Moc06g40230 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g40230
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	late embryogenesis abundant protein At5g17165-like
Location	chr6: 31449838 .. 31453932 (+)
RNA-Seq Expression	Moc06g40230
Synteny	Moc06g40230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGCCACTTCCAGGTTTATTGCTCGACGACTCGCCGATTTCGGGAAGCAGCCACGGCGCCCTGTTTCGCCTAATTCTTCTCTCTCCGCCGCCCTCAGCCTCAGGTATGCCCTAGCCCTGGCCTCGCCTCTGTTTTCTTTTTGTTTTTTCATCTTTGATCTTCTGATCATCCATTCATCTTCCTCCGAAATTAACTAGTTATCGGATTCGGAATTGGTAATCCATCGCTGCAATTTTTCAGAATTCTCTGTAGTGTAGTGTAGTGATTTGATTGATGCCTGAAATTTTGTTCGGAATCGGAATCAAACTCTTTCGTAATTTGGATCCACTGTATGATCTGTGTGCTTTGCAAAATTATTTTGATTCGAAGAGCGGGAAAACTGAAATCCATTTTGTATTGTTAAACAGATTTTCGAACTACTTGTGCTTTGATTATTACTTCGAAAGTACTTCTACATGTACTTTTTTCAATTTCAAACTCACCGCATTCTAAACTCCTCGAACGATCATTTTTGTGTCACAGTGATAATTCGGCCACTAATAGTTTGAAAATTTTATCTTGATTCTTTTAAATCAATTACCAATTAAATTTATATGGTGGAGTAAAATTTTTGTGTGTGTGTTGTTGAAAGGACTTATCTTCTAAAATTTAGTGCGTATTTATTAAAAACTTATGAATCAATACAAAATTATTTTAAAATATACATACTAAAGGTCTAAAGTGGAATATATTTAACCTTTAAAGGTTAAAGATGGAATTTAAACCACTTAAAATTCAATTCATTTATACTCTTGAATGTTTTTAATAAGGATTTTTTTAAAAGAATATTATACTAAAATAAGGAATTTGAACTTATAACCCATTTAGACATAGATGTTCCAATCAAAGTTTTATTCGCATTTAATACTAGCTTTTAGTTTTATTAAAGTTCTTTGGTAAATTCAATCATACTTTTACAACTTTATATGAATGTGTTTTTTAAAAAAGTATTTATTTATATTCCTATTTGAAGTTAGATCATCAATTTTCTTTAGTAACAATTTGTTTTATTGTTATGGTAAGAAAACATGACATGCTGTGATTAGATATAGCTCTTTCGTTTTAACAAACTAATATATTTGAAACATGTCATAAAAAAATTATAATAAATAATAGACTCCTTATTTTGCTAGCAAAAATGACTTTATAAATTTTGTTGGGTAAGAAAATAATTTAGTTATATTTGTCAAAATTTATTTATAACGATCATTTAAAAAAAAACCTAACTAACCACTACCTAACTAAGAAGGTATGAAATGTCAACCAAAATATAGTTTAATTGATTTAGGCACCTATATCCAATTAAAAAGGTTGTGTGTTCAAATCTCTACATTTATATGTTAGAACTCAAAAAGTTAATAATAATAAAAATTTATGAAAAAAAATTTCAGTATAATATTTTAAGATTTCAATTTATAATGGTCAATTAGTTGAATGGACTCTATAGATTATTCCTTTGCCTTTTCTTAGCATATGCTTTTTTTTTCCTTTATACTAAAAAAGTAAAAAGAATTATTAAATCTATTACAAAATCTAATCCATTGGACAAAGGACAGGCCATTGTCCAATATAGTCCGGACAACTGACACTATTTGTACTTTTTTGAGGTCTATTGTATTTTTTACTTTCAAATTGAAATATATTTTTAAATTTCATACTTGTCCTCAAATTTTTATGTTTTTCTGATTTTTTTTTTCTTGAATACATGTTTTTCTGATTTTAATCCTTATGCTTTTACGTACTTTTATTTCTATCCTCAAATTTTTGTAACGAGTTGTTTCAAGGTTCTTGGTTCTTTCTTTTTTCTTAATAAATAAAAGTAGAACCGCCTATGATAATTTTTTTCCTCATTTCTTGTGCTATCTTTAGAAAATATAGAAGTATGTTTGATAATCATAGCTTACTTTTAAATTTTTATTTTAAAAAATACATTTTCTTTAAAAAATTGTGTTGCAGTGTCTCACAGCATGCTGTGGACTAAATTCATTTTATATTCAAATTAGTTTTCCTTTGTAACATATTTTTTGTGTTGATCGGTTGTATTGTCCAAATTTAATTAATAGATAATACATTATAAGTCAAACTCACTTATTGTATATTTAATAAGAAAACTTTATCATCAGCCTGTTTGTATTATCTTGGATTTTAAGAATATATGACGTTTTCTATAATGATTTAAAATCATAATAAACTAGTTATTTAATTAAACTAATAATATTGATTTATGTCTAAAAAAGATTACTAATAATTTAAAATTATTAACTAACCAATATATATAATTTTAACTTACGTATAGAAGGAGGAATTCGAACCTCTAAATTATCTTAACTAGTTGAGATAAATTCAGGTCGACTAAAAGAGATAATTATTCTTTTAGTCAATAACAAGTTAAATTTCGATTCTATAACATAAATTTAATATATATATATATATATATATATATATATATATATATATATATATTAACAAATATTACAACTTTTCAATCTATTTCTGAATACAATATAAGTTTCACTTTTATATTAGTGTTTACATTACATTTAATTTTGATTTATATTTAAATTATGCTCTTTTTGTAAATTTTTAACCTTTCTACTATAAAATTGAGAATACGTTTTTATTTTATATTATTTAGGTAAATATCTCTTAACTAATACATGGGTAATAGATGATGGCCTTCCTAATTCGGTATTTTTTCAGTTTAGTTTCTATTCGCATTTTAATTAAACTCATAATTATGGGATGCATGATGCTGCACGTATGGGAGGGCCACTTTCTTTCTTCTTCTCTTTATTTATTTATTATTTATTTTTTGTCTTTTTGTATTTTAATCTTGTACATTATCTTTTTGTGTTAGGGTCGGCTATGGTATATTAATATAATCCACGTGGCTGTTTAATTTATTTTATCAATCTATACGAAGTCAAACTCACTTATTGTATATTTAATTAAGAAAATTTGTATGGATGGGCTTTTCTTTATAGTTAATATGTATATGGAATTTTAAAAATAAGACATTTTTTAACTTACGGCTGACTTTAGTTTTAATTTTTCTTTTATGAGTTCAAAGTATACATGGGCTGAGCATTCAACTTTTGAATTTTTTCGATAATATTTATCTTAATTAGTTGAGTTACGTTAAGATTGATTATGATTGATTTTAGTTTATGTATATAATAGTTCTTCTTATAATAATATAATCGAAAGTAAAAATATATAGGTAACTCAATTGGAGATGGAATTATATTTAAGTTATTAGTTGAGCAATATATATATTGCTCTAATAATTGATTTATTTTGATATTTAATGAATTAGATTAACTATATTAAAATTATAATTAGTTGGTTAATTCAAGGTTGACTTTTCCTTTCCGTGACCCTTGTTCTGGAAGGCACATCGGCACCCATCGGAGGTTCGTACAGTTGTGTCTTGATTTAAGTTTAACTAATATATCATTCCACTCATTTGTATTTTAACAGGTAGATACCTATTAATATCCTTGGTTACTTAAATAATGTTGATCTCCATGAAAAGGGTGATCGAGTTAGCTCATAATATCTTAGTTAGAGACGTAGATGTTAATTACCGTTGAGTTAAACTCGTATTGCTACAATTTCTAGCACGGTTTTACTCTGTTACATCACCCGTTTGCCGCATGTGACACCAATGGACAATCGGGAAGTACCAAATTAATTAATATGCATATATTGATCATGCAAAACCAATCTGACGGTTGTTTGAAAATAATTGACACAGGAGAGGAGGGCATTGGTCAGCAACAGCAACAGCATATGAGAAGAACACAGAGGATCAGGAAGTGTGCCCAACAGTGGTACCCGACCATGTGATATTCCACACAGAAGCTGCAGCCCAAAACCAAAACTACTGGGCGCCGCACCCACAAACTGGAGTATTTGGGCCACCCGCCCACCACACCGACTACTCACCATCGGCTTCGGCTTCCAAGGAGGGCTCGGTTCTGGACCTCAAGGCTTGGTTCCGCCACACCGCCCTCGAGGACGTCGACAAGGACGACCCACTACACTAA

mRNA sequence

ATGGCCGCCGCCACTTCCAGGTTTATTGCTCGACGACTCGCCGATTTCGGGAAGCAGCCACGGCGCCCTGTTTCGCCTAATTCTTCTCTCTCCGCCGCCCTCAGCCTCAGGAGAGGAGGGCATTGGTCAGCAACAGCAACAGCATATGAGAAGAACACAGAGGATCAGGAAGTGTGCCCAACAGTGGTACCCGACCATGTGATATTCCACACAGAAGCTGCAGCCCAAAACCAAAACTACTGGGCGCCGCACCCACAAACTGGAGTATTTGGGCCACCCGCCCACCACACCGACTACTCACCATCGGCTTCGGCTTCCAAGGAGGGCTCGGTTCTGGACCTCAAGGCTTGGTTCCGCCACACCGCCCTCGAGGACGTCGACAAGGACGACCCACTACACTAA

Coding sequence (CDS)

ATGGCCGCCGCCACTTCCAGGTTTATTGCTCGACGACTCGCCGATTTCGGGAAGCAGCCACGGCGCCCTGTTTCGCCTAATTCTTCTCTCTCCGCCGCCCTCAGCCTCAGGAGAGGAGGGCATTGGTCAGCAACAGCAACAGCATATGAGAAGAACACAGAGGATCAGGAAGTGTGCCCAACAGTGGTACCCGACCATGTGATATTCCACACAGAAGCTGCAGCCCAAAACCAAAACTACTGGGCGCCGCACCCACAAACTGGAGTATTTGGGCCACCCGCCCACCACACCGACTACTCACCATCGGCTTCGGCTTCCAAGGAGGGCTCGGTTCTGGACCTCAAGGCTTGGTTCCGCCACACCGCCCTCGAGGACGTCGACAAGGACGACCCACTACACTAA

Protein sequence

MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRHTALEDVDKDDPLH

Homology

[Close]

BLAST of Moc06g40230 vs. NCBI nr
Match: XP_022159632.1 (late embryogenesis abundant protein At5g17165-like [Momordica charantia])

HSP 1 Score: 277.3 bits (708), Expect = 6.8e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCP 60
           MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCP
Sbjct: 1   MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCP 60

Query: 61  TVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRH 120
           TVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRH
Sbjct: 61  TVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRH 120

Query: 121 TALEDVDKDDPLH 134
           TALEDVDKDDPLH
Sbjct: 121 TALEDVDKDDPLH 133

[Close]

BLAST of Moc06g40230 vs. NCBI nr
Match: KAG6605657.1 (ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.3 bits (277), Expect = 6.4e-21
Identity = 70/139 (50.36%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 1   MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEV 60
           MAAA++  IA   RLA F    RR       LS +L   R GHWS    AYEKN E +EV
Sbjct: 1   MAAASNLIIAARPRLAHFRNPLRR-------LSPSLFTLRAGHWS----AYEKNPE-EEV 60

Query: 61  CPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSP-----SASASKEGSVLD 120
           CPTVVPDH++      + +++YWAPHPQTGVFGPP   T ++P     S   +KEGSVL+
Sbjct: 61  CPTVVPDHMLH-----SLSEDYWAPHPQTGVFGPPT--TQHNPVPSDTSGGGAKEGSVLE 120

Query: 121 LKAWFRHTALEDVDKDDPL 133
           LK WFRH  LED +K   L
Sbjct: 121 LKVWFRHVELEDPEKPHSL 120

[Close]

BLAST of Moc06g40230 vs. NCBI nr
Match: XP_023532525.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-20
Identity = 71/139 (51.08%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 1   MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEV 60
           MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EV
Sbjct: 1   MAAASNLIIAARPRLAHLRNPLRR-------LSPSLFTLRAGHWS----AYEKNPE-EEV 60

Query: 61  CPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSP-----SASASKEGSVLD 120
           CPTVVPDH+I      + +++YWAPHPQTGVFGPP   T ++P     SA  +KEGSVL+
Sbjct: 61  CPTVVPDHMIH-----SISEDYWAPHPQTGVFGPPI--TQHNPVPSDTSAGGAKEGSVLE 120

Query: 121 LKAWFRHTALEDVDKDDPL 133
           LK WFRH  LED +K   L
Sbjct: 121 LKVWFRHVELEDPEKPHAL 120

[Close]

BLAST of Moc06g40230 vs. NCBI nr
Match: XP_022995249.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima])

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-20
Identity = 70/137 (51.09%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 1   MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEV 60
           MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EV
Sbjct: 1   MAAASNLIIAARPRLAHLRNPVRR-------LSPSLFTLRAGHWS----AYEKNPE-EEV 60

Query: 61  CPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSP---SASASKEGSVLDLK 120
           CPTVVPDH+I      + +++YWAPHPQTGVFGPP    +  P   SA  +KEGSVL+LK
Sbjct: 61  CPTVVPDHMIH-----SISEDYWAPHPQTGVFGPPISQHNPVPSDTSAGGAKEGSVLELK 120

Query: 121 AWFRHTALEDVDKDDPL 133
            WFRH  LED +K   L
Sbjct: 121 VWFRHIELEDPEKPHDL 120

[Close]

BLAST of Moc06g40230 vs. NCBI nr
Match: XP_022957877.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita moschata])

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-19
Identity = 68/131 (51.91%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 1   MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEV 60
           MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EV
Sbjct: 1   MAAASNLIIAARPRLAHLRNPLRR-------LSPSLFTLRAGHWS----AYEKNPE-EEV 60

Query: 61  CPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSP-----SASASKEGSVLD 120
           CPTVVPDH+I      + +++YWAPHPQTGVFGPP   T ++P     SA  +KEGSVL+
Sbjct: 61  CPTVVPDHMIH-----SLSEDYWAPHPQTGVFGPPI--TQHNPVPSDTSAGGAKEGSVLE 112

Query: 121 LKAWFRHTALE 125
           LK WFRH  LE
Sbjct: 121 LKVWFRHVELE 112

[Close]

BLAST of Moc06g40230 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-13
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 47  TAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASAS 106
           +AY+KN E +E+ P+ VPD +I        +  YW+PHPQTGVFGP +  T+        
Sbjct: 37  SAYDKNVE-EELQPSQVPDEMI-----KPDSDKYWSPHPQTGVFGPSSSSTNAKDEFRGG 96

Query: 107 KEGSVLDLKAWFRHTALEDVDK 129
           +E SV++ KAWFR T+LED+DK
Sbjct: 97  QEDSVMEEKAWFRPTSLEDLDK 112

[Close]

BLAST of Moc06g40230 vs. ExPASy TrEMBL
Match: A0A6J1E0C6 (late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=3673 GN=LOC111025983 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.3e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCP 60
           MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCP
Sbjct: 1   MAAATSRFIARRLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCP 60

Query: 61  TVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRH 120
           TVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRH
Sbjct: 61  TVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASASKEGSVLDLKAWFRH 120

Query: 121 TALEDVDKDDPLH 134
           TALEDVDKDDPLH
Sbjct: 121 TALEDVDKDDPLH 133

[Close]

BLAST of Moc06g40230 vs. ExPASy TrEMBL
Match: A0A6J1K564 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111490853 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.9e-21
Identity = 70/137 (51.09%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 1   MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEV 60
           MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EV
Sbjct: 1   MAAASNLIIAARPRLAHLRNPVRR-------LSPSLFTLRAGHWS----AYEKNPE-EEV 60

Query: 61  CPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSP---SASASKEGSVLDLK 120
           CPTVVPDH+I      + +++YWAPHPQTGVFGPP    +  P   SA  +KEGSVL+LK
Sbjct: 61  CPTVVPDHMIH-----SISEDYWAPHPQTGVFGPPISQHNPVPSDTSAGGAKEGSVLELK 120

Query: 121 AWFRHTALEDVDKDDPL 133
            WFRH  LED +K   L
Sbjct: 121 VWFRHIELEDPEKPHDL 120

[Close]

BLAST of Moc06g40230 vs. ExPASy TrEMBL
Match: A0A6J1H0D3 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111459285 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.7e-20
Identity = 68/131 (51.91%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 1   MAAATSRFIAR--RLADFGKQPRRPVSPNSSLSAALSLRRGGHWSATATAYEKNTEDQEV 60
           MAAA++  IA   RLA      RR       LS +L   R GHWS    AYEKN E +EV
Sbjct: 1   MAAASNLIIAARPRLAHLRNPLRR-------LSPSLFTLRAGHWS----AYEKNPE-EEV 60

Query: 61  CPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSP-----SASASKEGSVLD 120
           CPTVVPDH+I      + +++YWAPHPQTGVFGPP   T ++P     SA  +KEGSVL+
Sbjct: 61  CPTVVPDHMIH-----SLSEDYWAPHPQTGVFGPPI--TQHNPVPSDTSAGGAKEGSVLE 112

Query: 121 LKAWFRHTALE 125
           LK WFRH  LE
Sbjct: 121 LKVWFRHVELE 112

[Close]

BLAST of Moc06g40230 vs. ExPASy TrEMBL
Match: A0A5A7UIY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00300 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.9e-17
Identity = 53/100 (53.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 38  RGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHT 97
           R  HWS    AYEKN ED  + PT+VP+ VI H      + NYW PHPQTGVFGPP  H 
Sbjct: 39  RASHWS----AYEKNQED-PIWPTMVPNDVIHHN----LSDNYWVPHPQTGVFGPPKAHH 98

Query: 98  DYS-----PSASASKEGSVLDLKAWFRHTALEDVDKDDPL 133
           D S      SA  ++ GSVL+LKAWFRH  LED++K   L
Sbjct: 99  DSSTLPNDTSAGGNEGGSVLNLKAWFRHNGLEDLEKPHSL 129

[Close]

BLAST of Moc06g40230 vs. ExPASy TrEMBL
Match: A0A2I4FBB8 (late embryogenesis abundant protein At5g17165-like OS=Juglans regia OX=51240 GN=LOC108997224 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.0e-16
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 25  SPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPH 84
           S + SL +AL+LRR  H    A+ Y+KN ED    P+VVPDHVI       +++ YWAPH
Sbjct: 27  SRDPSLPSALTLRRAAH----ASVYDKNEEDH--TPSVVPDHVI-----QPESETYWAPH 86

Query: 85  PQTGVFGPPAHHTDYSPSASA-------SKEGSVLDLKAWFRHTALEDVDKDDPL 133
           PQTGVFGPPA     + S S          EGSVL+ KAWFRHT +ED +K   L
Sbjct: 87  PQTGVFGPPAEQNSAAASESGLPSSTVDGGEGSVLEQKAWFRHTNVEDSEKPHTL 130

[Close]

BLAST of Moc06g40230 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 47  TAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPHPQTGVFGPPAHHTDYSPSASAS 106
           +AY+KN E +E+ P+ VPD +I        +  YW+PHPQTGVFGP +  T+        
Sbjct: 37  SAYDKNVE-EELQPSQVPDEMI-----KPDSDKYWSPHPQTGVFGPSSSSTNAKDEFRGG 96

Query: 107 KEGSVLDLKAWFRHTALEDVDK 129
           +E SV++ KAWFR T+LED+DK
Sbjct: 97  QEDSVMEEKAWFRPTSLEDLDK 112

[Close]

BLAST of Moc06g40230 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 4.8e-14
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 25  SPNSSLSAALSLRRGGHWSATATAYEKNTEDQEVCPTVVPDHVIFHTEAAAQNQNYWAPH 84
           S  ++ SA    RR GH    ++AY+KN ED E+  + VPD VI        +  YW+PH
Sbjct: 25  STRATASALFPSRRSGH----SSAYDKNVED-ELHASAVPDEVI-----KPDSDKYWSPH 84

Query: 85  PQTGVFGPPAHHTDYSPSA-SASKEGSVLDLKAWFRHTALEDVDK 129
           P+TGVFGP    T++S +A  A ++ +VL+  AWFR T+LED DK
Sbjct: 85  PKTGVFGPST--TEHSATAEGAHQDTAVLEETAWFRPTSLEDSDK 117

The following BLAST results are available for this feature:

BLAST of Moc06g40230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159632.1	6.8e-71	100.00	late embryogenesis abundant protein At5g17165-like [Momordica charantia]	[more]
KAG6605657.1	6.4e-21	50.36	ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma su...	[more]
XP_023532525.1	1.1e-20	51.08	late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995249.1	1.4e-20	51.09	late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]	[more]
XP_022957877.1	1.6e-19	51.91	late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]	[more]

BLAST of Moc06g40230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KFM8	2.3e-13	46.34	Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Moc06g40230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0C6	3.3e-71	100.00	late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=367...	[more]
A0A6J1K564	6.9e-21	51.09	late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1H0D3	7.7e-20	51.91	late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662...	[more]
A0A5A7UIY1	7.9e-17	53.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A2I4FBB8	1.0e-16	48.70	late embryogenesis abundant protein At5g17165-like OS=Juglans regia OX=51240 GN=...	[more]

BLAST of Moc06g40230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17165.1	1.6e-14	46.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G03150.1	4.8e-14	43.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PFAM	PF03242	LEA_3	coord: 29..97 e-value: 3.7E-4 score: 21.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..106
None	No IPR available	PANTHER	PTHR35122:SF2	OSJNBA0093F12.14 PROTEIN	coord: 11..129
IPR039291	Late embryogenesis abundant protein At5g17165-like	PANTHER	PTHR35122	OSJNBA0093F12.14 PROTEIN	coord: 11..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g40230.1	Moc06g40230.1	mRNA