Moc06g40420 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGTTCCTTGCTCCAGCCACTTCCACTTCCATTTGTGCTTCTCTAATCCACACCCACAACTCCATCATTGCCTCTCTCAAGGTACGCTTCTAATTTTTCAACTCTGTTTTCTTCTTTCTTCTACGATTTCAGTTTCGAATTTTTATCAAGAACTCCATTCTGTTTTGCCGTTTCTGTTTTGTTGGGTTGAAACGATTTCCGAAATTTGAAGTCAAATCTGCGGATGATGAAGAAACCCAATTGGGTTTTTTTTCATCACTCGAAATCCCCGTCTTGTTCATCCAATTTCTTTACGTTTATGCAAACCAATTACAGATCCTAGAATTATTCAACTGTTTACCTCAATTAATTCACCATTGTTTCTTATTGTTCAATTTTCTTGGCATCACTTGAATTAATTAAATCCAGTAGTTTCTAATCACTAAACTTTTTATCCTAATGGGTGATTTTTGAAATCCATCGTATCAGAGAAGAGAGAAGCTAGAGGGTGCTTTCGCGATAGAGATTTGGGATTGTGCACCAGGTATTTGTAGACAGGGGATTGCTAGTCTATGGACGCTTTACTTATTTGGTCTTTTCCGTTGAAAATTTATTGAATGAGTTTGCCTTAATAACCATTGGATATGGACTCAAAATTCGAGGTGTAATTTCTCTTTCATATATCCAACTTAATAAAATTATCAGCCGTTTTGTTCCTGCCTCCTCCAATGATTTTTCCGGGATAAGATGGCGCTGAAAGCGAAAACTCCTCTGGATAGTGGTTTCCGACCATATATTATGGTGGGGCTTTTTAGTTCATCTAAATTTTCTTGTTGATTGATATGTTTACTTCTGATCACGAAAGAAAAAAGGAAAGAAGGGAAATAAAAGATTTTAAGTAATTTTCTCCTTGTCATCTTGTGTATTTAATTAGTTAGGTCTGTGGCTACCTGTGTACATCAATTCCTTACCATTTTCTGATGGTTTATCTGAGACTCGAGTTTATCTTTTCTTTCAATCCTCATTTCAGTAAAACTTTTATCAGTTCTAGTCAGGAAGTACTGCTGGGTCATAGAGAAAATAGTATCATTTAATTTAATGCTCTTTACATTTCAAAACTGTCTATCTGTTCCTATTTTCATCTCTGGTTTTTACTGTGTTTTATGTAATCAGGCAAAACTAATTTAAAATACTTTATTATACTATTTATCTTTTAGAATGTCTAGGAGTATAGCTACTAGTGATGAAAGAGAGAGGCAAATCAAGGCTATTTGGGATGATGTTACTCTTGATTCCTTCATACATGTATGTGTTGGTGAAACTTTAAATGGGAATAGACCTCGTGGTCATTTTAGTAAGATTGGATGGAGAAATGTGGTTAAAAACTTCTATGAAAAGACCGGAAGAAATTACGGATACAAGCAACTTAAGAACAAATGGACAACACTCAAGAAAGATTGGCAAGTTTGGAATGATTTGGTTGGAACTGAGAAAGGATTAGAATGGGATCCTTTAAGACAAACAATTGAGGCAACTACTCAATGGTGGGATAACAAATTAAAGGTAATGAAATTGTATGAGGATTTTAGTTTTTAATGGTAGGTGTGAATGATCTAATAACATTACTATTACAAATATTCCTCTATAGGTTCTTCCTGAGGCTGCCAAATTCCGTGCGAGAGGACTACAAAATGTTGAGCTTTTAAACATTCTTTTCAAGGATGTTGCGGTCGATGGAGGAGCATGGGCCCCAACCCCATCGCAAGTTGTTTTACTTGATGCTACGAGCGATAAGGTCGAAGATTATAATGATGATACAATGGGAGACACAAACAACGAGAATGAGGAGTTTAACAATGTTGAAAGTAACACTAATGAGGTTAATACTAGTGGAACCTACTACACTCAAGGGAGCGAGAAGAAGAGGAAAAAGGTAGATTCAAAGGTTGGATCTTCTAAGTTGTTTGATGCATTAGATCGTCTTTGCGACGCCATAGAATATAGAAGAAGAGATTTACCAGGATGCAGTACTCTTGAAGTTATGGATACTTTAAGAGGCCTACCTGGGATAATAGAGGGTGATGAGTTGTATATGAAGGCTGCTGACATCCTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCTTTACAAAAGCCTGAGATACAAATCACATGGCTTAAGCAAAAACGATTTTGA ATGTGGTTCCTTGCTCCAGCCACTTCCACTTCCATTTGTGCTTCTCTAATCCACACCCACAACTCCATCATTGCCTCTCTCAAGAGAAGAGAGAAGCTAGAGGGTGCTTTCGCGATAGAGATTTGGGATTGTGCACCAGCTACTAGTGATGAAAGAGAGAGGCAAATCAAGGCTATTTGGGATGATGTTACTCTTGATTCCTTCATACATGTATGTGTTGGTGAAACTTTAAATGGGAATAGACCTCGTGGTCATTTTAGTAAGATTGGATGGAGAAATGTGGTTAAAAACTTCTATGAAAAGACCGGAAGAAATTACGGATACAAGCAACTTAAGAACAAATGGACAACACTCAAGAAAGATTGGCAAGTTTGGAATGATTTGGTTGGAACTGAGAAAGGATTAGAATGGGATCCTTTAAGACAAACAATTGAGGCAACTACTCAATGGTGGGATAACAAATTAAAGGTTCTTCCTGAGGCTGCCAAATTCCGTGCGAGAGGACTACAAAATGTTGAGCTTTTAAACATTCTTTTCAAGGATGTTGCGGTCGATGGAGGAGCATGGGCCCCAACCCCATCGCAAGTTGTTTTACTTGATGCTACGAGCGATAAGGTCGAAGATTATAATGATGATACAATGGGAGACACAAACAACGAGAATGAGGAGTTTAACAATGTTGAAAGTAACACTAATGAGGTTAATACTAGTGGAACCTACTACACTCAAGGGAGCGAGAAGAAGAGGAAAAAGGTAGATTCAAAGGTTGGATCTTCTAAGTTGTTTGATGCATTAGATCGTCTTTGCGACGCCATAGAATATAGAAGAAGAGATTTACCAGGATGCAGTACTCTTGAAGTTATGGATACTTTAAGAGGCCTACCTGGGATAATAGAGGGTGATGAGTTGTATATGAAGGCTGCTGACATCCTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCTTTACAAAAGCCTGAGATACAAATCACATGGCTTAAGCAAAAACGATTTTGA ATGTGGTTCCTTGCTCCAGCCACTTCCACTTCCATTTGTGCTTCTCTAATCCACACCCACAACTCCATCATTGCCTCTCTCAAGAGAAGAGAGAAGCTAGAGGGTGCTTTCGCGATAGAGATTTGGGATTGTGCACCAGCTACTAGTGATGAAAGAGAGAGGCAAATCAAGGCTATTTGGGATGATGTTACTCTTGATTCCTTCATACATGTATGTGTTGGTGAAACTTTAAATGGGAATAGACCTCGTGGTCATTTTAGTAAGATTGGATGGAGAAATGTGGTTAAAAACTTCTATGAAAAGACCGGAAGAAATTACGGATACAAGCAACTTAAGAACAAATGGACAACACTCAAGAAAGATTGGCAAGTTTGGAATGATTTGGTTGGAACTGAGAAAGGATTAGAATGGGATCCTTTAAGACAAACAATTGAGGCAACTACTCAATGGTGGGATAACAAATTAAAGGTTCTTCCTGAGGCTGCCAAATTCCGTGCGAGAGGACTACAAAATGTTGAGCTTTTAAACATTCTTTTCAAGGATGTTGCGGTCGATGGAGGAGCATGGGCCCCAACCCCATCGCAAGTTGTTTTACTTGATGCTACGAGCGATAAGGTCGAAGATTATAATGATGATACAATGGGAGACACAAACAACGAGAATGAGGAGTTTAACAATGTTGAAAGTAACACTAATGAGGTTAATACTAGTGGAACCTACTACACTCAAGGGAGCGAGAAGAAGAGGAAAAAGGTAGATTCAAAGGTTGGATCTTCTAAGTTGTTTGATGCATTAGATCGTCTTTGCGACGCCATAGAATATAGAAGAAGAGATTTACCAGGATGCAGTACTCTTGAAGTTATGGATACTTTAAGAGGCCTACCTGGGATAATAGAGGGTGATGAGTTGTATATGAAGGCTGCTGACATCCTTATCAAAAGAGAAAATAGAGAAATGTTTGTTGCTTTACAAAAGCCTGAGATACAAATCACATGGCTTAAGCAAAAACGATTTTGA MWFLAPATSTSICASLIHTHNSIIASLKRREKLEGAFAIEIWDCAPATSDERERQIKAIWDDVTLDSFIHVCVGETLNGNRPRGHFSKIGWRNVVKNFYEKTGRNYGYKQLKNKWTTLKKDWQVWNDLVGTEKGLEWDPLRQTIEATTQWWDNKLKVLPEAAKFRARGLQNVELLNILFKDVAVDGGAWAPTPSQVVLLDATSDKVEDYNDDTMGDTNNENEEFNNVESNTNEVNTSGTYYTQGSEKKRKKVDSKVGSSKLFDALDRLCDAIEYRRRDLPGCSTLEVMDTLRGLPGIIEGDELYMKAADILIKRENREMFVALQKPEIQITWLKQKRF Homology
BLAST of Moc06g40420 vs. NCBI nr
Match: XP_022159819.1 (L10-interacting MYB domain-containing protein-like [Momordica charantia] >XP_022159820.1 L10-interacting MYB domain-containing protein-like [Momordica charantia]) HSP 1 Score: 593.2 bits (1528), Expect = 1.4e-165 Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0
BLAST of Moc06g40420 vs. NCBI nr
Match: XP_038874429.1 (L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874430.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874431.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874432.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida]) HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-138 Identity = 249/292 (85.27%), Postives = 269/292 (92.12%), Query Frame = 0
BLAST of Moc06g40420 vs. NCBI nr
Match: XP_008436966.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo] >KAA0055085.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 488.4 bits (1256), Expect = 4.9e-134 Identity = 242/292 (82.88%), Postives = 266/292 (91.10%), Query Frame = 0
BLAST of Moc06g40420 vs. NCBI nr
Match: XP_004143736.1 (L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740845.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >KGN50325.1 hypothetical protein Csa_000493 [Cucumis sativus]) HSP 1 Score: 484.2 bits (1245), Expect = 9.3e-133 Identity = 238/291 (81.79%), Postives = 265/291 (91.07%), Query Frame = 0
BLAST of Moc06g40420 vs. NCBI nr
Match: XP_022929169.1 (L10-interacting MYB domain-containing protein-like [Cucurbita moschata] >XP_022929170.1 L10-interacting MYB domain-containing protein-like [Cucurbita moschata]) HSP 1 Score: 464.5 bits (1194), Expect = 7.6e-127 Identity = 238/299 (79.60%), Postives = 265/299 (88.63%), Query Frame = 0
BLAST of Moc06g40420 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.8e-28 Identity = 89/287 (31.01%), Postives = 143/287 (49.83%), Query Frame = 0
BLAST of Moc06g40420 vs. ExPASy TrEMBL
Match: A0A6J1DZU8 (L10-interacting MYB domain-containing protein-like OS=Momordica charantia OX=3673 GN=LOC111026126 PE=4 SV=1) HSP 1 Score: 593.2 bits (1528), Expect = 6.9e-166 Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0
BLAST of Moc06g40420 vs. ExPASy TrEMBL
Match: A0A5A7UN70 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00110 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.4e-134 Identity = 242/292 (82.88%), Postives = 266/292 (91.10%), Query Frame = 0
BLAST of Moc06g40420 vs. ExPASy TrEMBL
Match: A0A1S3AT15 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103482538 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.4e-134 Identity = 242/292 (82.88%), Postives = 266/292 (91.10%), Query Frame = 0
BLAST of Moc06g40420 vs. ExPASy TrEMBL
Match: A0A0A0KKV6 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167170 PE=4 SV=1) HSP 1 Score: 484.2 bits (1245), Expect = 4.5e-133 Identity = 238/291 (81.79%), Postives = 265/291 (91.07%), Query Frame = 0
BLAST of Moc06g40420 vs. ExPASy TrEMBL
Match: A0A6J1EN01 (L10-interacting MYB domain-containing protein-like OS=Cucurbita moschata OX=3662 GN=LOC111435828 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.7e-127 Identity = 238/299 (79.60%), Postives = 265/299 (88.63%), Query Frame = 0
BLAST of Moc06g40420 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 2.7e-29 Identity = 89/287 (31.01%), Postives = 143/287 (49.83%), Query Frame = 0
BLAST of Moc06g40420 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 2.7e-29 Identity = 89/287 (31.01%), Postives = 143/287 (49.83%), Query Frame = 0
BLAST of Moc06g40420 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 1.1e-22 Identity = 80/312 (25.64%), Postives = 137/312 (43.91%), Query Frame = 0
BLAST of Moc06g40420 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 2.4e-14 Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Moc06g40420 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 5.6e-11 Identity = 40/135 (29.63%), Postives = 66/135 (48.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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