Moc06g38810 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g38810
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMYB transcription factor
Locationchr6: 30110609 .. 30112019 (-)
RNA-Seq ExpressionMoc06g38810
SyntenyMoc06g38810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTGAAACCGCGTCGCATAGAGGAAAGGTGAAGCACAGGAAGGGGCTATGGTCGCCTGAGGAAGACCAGAGGCTGAGAAACTACATCCTCAACCATGGCCATGGCTGCTGGAGCTCTCTTCCTCTCAAGGCTGGTCAGTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCATTTTTCGGTATTGACATTAAATTAGCATTTTTGTTTTTGGTATGGAATGAATGGCAGGATTGGAGAGAAATGGAAAGAGCTGTAGATTGAGGTGGATGAATTACTTGAGGCCTGGCCTTAAAAGAGGCACGTTTTCGCAGCAAGAGGAAGATACAGTTCTTGGCCTTCATCACATCCTTGGAAACAAGTAACCCAAATCCTCTCTCTCCCTCTCTACTTTCTCACACCTAACCTTTTTAATCATAATTTATGACAACTTTTCAATGCTAATTAACTAAAACCCAAATCAAATCATCATTGGTCGGAAGTTCAAATCTCTAATTCCAAATTGAAAGAAAAGAACTATGTCGGGGCTTAAGTTTGACATTTTATGTAATATATAGCTAGGTGACGTTAGTATAGGAGCGTGGAAATTTATGAATAATAACAGTTTAATACTATTTTGATCCCTGTATTACTTTTGATTTAGTTCATTTTGGTATTCGTACTCTTAAAACATCCGTTTGTCATCCATTTTAGTTCAATCATTTTTATTTTTATCTATTTTTTTATTATAATTTTAGCATGACATTACAATAATAGTTCACTCAATTTATTGAAATGTATCCATAAATTGATTGCTTTTTAATCTGTATTAAAGAATTTCATCCATTGTTTTGTAAATAGGAAAATACAATAACCAATCCAAAGCTACGAAAAGTTATATGGAGTGTCTATGCCTCCTCCTCTAATTGTTTATTTTTTTATTTTTTGATTTAGACTAATTAATTAAATTGGGATTTTGGATCAGGTGGTCTCAAATAGCACAGCATTTGCCGGGAAGAACCGACAACGAAGTAAAGAACTTGTGGCATTCCTACCTTAAAAAGAAACTCCAAAAACCAAAATCGCCTCAAAACAACCAAACAATTTCCACAGCTAATTCAGATTCCAATTCAGATCACTCCGTGGATTCCCCGAAATGCCCTCTGCCCAGGCTCTTCTTCGCCGAGTGGCTCGCCGCCGCCGATGCCGACATCGCCGCCGCCGGAACTGGGCTTTCTCAGAGGTTGGGATCGGACGGCGGCCAACCCACGGCGGTGATCGATTCTCAGGATCAGATTTCAACCAATGGGTTGCTGAATTATGCTTCTGCTGGGGATGATGTGTGTGTTCAACTTCTTCACTTTGGGAATATTTTATGTATATTTGAGGATCAATTCAAATATATATTTCCAGTAAATATTGATTTGTGA

mRNA sequence

ATGGGGTGTGAAACCGCGTCGCATAGAGGAAAGGTGAAGCACAGGAAGGGGCTATGGTCGCCTGAGGAAGACCAGAGGCTGAGAAACTACATCCTCAACCATGGCCATGGCTGCTGGAGCTCTCTTCCTCTCAAGGCTGGATTGGAGAGAAATGGAAAGAGCTGTAGATTGAGGTGGATGAATTACTTGAGGCCTGGCCTTAAAAGAGGCACGTTTTCGCAGCAAGAGGAAGATACAGTTCTTGGCCTTCATCACATCCTTGGAAACAAGTGGTCTCAAATAGCACAGCATTTGCCGGGAAGAACCGACAACGAAGTAAAGAACTTGTGGCATTCCTACCTTAAAAAGAAACTCCAAAAACCAAAATCGCCTCAAAACAACCAAACAATTTCCACAGCTAATTCAGATTCCAATTCAGATCACTCCGTGGATTCCCCGAAATGCCCTCTGCCCAGGCTCTTCTTCGCCGAGTGGCTCGCCGCCGCCGATGCCGACATCGCCGCCGCCGGAACTGGGCTTTCTCAGAGGTTGGGATCGGACGGCGGCCAACCCACGGCGGTGATCGATTCTCAGGATCAGATTTCAACCAATGGGTTGCTGAATTATGCTTCTGCTGGGGATGATGTGTGTGTTCAACTTCTTCACTTTGGGAATATTTTATGTATATTTGAGGATCAATTCAAATATATATTTCCAGTAAATATTGATTTGTGA

Coding sequence (CDS)

ATGGGGTGTGAAACCGCGTCGCATAGAGGAAAGGTGAAGCACAGGAAGGGGCTATGGTCGCCTGAGGAAGACCAGAGGCTGAGAAACTACATCCTCAACCATGGCCATGGCTGCTGGAGCTCTCTTCCTCTCAAGGCTGGATTGGAGAGAAATGGAAAGAGCTGTAGATTGAGGTGGATGAATTACTTGAGGCCTGGCCTTAAAAGAGGCACGTTTTCGCAGCAAGAGGAAGATACAGTTCTTGGCCTTCATCACATCCTTGGAAACAAGTGGTCTCAAATAGCACAGCATTTGCCGGGAAGAACCGACAACGAAGTAAAGAACTTGTGGCATTCCTACCTTAAAAAGAAACTCCAAAAACCAAAATCGCCTCAAAACAACCAAACAATTTCCACAGCTAATTCAGATTCCAATTCAGATCACTCCGTGGATTCCCCGAAATGCCCTCTGCCCAGGCTCTTCTTCGCCGAGTGGCTCGCCGCCGCCGATGCCGACATCGCCGCCGCCGGAACTGGGCTTTCTCAGAGGTTGGGATCGGACGGCGGCCAACCCACGGCGGTGATCGATTCTCAGGATCAGATTTCAACCAATGGGTTGCTGAATTATGCTTCTGCTGGGGATGATGTGTGTGTTCAACTTCTTCACTTTGGGAATATTTTATGTATATTTGAGGATCAATTCAAATATATATTTCCAGTAAATATTGATTTGTGA

Protein sequence

MGCETASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQKPKSPQNNQTISTANSDSNSDHSVDSPKCPLPRLFFAEWLAAADADIAAAGTGLSQRLGSDGGQPTAVIDSQDQISTNGLLNYASAGDDVCVQLLHFGNILCIFEDQFKYIFPVNIDL
Homology
BLAST of Moc06g38810 vs. NCBI nr
Match: XP_038888761.1 (transcription factor LAF1-like [Benincasa hispida])

HSP 1 Score: 275.8 bits (704), Expect = 3.5e-70
Identity = 148/256 (57.81%), Postives = 168/256 (65.62%), Query Frame = 0

Query: 1   MGCETASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWM 60
           MGCETASHR K KH KGLWSPEED+RLRNYIL HGHGCWSSLP KAGLERNGKSCRLRW+
Sbjct: 1   MGCETASHRTKSKHTKGLWSPEEDERLRNYILKHGHGCWSSLPPKAGLERNGKSCRLRWI 60

Query: 61  NYLRPGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK 120
           NYLRPGLKRG FSQ+E+DT+L LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKKK  K
Sbjct: 61  NYLRPGLKRGMFSQEEQDTILALHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKHYK 120

Query: 121 PKSPQNNQTISTANS-------DSNSDHSVDSPK---CPLPRLFFAEWLAAADADIAAAG 180
            +  Q + T ST NS        S ++ S+ SPK     LP+LFFAEWLA  +      G
Sbjct: 121 QQQKQPSSTYSTTNSTTSDSADSSTTNPSMGSPKPNNNSLPKLFFAEWLAPNNHSAGGWG 180

Query: 181 ----------------------TGLSQRLGSDGG---QPTAVIDSQ---DQISTNGLLNY 219
                                  G+    GS  G   Q   ++DS    + + +NG  +Y
Sbjct: 181 ICGSKFGPNLSIHQSVVGNNNLNGVDFEFGSSLGSELQNNGIMDSHLKLEDLISNGFASY 240

BLAST of Moc06g38810 vs. NCBI nr
Match: XP_008465864.1 (PREDICTED: transcription factor LAF1 [Cucumis melo] >KAA0038489.1 transcription factor LAF1 [Cucumis melo var. makuwa] >TYK03338.1 transcription factor LAF1 [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.6e-70
Identity = 149/243 (61.32%), Postives = 169/243 (69.55%), Query Frame = 0

Query: 5   TASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLR 64
           TASHR K KHRKGLWSP+EDQRLRNYILN+GHGCWSSLP KAGLERNGKSCRLRW+NYLR
Sbjct: 6   TASHRTKSKHRKGLWSPDEDQRLRNYILNYGHGCWSSLPSKAGLERNGKSCRLRWINYLR 65

Query: 65  PGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK---- 124
           PGLKRG FSQQE+ T+L LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKL K    
Sbjct: 66  PGLKRGMFSQQEQQTILSLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLDKQQQK 125

Query: 125 -PKSPQNNQTISTANSDSNSDHSVDSPK-----CPLPRLFFAEWLAAADADIAAAGTGLS 184
            P     N T S +   S ++ S+ SPK       LP+LFFAEWL    +D   +  G S
Sbjct: 126 QPSYSSTNSTTSDSADSSTTNPSIHSPKPNNNNSQLPKLFFAEWLTVGSSDNCGSEFGPS 185

Query: 185 -------------QRLGSDGGQPTAVI-DS----QDQISTNGLLNYASAGDDVCVQ-LLH 219
                          LGS+  Q   ++ DS    +D  ++NG  NYASAG DVCV+ LLH
Sbjct: 186 TNNLNGQPNFEFGMTLGSELLQNNGILMDSHVKFEDHHTSNGFANYASAG-DVCVEHLLH 245

BLAST of Moc06g38810 vs. NCBI nr
Match: XP_004148377.1 (transcription factor LAF1 [Cucumis sativus] >KGN60480.1 hypothetical protein Csa_001111 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 4.3e-68
Identity = 148/244 (60.66%), Postives = 167/244 (68.44%), Query Frame = 0

Query: 5   TASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLR 64
           TASHR K KHRKGLWSP+EDQRLRNYILN+GHGCWSSLP KAGLERNGKSCRLRW+NYLR
Sbjct: 6   TASHRTKSKHRKGLWSPDEDQRLRNYILNYGHGCWSSLPSKAGLERNGKSCRLRWINYLR 65

Query: 65  PGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQKPKSP 124
           PGLKRGTFSQQE+ T+L LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKL K +  
Sbjct: 66  PGLKRGTFSQQEQHTILSLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLDKQQQK 125

Query: 125 Q-----NNQTISTANSDSNSDHSVDSP-----KCPLPRLFFAEWLAAADADIAAAGTGLS 184
           Q      N T S +   S ++ S+ SP        LP+LFFAEWL    +    +  G S
Sbjct: 126 QAYHSSTNSTTSDSADSSTTNPSIHSPIPNNNISQLPKLFFAEWLTVGSSSNGGSEFGPS 185

Query: 185 --------------QRLGSDGGQPTAVI-DS----QDQISTNGLLNYASAGDDVCVQ-LL 219
                           LGS+  Q   +I DS    +D   +NG  NYAS G DVCV+ LL
Sbjct: 186 TTNNLIGQPNFEFGMSLGSELLQNNGIIMDSHVKFEDHHISNGFANYASDG-DVCVEHLL 245

BLAST of Moc06g38810 vs. NCBI nr
Match: XP_022995192.1 (transcription factor LAF1-like [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 5.6e-68
Identity = 133/227 (58.59%), Postives = 161/227 (70.93%), Query Frame = 0

Query: 1   MGCETASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWM 60
           MG ETASH+ K+KHRKGLWSPEEDQRLRN+ILNHGH CWSS+PLKAGLERNGKSCRLRW+
Sbjct: 1   MGRETASHKAKLKHRKGLWSPEEDQRLRNFILNHGHACWSSVPLKAGLERNGKSCRLRWI 60

Query: 61  NYLRPGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK 120
           NYLRPGLKRGTFSQQE+DT++ LHH+LGN+WSQIAQHLPGRTDNEVKNLWHSYLKKK++K
Sbjct: 61  NYLRPGLKRGTFSQQEQDTIISLHHMLGNRWSQIAQHLPGRTDNEVKNLWHSYLKKKVEK 120

Query: 121 PKSPQNNQTISTANSDSNSDHSVDSPKCPLPRLFFAEWLAAADADIAAAGTGLSQRLGSD 180
            +    + T ST +  ++S  +  S   P P+L FAEWLA A      + + + +  G  
Sbjct: 121 -QGCSAHSTASTTSESADSSITAQSMDSPKPKLLFAEWLAGAGTGFGQSFSSVHEGTGDL 180

Query: 181 GGQPTAVIDSQDQISTNGLL--NYASAGDDVC-------VQLLHFGN 219
            G          +I  NG +  ++    D +C        QLLHFGN
Sbjct: 181 NGTHLEGGGLGSEIQNNGFMMDSHIKFEDQICNGNYDCVDQLLHFGN 226

BLAST of Moc06g38810 vs. NCBI nr
Match: XP_023534576.1 (transcription factor LAF1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-67
Identity = 133/227 (58.59%), Postives = 160/227 (70.48%), Query Frame = 0

Query: 1   MGCETASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWM 60
           MG ETASH+ K KHRKGLWSPEEDQRLRN+ILNHGH CWSS+PLKAGLERNGKSCRLRW+
Sbjct: 1   MGRETASHKAKPKHRKGLWSPEEDQRLRNFILNHGHACWSSVPLKAGLERNGKSCRLRWI 60

Query: 61  NYLRPGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK 120
           NYLRPGLKRGTFSQQE+DT++ LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKK+++K
Sbjct: 61  NYLRPGLKRGTFSQQEQDTIISLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKRVEK 120

Query: 121 PKSPQNNQTISTANSDSNSDHSVDSPKCPLPRLFFAEWLAAADADIAAAGTGLSQRLGSD 180
            +    + T ST +  ++S  +  S   P P+L FAEWLA A      + + + +  G  
Sbjct: 121 -QGCSAHSTASTTSDSADSSITAQSMDSPKPKLLFAEWLAGAGIGFGQSFSSVHEGTGDL 180

Query: 181 GGQPTAVIDSQDQISTNGLL--NYASAGDDVC-------VQLLHFGN 219
            G          +I  NG +  ++    D +C        QLLHFGN
Sbjct: 181 NGTHLEGGGLGSEIQNNGFMMDSHMKFEDQICNGNYDCVDQLLHFGN 226

BLAST of Moc06g38810 vs. ExPASy Swiss-Prot
Match: Q9M0K4 (Transcription factor LAF1 OS=Arabidopsis thaliana OX=3702 GN=LAF1 PE=1 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 93/188 (49.47%), Postives = 125/188 (66.49%), Query Frame = 0

Query: 13  KHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLKRGTF 72
           +HRKGLWSPEED++LR++IL++GH CW+++P+KAGL+RNGKSCRLRW+NYLRPGLKR   
Sbjct: 9   RHRKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMI 68

Query: 73  SQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQKPKSPQNNQTIST 132
           S +EE+T+L  H  LGNKWSQIA+ LPGRTDNE+KN WHS+LKKK  K +S Q+ ++IS 
Sbjct: 69  SAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSLQDAKSISP 128

Query: 133 ANS-------------------------------------DSNSDHSVDSPKCP-LPRLF 163
            +S                                     +SN ++S      P +PRLF
Sbjct: 129 PSSSSSSLVACGKRNPETLISNHVFSFQRLLENKSSSPSQESNGNNSHQCSSAPEIPRLF 188

BLAST of Moc06g38810 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 179.1 bits (453), Expect = 5.9e-44
Identity = 88/158 (55.70%), Postives = 109/158 (68.99%), Query Frame = 0

Query: 1   MGCETASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWM 60
           MG  ++   G+ K RKGLWSPEED++L N+I+ HG GCWSS+P  A L R GKSCRLRW+
Sbjct: 1   MGRPSSGAVGQPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWI 60

Query: 61  NYLRPGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQ- 120
           NYLRP LKRG FSQQEED ++ LH ILGN+WSQIA HLPGRTDNE+KN W+S +KKKL+ 
Sbjct: 61  NYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQ 120

Query: 121 --------KPKSPQNNQTISTANSDSNSDHSVDSPKCP 150
                   KP +  +  T + A  D+  +     P CP
Sbjct: 121 QGIDPATHKPMASADTATAAAALPDAEEEDR--KPLCP 156

BLAST of Moc06g38810 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 84/136 (61.76%), Postives = 103/136 (75.74%), Query Frame = 0

Query: 11  KVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLKRG 70
           K K RKGLWSPEED++L  +I NHGHGCWSS+P  AGL+R GKSCRLRW+NYLRP LKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 71  TFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKL-QKPKSPQNNQT 130
            FS +EE+ ++ LH +LGN+WSQIA  LPGRTDNE+KNLW+S +KKKL Q+   P  ++ 
Sbjct: 69  AFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDPNTHKP 128

Query: 131 ISTANSDSNSDHSVDS 146
           IS   S S+ D    S
Sbjct: 129 ISEVESFSDKDKPTTS 144

BLAST of Moc06g38810 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.5e-43
Identity = 78/110 (70.91%), Postives = 90/110 (81.82%), Query Frame = 0

Query: 11  KVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLKRG 70
           K K RKGLWSPEED++L NYI  HGHGCWSS+P  AGL+R GKSCRLRW+NYLRP LKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 71  TFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK 121
            FSQ EE  ++ LH  LGN+WSQIA  LPGRTDNE+KN W+S LKKKL++
Sbjct: 69  AFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRR 118

BLAST of Moc06g38810 vs. ExPASy Swiss-Prot
Match: Q9C6U1 (Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.6e-41
Identity = 80/137 (58.39%), Postives = 103/137 (75.18%), Query Frame = 0

Query: 8   HRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGL 67
           +  K K RKGLWSP+ED++L  Y+L +G GCWS +   AGL R GKSCRLRW+NYLRP L
Sbjct: 24  NNNKPKLRKGLWSPDEDEKLIRYMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDL 83

Query: 68  KRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQKPKSPQNN 127
           KRG+FS QEED +  LH ILGN+WSQIA  LPGRTDNE+KN W+S LKK+L   K+  NN
Sbjct: 84  KRGSFSPQEEDLIFHLHSILGNRWSQIATRLPGRTDNEIKNFWNSTLKKRL---KNNSNN 143

Query: 128 QTISTANSDSNSDHSVD 145
            T S ++ ++++ +S+D
Sbjct: 144 NTSSGSSPNNSNSNSLD 157

BLAST of Moc06g38810 vs. ExPASy TrEMBL
Match: A0A5A7TAW6 (Transcription factor LAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6571G00140 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.2e-70
Identity = 149/243 (61.32%), Postives = 169/243 (69.55%), Query Frame = 0

Query: 5   TASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLR 64
           TASHR K KHRKGLWSP+EDQRLRNYILN+GHGCWSSLP KAGLERNGKSCRLRW+NYLR
Sbjct: 6   TASHRTKSKHRKGLWSPDEDQRLRNYILNYGHGCWSSLPSKAGLERNGKSCRLRWINYLR 65

Query: 65  PGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK---- 124
           PGLKRG FSQQE+ T+L LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKL K    
Sbjct: 66  PGLKRGMFSQQEQQTILSLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLDKQQQK 125

Query: 125 -PKSPQNNQTISTANSDSNSDHSVDSPK-----CPLPRLFFAEWLAAADADIAAAGTGLS 184
            P     N T S +   S ++ S+ SPK       LP+LFFAEWL    +D   +  G S
Sbjct: 126 QPSYSSTNSTTSDSADSSTTNPSIHSPKPNNNNSQLPKLFFAEWLTVGSSDNCGSEFGPS 185

Query: 185 -------------QRLGSDGGQPTAVI-DS----QDQISTNGLLNYASAGDDVCVQ-LLH 219
                          LGS+  Q   ++ DS    +D  ++NG  NYASAG DVCV+ LLH
Sbjct: 186 TNNLNGQPNFEFGMTLGSELLQNNGILMDSHVKFEDHHTSNGFANYASAG-DVCVEHLLH 245

BLAST of Moc06g38810 vs. ExPASy TrEMBL
Match: A0A1S3CRA7 (transcription factor LAF1 OS=Cucumis melo OX=3656 GN=LOC103503453 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.2e-70
Identity = 149/243 (61.32%), Postives = 169/243 (69.55%), Query Frame = 0

Query: 5   TASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLR 64
           TASHR K KHRKGLWSP+EDQRLRNYILN+GHGCWSSLP KAGLERNGKSCRLRW+NYLR
Sbjct: 6   TASHRTKSKHRKGLWSPDEDQRLRNYILNYGHGCWSSLPSKAGLERNGKSCRLRWINYLR 65

Query: 65  PGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK---- 124
           PGLKRG FSQQE+ T+L LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKL K    
Sbjct: 66  PGLKRGMFSQQEQQTILSLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLDKQQQK 125

Query: 125 -PKSPQNNQTISTANSDSNSDHSVDSPK-----CPLPRLFFAEWLAAADADIAAAGTGLS 184
            P     N T S +   S ++ S+ SPK       LP+LFFAEWL    +D   +  G S
Sbjct: 126 QPSYSSTNSTTSDSADSSTTNPSIHSPKPNNNNSQLPKLFFAEWLTVGSSDNCGSEFGPS 185

Query: 185 -------------QRLGSDGGQPTAVI-DS----QDQISTNGLLNYASAGDDVCVQ-LLH 219
                          LGS+  Q   ++ DS    +D  ++NG  NYASAG DVCV+ LLH
Sbjct: 186 TNNLNGQPNFEFGMTLGSELLQNNGILMDSHVKFEDHHTSNGFANYASAG-DVCVEHLLH 245

BLAST of Moc06g38810 vs. ExPASy TrEMBL
Match: A0A0A0LEM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914600 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.1e-68
Identity = 148/244 (60.66%), Postives = 167/244 (68.44%), Query Frame = 0

Query: 5   TASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLR 64
           TASHR K KHRKGLWSP+EDQRLRNYILN+GHGCWSSLP KAGLERNGKSCRLRW+NYLR
Sbjct: 6   TASHRTKSKHRKGLWSPDEDQRLRNYILNYGHGCWSSLPSKAGLERNGKSCRLRWINYLR 65

Query: 65  PGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQKPKSP 124
           PGLKRGTFSQQE+ T+L LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKL K +  
Sbjct: 66  PGLKRGTFSQQEQHTILSLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLDKQQQK 125

Query: 125 Q-----NNQTISTANSDSNSDHSVDSP-----KCPLPRLFFAEWLAAADADIAAAGTGLS 184
           Q      N T S +   S ++ S+ SP        LP+LFFAEWL    +    +  G S
Sbjct: 126 QAYHSSTNSTTSDSADSSTTNPSIHSPIPNNNISQLPKLFFAEWLTVGSSSNGGSEFGPS 185

Query: 185 --------------QRLGSDGGQPTAVI-DS----QDQISTNGLLNYASAGDDVCVQ-LL 219
                           LGS+  Q   +I DS    +D   +NG  NYAS G DVCV+ LL
Sbjct: 186 TTNNLIGQPNFEFGMSLGSELLQNNGIIMDSHVKFEDHHISNGFANYASDG-DVCVEHLL 245

BLAST of Moc06g38810 vs. ExPASy TrEMBL
Match: A0A6J1JY47 (transcription factor LAF1-like OS=Cucurbita maxima OX=3661 GN=LOC111490813 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.7e-68
Identity = 133/227 (58.59%), Postives = 161/227 (70.93%), Query Frame = 0

Query: 1   MGCETASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWM 60
           MG ETASH+ K+KHRKGLWSPEEDQRLRN+ILNHGH CWSS+PLKAGLERNGKSCRLRW+
Sbjct: 1   MGRETASHKAKLKHRKGLWSPEEDQRLRNFILNHGHACWSSVPLKAGLERNGKSCRLRWI 60

Query: 61  NYLRPGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK 120
           NYLRPGLKRGTFSQQE+DT++ LHH+LGN+WSQIAQHLPGRTDNEVKNLWHSYLKKK++K
Sbjct: 61  NYLRPGLKRGTFSQQEQDTIISLHHMLGNRWSQIAQHLPGRTDNEVKNLWHSYLKKKVEK 120

Query: 121 PKSPQNNQTISTANSDSNSDHSVDSPKCPLPRLFFAEWLAAADADIAAAGTGLSQRLGSD 180
            +    + T ST +  ++S  +  S   P P+L FAEWLA A      + + + +  G  
Sbjct: 121 -QGCSAHSTASTTSESADSSITAQSMDSPKPKLLFAEWLAGAGTGFGQSFSSVHEGTGDL 180

Query: 181 GGQPTAVIDSQDQISTNGLL--NYASAGDDVC-------VQLLHFGN 219
            G          +I  NG +  ++    D +C        QLLHFGN
Sbjct: 181 NGTHLEGGGLGSEIQNNGFMMDSHIKFEDQICNGNYDCVDQLLHFGN 226

BLAST of Moc06g38810 vs. ExPASy TrEMBL
Match: A0A6J1H3A8 (transcription factor LAF1-like OS=Cucurbita moschata OX=3662 GN=LOC111459729 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.7e-67
Identity = 134/228 (58.77%), Postives = 162/228 (71.05%), Query Frame = 0

Query: 1   MGCETASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWM 60
           MG ETASH+   KHRKGLWSPEEDQRLRN+ILNHGH CWSS+PLKAGLERNGKSCRLRW+
Sbjct: 1   MGRETASHKANPKHRKGLWSPEEDQRLRNFILNHGHACWSSVPLKAGLERNGKSCRLRWI 60

Query: 61  NYLRPGLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK 120
           NYLRPGLKRGTFSQQE+DT++ LHH+LGNKWSQIAQHLPGRTDNEVKNLWHSYLKK+++K
Sbjct: 61  NYLRPGLKRGTFSQQEQDTIISLHHMLGNKWSQIAQHLPGRTDNEVKNLWHSYLKKRVEK 120

Query: 121 PKSPQNNQTISTANSDSNSDHSVDSPKCPLPRLFFAEWLAAADADIAAA------GTGLS 180
            +    + T ST +  ++S  +  S + P P+L FAEWLA A      +      GTG  
Sbjct: 121 -QGCSAHSTASTTSDSADSSITAQSMESPKPKLLFAEWLAGAGTGFGQSFSSVHEGTGDL 180

Query: 181 QRLGSDGGQPTAVIDSQDQISTNGLLNYASA---GDDVCV-QLLHFGN 219
                +GG   + I + +    +  + +      G+  CV QLLHFGN
Sbjct: 181 NGTHLEGGGLGSEIQNNNGFMMDSHMKFEDQICNGNYDCVDQLLHFGN 227

BLAST of Moc06g38810 vs. TAIR 10
Match: AT4G25560.1 (myb domain protein 18 )

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 93/188 (49.47%), Postives = 125/188 (66.49%), Query Frame = 0

Query: 13  KHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLKRGTF 72
           +HRKGLWSPEED++LR++IL++GH CW+++P+KAGL+RNGKSCRLRW+NYLRPGLKR   
Sbjct: 9   RHRKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMI 68

Query: 73  SQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQKPKSPQNNQTIST 132
           S +EE+T+L  H  LGNKWSQIA+ LPGRTDNE+KN WHS+LKKK  K +S Q+ ++IS 
Sbjct: 69  SAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSLQDAKSISP 128

Query: 133 ANS-------------------------------------DSNSDHSVDSPKCP-LPRLF 163
            +S                                     +SN ++S      P +PRLF
Sbjct: 129 PSSSSSSLVACGKRNPETLISNHVFSFQRLLENKSSSPSQESNGNNSHQCSSAPEIPRLF 188

BLAST of Moc06g38810 vs. TAIR 10
Match: AT5G52260.1 (myb domain protein 19 )

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-48
Identity = 100/242 (41.32%), Postives = 144/242 (59.50%), Query Frame = 0

Query: 6   ASHRGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRP 65
           +  R K + RKGLWSPEEDQ+L+++IL+ GH CW+++P+ AGL+RNGKSCRLRW+NYLRP
Sbjct: 4   SGERPKQRQRKGLWSPEEDQKLKSFILSRGHACWTTVPILAGLQRNGKSCRLRWINYLRP 63

Query: 66  GLKRGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQKPKSPQ 125
           GLKRG+FS++EE+T+L LH  LGNKWS+IA++LPGRTDNE+KN WHSYLKK+  K +   
Sbjct: 64  GLKRGSFSEEEEETILTLHSSLGNKWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKSQPQL 123

Query: 126 NNQTISTANSDSN-----------------------SDHSVDSPKCP------------L 185
            +Q      S S+                       S++   SP               L
Sbjct: 124 KSQISDLTESPSSLLSCGKRNLETETLDHVISFQKFSENPTSSPSKESNNNMIMNNSNNL 183

Query: 186 PRLFFAEWLAAADADIAAAGTGLSQRLGSDGGQPTAVIDSQDQISTNGLL-----NYASA 208
           P+LFF+EW+++++  I  +      +          + ++QDQI+   ++     NY+S 
Sbjct: 184 PKLFFSEWISSSNPHIDYSSAFTDSK---------HINETQDQINEEEVMMINNNNYSSL 236

BLAST of Moc06g38810 vs. TAIR 10
Match: AT3G48920.1 (myb domain protein 45 )

HSP 1 Score: 182.6 bits (462), Expect = 3.8e-46
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = 0

Query: 9   RGKVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLK 68
           + K K RKGLWSPEED++LR+++L +GHGCWS++PL+AGL+RNGKSCRLRW+NYLRPGLK
Sbjct: 13  KSKEKQRKGLWSPEEDEKLRSHVLKYGHGCWSTIPLQAGLQRNGKSCRLRWVNYLRPGLK 72

Query: 69  RGTFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKK--KLQKPKSPQN 128
           +  F++QEE  +L LH +LGNKWSQI++ LPGRTDNE+KN WHS LKK   L++ ++ + 
Sbjct: 73  KSLFTKQEETILLSLHSMLGNKWSQISKFLPGRTDNEIKNYWHSNLKKGVTLKQHETTKK 132

Query: 129 NQTISTANS----DSNSDHSVDS----------PKCPLPRLFFAEWL 160
           +QT    NS     S+++ S  S               P L F+EWL
Sbjct: 133 HQTPLITNSLEALQSSTERSSSSINVGETSNAQTSSFSPNLVFSEWL 179

BLAST of Moc06g38810 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 84/136 (61.76%), Postives = 103/136 (75.74%), Query Frame = 0

Query: 11  KVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLKRG 70
           K K RKGLWSPEED++L  +I NHGHGCWSS+P  AGL+R GKSCRLRW+NYLRP LKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 71  TFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKL-QKPKSPQNNQT 130
            FS +EE+ ++ LH +LGN+WSQIA  LPGRTDNE+KNLW+S +KKKL Q+   P  ++ 
Sbjct: 69  AFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRGIDPNTHKP 128

Query: 131 ISTANSDSNSDHSVDS 146
           IS   S S+ D    S
Sbjct: 129 ISEVESFSDKDKPTTS 144

BLAST of Moc06g38810 vs. TAIR 10
Match: AT1G57560.1 (myb domain protein 50 )

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-44
Identity = 85/141 (60.28%), Postives = 102/141 (72.34%), Query Frame = 0

Query: 11  KVKHRKGLWSPEEDQRLRNYILNHGHGCWSSLPLKAGLERNGKSCRLRWMNYLRPGLKRG 70
           K K RKGLWSPEED++L NYI  HGHGCWSS+P  AGLER GKSCRLRW+NYLRP LKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINYLRPDLKRG 68

Query: 71  TFSQQEEDTVLGLHHILGNKWSQIAQHLPGRTDNEVKNLWHSYLKKKLQK------PKSP 130
            FS +E++ ++ LH +LGN+WSQIA  LPGRTDNE+KNLW+S +KKKL K         P
Sbjct: 69  AFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKGIDPITHKP 128

Query: 131 QNNQTISTANSDSNSDHSVDS 146
            +     T  SD+N+  S  S
Sbjct: 129 LSEVGKETNRSDNNNSTSFSS 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038888761.13.5e-7057.81transcription factor LAF1-like [Benincasa hispida][more]
XP_008465864.14.6e-7061.32PREDICTED: transcription factor LAF1 [Cucumis melo] >KAA0038489.1 transcription ... [more]
XP_004148377.14.3e-6860.66transcription factor LAF1 [Cucumis sativus] >KGN60480.1 hypothetical protein Csa... [more]
XP_022995192.15.6e-6858.59transcription factor LAF1-like [Cucurbita maxima][more]
XP_023534576.11.6e-6758.59transcription factor LAF1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9M0K41.9e-4749.47Transcription factor LAF1 OS=Arabidopsis thaliana OX=3702 GN=LAF1 PE=1 SV=2[more]
P200275.9e-4455.70Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3[more]
Q8VZQ21.7e-4361.76Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1[more]
Q8LPH68.5e-4370.91Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1[more]
Q9C6U13.6e-4158.39Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7TAW62.2e-7061.32Transcription factor LAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3CRA72.2e-7061.32transcription factor LAF1 OS=Cucumis melo OX=3656 GN=LOC103503453 PE=4 SV=1[more]
A0A0A0LEM12.1e-6860.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914600 PE=4 SV=1[more]
A0A6J1JY472.7e-6858.59transcription factor LAF1-like OS=Cucurbita maxima OX=3661 GN=LOC111490813 PE=4 ... [more]
A0A6J1H3A86.7e-6758.77transcription factor LAF1-like OS=Cucurbita moschata OX=3662 GN=LOC111459729 PE=... [more]
Match NameE-valueIdentityDescription
AT4G25560.11.4e-4849.47myb domain protein 18 [more]
AT5G52260.13.1e-4841.32myb domain protein 19 [more]
AT3G48920.13.8e-4653.29myb domain protein 45 [more]
AT1G09540.11.2e-4461.76myb domain protein 61 [more]
AT1G57560.12.1e-4460.28myb domain protein 50 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..237
NoneNo IPR availableGENE3D1.10.10.60coord: 16..68
e-value: 7.2E-17
score: 63.1
NoneNo IPR availableGENE3D1.10.10.60coord: 71..144
e-value: 1.1E-19
score: 72.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..144
NoneNo IPR availablePANTHERPTHR47997MYB DOMAIN PROTEIN 55coord: 1..142
NoneNo IPR availablePANTHERPTHR47997:SF11MYB TRANSCRIPTION FACTORcoord: 1..142
IPR001005SANT/Myb domainSMARTSM00717santcoord: 15..65
e-value: 3.7E-10
score: 49.7
coord: 68..116
e-value: 1.7E-11
score: 54.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 11..63
score: 10.22032
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 64..114
score: 10.162258
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 19..63
e-value: 2.99555E-9
score: 49.4962
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 71..114
e-value: 1.60288E-8
score: 47.5702
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 16..63
e-value: 5.1E-12
score: 45.8
coord: 69..114
e-value: 1.4E-12
score: 47.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 64..118
score: 23.254847
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 11..63
score: 17.571833
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 14..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g38810.1Moc06g38810.1mRNA