbjct: 61  SLYRGIRCRSGKWVSEIREPRKTKRIWLGTFPTPEMAAAAYDVAALALRGDDAVLNFPAS 120

Query: 121 IGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTT 180
           I SYPIP STSP+DIRTAAS AAA +A N LKK E         ++EDT      D + T
Sbjct: 121 IPSYPIPASTSPIDIRTAASTAAAASAANTLKKVEGT-----RSNIEDTKIITVEDCSNT 180

Query: 181 ----SPEFVDEEELFGMPSLLADMAEGMMVSPP 210
               + EFVDEEE+FGMPSLLADMAEGMMVSPP
Sbjct: 181 TLLKTEEFVDEEEIFGMPSLLADMAEGMMVSPP 206

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BLAST of Moc06g41080 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.4e-43
Identity = 100/154 (64.94%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 58  KKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNF 117
           KK+ +YRGIRCRSGKWVSEIREP+KTTR+WLGT+PTPEMAAAAYDVAALAL+GGD +LNF
Sbjct: 85  KKNPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNF 144

Query: 118 PASIGSYPIPPSTSPVDIRTAASAAAAI--AANNALKKGEAVGQSAGGGSVEDTTTTVAT 177
           P S+GSYPIP S+S   IR AA+AAAA   AA  A+K G+           ED     A 
Sbjct: 145 PDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQ---------KKEDKVYDTAE 204

Query: 178 DSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPP 210
            ST     FVDEEEL  MP LLADMA+GMMV+PP
Sbjct: 205 SSTM---GFVDEEELLNMPGLLADMAKGMMVAPP 226

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BLAST of Moc06g41080 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-40
Identity = 97/169 (57.40%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 46  SSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAA 105
           +SS + A   S +K  +YRGIRCRSGKWVSEIREPRKTTRIWLGT+P  EMAAAAYDVAA
Sbjct: 2   NSSMASAGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAA 61

Query: 106 LALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAI----AANNALKKGEAVGQSA 165
           +AL+G +AVLNFP S+GSYP+P STS  DIR AA+AAAA+          K  E    S+
Sbjct: 62  MALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSS 121

Query: 166 GGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPPN 211
              + E         S+    EF+DEEE+  MP+LLA+MAEGMMV+PP+
Sbjct: 122 KSRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPS 170

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BLAST of Moc06g41080 vs. ExPASy Swiss-Prot
Match: Q9FJ90 (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-33
Identity = 94/186 (50.54%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 26  PIDPSPPV-PTSQFPKSKEPNSSSSSMASSIS-TKKHALYRGIRCRSGKWVSEIREPRKT 85
           P D SP   P S    S  P+  S +  ++   + KH+++RGIR R+GKWVSEIREPRKT
Sbjct: 26  PTDQSPQTSPGSSSSPSPRPSGGSPARRTATGLSGKHSIFRGIRLRNGKWVSEIREPRKT 85

Query: 86  TRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAA 145
           TRIWLGT+P PEMAAAAYDVAALAL+G DAVLNFP    +Y  P S S  DIR AAS AA
Sbjct: 86  TRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAASRAA 145

Query: 146 AIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEG 205
            +   +     E V +    G  E+          + S EF+DEE +  MP+LL +MAEG
Sbjct: 146 EMKQPDQ-GGDEKVLEPVQPGKEEELE---EVSCNSCSLEFMDEEAMLNMPTLLTEMAEG 205

Query: 206 MMVSPP 210
           M++SPP
Sbjct: 206 MLMSPP 207

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BLAST of Moc06g41080 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 59  KHALYRGIRCR--SGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLN 118
           +H LYRG+R R  S KWVSEIREPRK  RIWLGTF TPEMAA AYDVAALAL+G  A LN
Sbjct: 11  RHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELN 70

Query: 119 FPASIGSYPIPPSTSPVDIRTAASAAAAI--AANNALKKGEAVGQSAGGGSVEDTTTTVA 178
           FP S+ S P P S SP DI+ AA++AAA   AA +A+       Q++G   +       +
Sbjct: 71  FPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMN------S 130

Query: 179 TDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           +   T    F+DE+ +F MP++L +MAEGM++SPP
Sbjct: 131 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPP 159

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BLAST of Moc06g41080 vs. ExPASy Swiss-Prot
Match: A2WZI4 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica OX=39946 GN=DREB1F PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 77/167 (46.11%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 59  KHALYRGIRCRSG--KWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRG-GDAVL 118
           +H +YRG+R R+G  +WV E+REP+   RIWLGT+PTPEMAA A+DVAA+ALRG   A L
Sbjct: 43  RHPVYRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAEL 102

Query: 119 NFPASIGSYPIPPSTSPVDIRTAASAAAAIAANN----ALKKGEAVGQSAGGGSVEDTTT 178
           NFP S  + P   + SP DIR AA+ AA +        AL +    G S GG +      
Sbjct: 103 NFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGAT------ 162

Query: 179 TVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPPNERRSMTRW 219
                S   +  FVDE+ +F MP L+ DMA GMM++PP   RS+  W
Sbjct: 163 ---ATSGRPAAVFVDEDAIFDMPGLIDDMARGMMLTPPAIGRSLDDW 200

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BLAST of Moc06g41080 vs. ExPASy TrEMBL
Match: A0A6J1DZ30 (ethylene-responsive transcription factor ERF026-like OS=Momordica charantia OX=3673 GN=LOC111025942 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.2e-106
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKH 60
           MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKH
Sbjct: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKH 60

Query: 61  ALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPAS 120
           ALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPAS
Sbjct: 61  ALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPAS 120

Query: 121 IGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTT 180
           IGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTT
Sbjct: 121 IGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTT 180

Query: 181 SPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           SPEFVDEEELFGMPSLLADMAEGMMVSPP
Sbjct: 181 SPEFVDEEELFGMPSLLADMAEGMMVSPP 209

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BLAST of Moc06g41080 vs. ExPASy TrEMBL
Match: A0A6J1E354 (ethylene-responsive transcription factor ERF027-like OS=Cucurbita moschata OX=3662 GN=LOC111430369 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.3e-56
Identity = 141/229 (61.57%), Postives = 159/229 (69.43%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSP---PVPTSQF-------------PKSKEP 60
           M DQKLP+N  ++ Q+P  P  PS P   +P   P P +Q              P    P
Sbjct: 1   MGDQKLPMN--ELSQTPIDPLVPSVPTSQNPNPNPNPNTQVAEPRALVQELPPPPPPPPP 60

Query: 61  NSSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVA 120
           +S +SS+ SS STKKH+LYRGIRCRSGKWVSEIREPRKT RIWLGTFPTPEMAAAAYDVA
Sbjct: 61  SSMASSITSSSSTKKHSLYRGIRCRSGKWVSEIREPRKTKRIWLGTFPTPEMAAAAYDVA 120

Query: 121 ALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGG 180
           ALALRG DAVLNFPASI SYPIP STSP+DIR AAS AAA +A N LKK E         
Sbjct: 121 ALALRGDDAVLNFPASIPSYPIPASTSPIDIRAAASTAAAASAANTLKKVE-----GACS 180

Query: 181 SVEDTTTTVATDSTTT----SPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           +++DT      D + T    + EFVDEEE+FGMPSLLADMAEGMMVSPP
Sbjct: 181 NIDDTKIITVEDCSNTTLLKTEEFVDEEEIFGMPSLLADMAEGMMVSPP 222

[Close]

BLAST of Moc06g41080 vs. ExPASy TrEMBL
Match: A0A6J1HYE3 (ethylene-responsive transcription factor ERF027-like OS=Cucurbita maxima OX=3661 GN=LOC111469150 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 4.5e-55
Identity = 143/227 (63.00%), Postives = 159/227 (70.04%), Query Frame = 0


Query: 1   MADQKLPINDSQMDQSPHQPAPPSHPIDPSP---PVPTSQFPKSKE-----PNSSSSSMA 60
           M DQKLP+N  ++ Q+P  P  PS P   +P   P P +Q  + +      P    SSMA
Sbjct: 1   MGDQKLPMN--ELSQTPIDPFVPSVPTSQNPNPNPNPNTQEAEPRALVQELPPPPPSSMA 60

Query: 61  SSI------STKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAAL 120
           SSI      STKKH+LYRGIRCRSGKWVSEIREPRKT RIWLGTFPT EMAAAAYDVAAL
Sbjct: 61  SSITSSSSSSTKKHSLYRGIRCRSGKWVSEIREPRKTKRIWLGTFPTAEMAAAAYDVAAL 120

Query: 121 ALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSV 180
           ALRGGDAVLNFPASI SYPIP STSP+DIR AAS AAA +A NALKK E         ++
Sbjct: 121 ALRGGDAVLNFPASIPSYPIPASTSPIDIRAAASTAAAASAANALKKAE-----GACSNI 180

Query: 181 EDTTTTVATDSTTT----SPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           EDT      D + T    + EFVDEEE+F MPSLLADMAEGMMVSPP
Sbjct: 181 EDTKIITVEDCSNTTLLKTEEFVDEEEIFSMPSLLADMAEGMMVSPP 220

[Close]

BLAST of Moc06g41080 vs. ExPASy TrEMBL
Match: A0A0A0KKC4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G155560 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 2.4e-53
Identity = 145/234 (61.97%), Postives = 163/234 (69.66%), Query Frame = 0


Query: 1   MADQK-LPINDSQMDQS-PHQPAPPSH---PIDP--SPPVPTSQFPKSKE---------- 60
           MADQK LPIN+ Q+DQS  H+ + P     PIDP  S  VPT Q P SK           
Sbjct: 1   MADQKTLPINEGQIDQSLDHKSSSPISKPIPIDPFVSSSVPTPQNPNSKSQEQLPPPPPP 60

Query: 61  ----PNSSSSSMAS----SISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPE 120
               P+S  SS+ S    S + KKH+LYRGIRCRSGKWVSEIREPRKTTRIWLGTFPT E
Sbjct: 61  PPPPPSSLPSSIISPPPPSSTNKKHSLYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTAE 120

Query: 121 MAAAAYDVAALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGE 180
           MAA AYDVAALALRGGDAVLNFPASI +YP+P STSPVDIRTAAS AA  AA  A+KK  
Sbjct: 121 MAATAYDVAALALRGGDAVLNFPASIPTYPVPASTSPVDIRTAASTAAIAAAAKAVKKVS 180

Query: 181 AVGQSAGGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           +   S   G++ED +  +  +      EFVDEEE+FGMP LLADMAEGMMVSPP
Sbjct: 181 ST-SSVDVGTMEDCSKKMRIE------EFVDEEEIFGMPGLLADMAEGMMVSPP 227

[Close]

BLAST of Moc06g41080 vs. ExPASy TrEMBL
Match: A0A5A7TM11 (Ethylene-responsive transcription factor ERF027 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003000 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 148/233 (63.52%), Postives = 164/233 (70.39%), Query Frame = 0


Query: 1   MADQK-LPINDSQMDQS--PHQPAPPSHP--IDP--SPPVPTS-QFPKSKE--------- 60
           MADQK LPIN+S +DQS     P+P S P  IDP  S  VPT  Q P SK          
Sbjct: 1   MADQKALPINESLIDQSLDHKSPSPISKPILIDPFVSSSVPTDPQIPNSKSQEQLPPPPP 60

Query: 61  -PNSSSSSM------ASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEM 120
            P+S  SS+      +SS +TKKH+LYRGIRCRSGKWVSEIREPRKTTRIWLGTFPT EM
Sbjct: 61  PPSSLPSSIISPPPPSSSSTTKKHSLYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTAEM 120

Query: 121 AAAAYDVAALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEA 180
           AAAAYDVAALALRGGDAVLNFPASI +YP+P S SPVDIRTAAS AA  AA  A+KK  A
Sbjct: 121 AAAAYDVAALALRGGDAVLNFPASIPTYPVPASNSPVDIRTAASTAAIAAAAKAVKK-VA 180

Query: 181 VGQSAGGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPP 210
              S   G++ED +        T   +FVDEEE+FGMP LLADMAEGMMVSPP
Sbjct: 181 STSSVDVGTMEDGS------KKTGIEKFVDEEEIFGMPGLLADMAEGMMVSPP 226

[Close]

BLAST of Moc06g41080 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 7.3e-42
Identity = 97/169 (57.40%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 46  SSSSSMASSISTKKHALYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAA 105
           +SS + A   S +K  +YRGIRCRSGKWVSEIREPRKTTRIWLGT+P  EMAAAAYDVAA
Sbjct: 2   NSSMASAGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAA 61

Query: 106 LALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAAAI----AANNALKKGEAVGQSA 165
           +AL+G +AVLNFP S+GSYP+P STS  DIR AA+AAAA+          K  E    S+
Sbjct: 62  MALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSS 121

Query: 166 GGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPPN 211
              + E         S+    EF+DEEE+  MP+LLA+MAEGMMV+PP+
Sbjct: 122 KSRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPS 170

[Close]

BLAST of Moc06g41080 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 5.6e-34
Identity = 94/186 (50.54%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 26  PIDPSPPV-PTSQFPKSKEPNSSSSSMASSIS-TKKHALYRGIRCRSGKWVSEIREPRKT 85
           P D SP   P S    S  P+  S +  ++   + KH+++RGIR R+GKWVSEIREPRKT
Sbjct: 26  PTDQSPQTSPGSSSSPSPRPSGGSPARRTATGLSGKHSIFRGIRLRNGKWVSEIREPRKT 85

Query: 86  TRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPASIGSYPIPPSTSPVDIRTAASAAA 145
           TRIWLGT+P PEMAAAAYDVAALAL+G DAVLNFP    +Y  P S S  DIR AAS AA
Sbjct: 86  TRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAASRAA 145

Query: 146 AIAANNALKKGEAVGQSAGGGSVEDTTTTVATDSTTTSPEFVDEEELFGMPSLLADMAEG 205
            +   +     E V +    G  E+          + S EF+DEE +  MP+LL +MAEG
Sbjct: 146 EMKQPDQ-GGDEKVLEPVQPGKEEELE---EVSCNSCSLEFMDEEAMLNMPTLLTEMAEG 205

Query: 206 MMVSPP 210
           M++SPP
Sbjct: 206 MLMSPP 207

[Close]

BLAST of Moc06g41080 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 59  KHALYRGIRCR--SGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLN 118
           +H LYRG+R R  S KWVSEIREPRK  RIWLGTF TPEMAA AYDVAALAL+G  A LN
Sbjct: 11  RHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELN 70

Query: 119 FPASIGSYPIPPSTSPVDIRTAASAAAAI--AANNALKKGEAVGQSAGGGSVEDTTTTVA 178
           FP S+ S P P S SP DI+ AA++AAA   AA +A+       Q++G   +       +
Sbjct: 71  FPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMN------S 130

Query: 179 TDSTTTSPEFVDEEELFGMPSLLADMAEGMMVSPP 210
           +   T    F+DE+ +F MP++L +MAEGM++SPP
Sbjct: 131 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPP 159

[Close]

BLAST of Moc06g41080 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-27
Identity = 74/153 (48.37%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 59  KHALYRGIRCR-SGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNF 118
           +H +YRG+R R SGKWVSE+REP K TRIWLGTF T EMAA A+DVAALALRG  A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 119 PASIGSYPIPPSTSPVDIRTAASAAAAIAANNALKKGEAVGQSAGGGSVEDTTTTVATDS 178
             S     IP ST   DI+ AA+ AA    +      +    + G    E     + T  
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETC---DTTTTNHGLDMEETMVEAIYTPE 163

Query: 179 TTTSPEFVDEEELFGMPSLLADMAEGMMVSPPN 211
            +    ++DEE +FGMP+LL +MAEGM++ PP+
Sbjct: 164 QSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS 193

[Close]

BLAST of Moc06g41080 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 108.6 bits (270), Expect = 6.9e-24
Identity = 84/204 (41.18%), Postives = 111/204 (54.41%), Query Frame = 0


Query: 10  DSQMDQSPHQPAPPSHPIDPSPPVPTSQFPKSKEPNSSSSSMASSISTKKHALYRGIRCR 69
           DS +  S H+ +P S   + SP +  S  PK +       +        +H +YRG+R R
Sbjct: 10  DSFLSISDHR-SPVSDSSECSPKL-ASSCPKKR-------AGRKKFRETRHPIYRGVRQR 69

Query: 70  -SGKWVSEIREPRKTTRIWLGTFPTPEMAAAAYDVAALALRGGDAVLNFPASIGSYPIPP 129
            SGKWV E+REP K +RIWLGTFPT EMAA A+DVAALALRG  A LNF  S     IP 
Sbjct: 70  NSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 129

Query: 130 STSPVDIRTAASAAAAIAANNALKKGE---AVGQSAGGGSVEDTTTTVATDSTTTSPEFV 189
           +T P +I+ AAS AA    N    +G    A  + A G  V +       +       ++
Sbjct: 130 TTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGER--RAEEQNGGVFYM 189

Query: 190 DEEELFGMPSLLADMAEGMMVSPP 210
           D+E L GMP+   +MAEGM++ PP
Sbjct: 190 DDEALLGMPNFFENMAEGMLLPPP 202

The following BLAST results are available for this feature:

BLAST of Moc06g41080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159560.1	1.5e-105	100.00	ethylene-responsive transcription factor ERF026-like [Momordica charantia]	[more]
XP_038906460.1	5.2e-58	63.91	ethylene-responsive transcription factor ERF027-like [Benincasa hispida]	[more]
KAG7016947.1	4.9e-56	62.01	Dehydration-responsive element-binding protein 1C, partial [Cucurbita argyrosper...	[more]
XP_022922354.1	1.1e-55	61.57	ethylene-responsive transcription factor ERF027-like [Cucurbita moschata] >KAG65...	[more]
XP_023551467.1	7.1e-55	64.32	ethylene-responsive transcription factor ERF027-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of Moc06g41080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAN9	8.4e-43	64.94	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	1.0e-40	57.40	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJ90	7.9e-33	50.54	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SJR0	1.5e-31	52.90	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
A2WZI4	1.1e-26	46.11	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ...	[more]

BLAST of Moc06g41080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ30	7.2e-106	100.00	ethylene-responsive transcription factor ERF026-like OS=Momordica charantia OX=3...	[more]
A0A6J1E354	5.3e-56	61.57	ethylene-responsive transcription factor ERF027-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1HYE3	4.5e-55	63.00	ethylene-responsive transcription factor ERF027-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KKC4	2.4e-53	61.97	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G155560 PE=...	[more]
A0A5A7TM11	1.6e-52	63.52	Ethylene-responsive transcription factor ERF027 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Moc06g41080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12630.1	7.3e-42	57.40	Integrase-type DNA-binding superfamily protein	[more]
AT5G52020.1	5.6e-34	50.54	Integrase-type DNA-binding superfamily protein	[more]
AT2G36450.1	1.1e-32	52.90	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	2.3e-27	48.37	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	6.9e-24	41.18	C-repeat-binding factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 62..124 e-value: 1.4E-29 score: 114.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 63..110 e-value: 1.0E-10 score: 41.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 62..118 score: 20.336437
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 63..120 e-value: 2.21252E-18 score: 74.2303
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 62..120 e-value: 4.5E-21 score: 76.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..180
None	No IPR available	PANTHER	PTHR31985:SF218	ETHYLENE RESPONSE FACTOR	coord: 51..210
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 51..210
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 62..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g41080.1	Moc06g41080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity