Moc06g37780 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g37780
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RING-H2 finger protein ATL2-like
Location	chr6: 29062968 .. 29063495 (-)
RNA-Seq Expression	Moc06g37780
Synteny	Moc06g37780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCCTCTATTTCGCCATTAACGGCCACCGCTGCTCTCAAATCCTCCATTTCTTCACCGGAATCTTCCGTCGATTGAAGCACCTGGGGGTGTATTTGGGTGTGCTGAAGCCGCCGCCGCAGCAACCGGAGGACGCCGACGATCGTGTTGACCGGCCGACGAGTTACGTTTTCGTGACGGAAGGGCTGTGCCCGTCGCTGGTGACGGTTCCGGCGACCGATCTCCAGGCGAGGATCAAGAAGAGCCTTCCGATTGTGGAGTTTGGGGACTTTGCAGCGAAAGGGGAACTGAAATTTTGGGAAGATTGGGAAGAAGAAGAAGAAGAAGAGGAGAAGGGAAGGTGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCAGATTACTTGCCCTATTTGTAGATCCATGCTTTTGCCCGCCGGAGAAGGCGACGGCCTCCGCTATTTCCGTTGA

mRNA sequence

ATGGGTTTCCTCTATTTCGCCATTAACGGCCACCGCTGCTCTCAAATCCTCCATTTCTTCACCGGAATCTTCCGTCGATTGAAGCACCTGGGGGTGTATTTGGGTGTGCTGAAGCCGCCGCCGCAGCAACCGGAGGACGCCGACGATCGTGTTGACCGGCCGACGAGTTACGTTTTCGTGACGGAAGGGCTGTGCCCGTCGCTGGTGACGGTTCCGGCGACCGATCTCCAGGCGAGGATCAAGAAGAGCCTTCCGATTGTGGAGTTTGGGGACTTTGCAGCGAAAGGGGAACTGAAATTTTGGGAAGATTGGGAAGAAGAAGAAGAAGAAGAGGAGAAGGGAAGGTGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCAGATTACTTGCCCTATTTGTAGATCCATGCTTTTGCCCGCCGGAGAAGGCGACGGCCTCCGCTATTTCCGTTGA

Coding sequence (CDS)

ATGGGTTTCCTCTATTTCGCCATTAACGGCCACCGCTGCTCTCAAATCCTCCATTTCTTCACCGGAATCTTCCGTCGATTGAAGCACCTGGGGGTGTATTTGGGTGTGCTGAAGCCGCCGCCGCAGCAACCGGAGGACGCCGACGATCGTGTTGACCGGCCGACGAGTTACGTTTTCGTGACGGAAGGGCTGTGCCCGTCGCTGGTGACGGTTCCGGCGACCGATCTCCAGGCGAGGATCAAGAAGAGCCTTCCGATTGTGGAGTTTGGGGACTTTGCAGCGAAAGGGGAACTGAAATTTTGGGAAGATTGGGAAGAAGAAGAAGAAGAAGAGGAGAAGGGAAGGTGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCAGATTACTTGCCCTATTTGTAGATCCATGCTTTTGCCCGCCGGAGAAGGCGACGGCCTCCGCTATTTCCGTTGA

Protein sequence

MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFVTEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR

Homology

[Close]

BLAST of Moc06g37780 vs. NCBI nr
Match: XP_022159502.1 (RING-H2 finger protein ATL2-like [Momordica charantia])

HSP 1 Score: 372.1 bits (954), Expect = 2.7e-99
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60
           MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV
Sbjct: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60

Query: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120
           TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL
Sbjct: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120

Query: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 176
           SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR
Sbjct: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 175

[Close]

BLAST of Moc06g37780 vs. NCBI nr
Match: XP_038907243.1 (RING-H2 finger protein ATL2-like [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 5.6e-57
Identity = 113/175 (64.57%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60
           MGFLYF+IN H CSQILHFFT I  +LK L  +  +LK  P+   +AD   DRPTS+VF+
Sbjct: 1   MGFLYFSINAHLCSQILHFFTTILLQLKLLAAHFRLLKLSPE--HNADSPFDRPTSFVFL 60

Query: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120
           TEG C SLVTVPA DLQ RIKKSLPIV F DF AK  ++F E+    EE+EE   CT+CL
Sbjct: 61  TEGPCSSLVTVPAADLQGRIKKSLPIVAFRDFIAKQGMEFGEN----EEDEENRICTVCL 120

Query: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 176
            +ME+SE MREL NCCHVFH+EC D WIDEFQITCP+CRS+LLPAGEG G R+F+
Sbjct: 121 CEMERSESMRELPNCCHVFHRECFDAWIDEFQITCPVCRSLLLPAGEGGGFRFFQ 169

[Close]

BLAST of Moc06g37780 vs. NCBI nr
Match: XP_023520502.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo] >KAG7017057.1 RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.4 bits (581), Expect = 4.7e-56
Identity = 114/175 (65.14%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60
           MGF  FAINGHRC QILHFFT I   LK L    G+LKP P+    AD     PTSY+F+
Sbjct: 1   MGFFCFAINGHRCYQILHFFTRILLHLKLLAARFGLLKPSPE--HHADSPFQPPTSYLFL 60

Query: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120
           T+  CPSLVTVPA DLQARIK SLPIVEFGDFAAK  ++F  +    + EEE   CTICL
Sbjct: 61  TDDPCPSLVTVPAADLQARIKNSLPIVEFGDFAAKQGIEFGGN----DGEEENRMCTICL 120

Query: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 176
           S+ME+SE MREL NC HVFH+ECLDTWIDEFQITCP+CRS LLP+G+G G R+ R
Sbjct: 121 SEMERSEPMRELCNCRHVFHRECLDTWIDEFQITCPVCRSFLLPSGDGGGFRFLR 169

[Close]

BLAST of Moc06g37780 vs. NCBI nr
Match: XP_022996076.1 (RING-H2 finger protein ATL46-like [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 1.5e-49
Identity = 105/176 (59.66%), Postives = 125/176 (71.02%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILH-FFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVF 60
           MGFL+FAIN    SQILH  FT I  + K L  + G++KP P+    AD   +RPTSYV 
Sbjct: 1   MGFLHFAINAQTSSQILHQAFTRILLQFKLLAAHFGLIKPSPELV--ADSPFERPTSYVL 60

Query: 61  VTEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTIC 120
           +TEG  PSLVTVPA DLQ RIK SLPI+E+GDF  K          E + +EE  +CTIC
Sbjct: 61  LTEGRYPSLVTVPAVDLQVRIKTSLPIIEYGDFVEKQ----GRGSPENKVDEENRKCTIC 120

Query: 121 LSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 176
           L +ME+SE MREL NCCHVFH++CLDTWIDEF+ITCP+CRSML PAGEGDG  + R
Sbjct: 121 LCEMERSETMRELCNCCHVFHRDCLDTWIDEFRITCPVCRSMLFPAGEGDGFPFVR 170

[Close]

BLAST of Moc06g37780 vs. NCBI nr
Match: XP_023533023.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.6 bits (501), Expect = 9.0e-47
Identity = 99/160 (61.88%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60
           MGFL+FAING R SQILH FT I  + K L  + G++KP P+    A+   +RPTSYV +
Sbjct: 1   MGFLHFAINGQRSSQILHLFTRILLQFKLLAAHFGLIKPSPEHV--AESPFERPTSYVLL 60

Query: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120
           TEG  PSLVTVPA DLQARIK SLPI+E+GDF  K          EE+ +EE  +CTICL
Sbjct: 61  TEGRYPSLVTVPAVDLQARIKTSLPIIEYGDFVEKQ----GRGSPEEKVDEENRKCTICL 120

Query: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRS 161
            +ME+SE MRELSNCCHVFH +CLDTWIDEF+ITCP+CRS
Sbjct: 121 CEMERSETMRELSNCCHVFHPDCLDTWIDEFRITCPVCRS 154

[Close]

BLAST of Moc06g37780 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 80  IKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICLSKMEKSEKMRELSNCCHVF 139
           I++ LP+++F +    G     ED  E         C +CL + E  +++R L NC H+F
Sbjct: 71  IREILPVIKFEELTNSG-----EDLPE--------NCAVCLYEFEGEQEIRWLRNCRHIF 130

Query: 140 HKECLDTWIDEFQITCPICRSMLLP 165
           H+ CLD W+D  Q TCP+CR+  +P
Sbjct: 131 HRSCLDRWMDHDQKTCPLCRTPFVP 142

[Close]

BLAST of Moc06g37780 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-10
Identity = 25/48 (52.08%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 116 CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL 164
           C +CLSK+++ E++R+L  C HVFHK+CL+ W+ +F  TCP+CRS L+
Sbjct: 86  CVVCLSKLKEGEEVRKL-ECRHVFHKKCLEGWLHQFNFTCPLCRSALV 132

[Close]

BLAST of Moc06g37780 vs. ExPASy Swiss-Prot
Match: Q9SUS5 (E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 116 CTICLSKMEKSEKMRELSNCCHVFHKECLDTWI-DEFQITCPICRSMLLP 165
           CT+CLS     +K+R+L  C HVFH  CLD WI D  +ITCPICR+  LP
Sbjct: 85  CTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLP 134

[Close]

BLAST of Moc06g37780 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 116 CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLP 165
           C +CLSK++  E++R+L +C HVFHK+CL+ W+      CP+CRS LLP
Sbjct: 74  CIVCLSKLKTGEEVRKL-DCRHVFHKQCLEGWLQHLNFNCPLCRSPLLP 121

[Close]

BLAST of Moc06g37780 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 116 CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGD 170
           C +CL + E  E +R +  CCHVFH +C+D W+ E   TCP+CR+ L+   +GD
Sbjct: 135 CAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS-TCPLCRADLVLNQQGD 187

[Close]

BLAST of Moc06g37780 vs. ExPASy TrEMBL
Match: A0A6J1E009 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111025900 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.3e-99
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60
           MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV
Sbjct: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFV 60

Query: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120
           TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL
Sbjct: 61  TEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICL 120

Query: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 176
           SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR
Sbjct: 121 SKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 175

[Close]

BLAST of Moc06g37780 vs. ExPASy TrEMBL
Match: A0A6J1K3P6 (RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111491392 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.2e-50
Identity = 105/176 (59.66%), Postives = 125/176 (71.02%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILH-FFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVF 60
           MGFL+FAIN    SQILH  FT I  + K L  + G++KP P+    AD   +RPTSYV 
Sbjct: 1   MGFLHFAINAQTSSQILHQAFTRILLQFKLLAAHFGLIKPSPELV--ADSPFERPTSYVL 60

Query: 61  VTEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTIC 120
           +TEG  PSLVTVPA DLQ RIK SLPI+E+GDF  K          E + +EE  +CTIC
Sbjct: 61  LTEGRYPSLVTVPAVDLQVRIKTSLPIIEYGDFVEKQ----GRGSPENKVDEENRKCTIC 120

Query: 121 LSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLPAGEGDGLRYFR 176
           L +ME+SE MREL NCCHVFH++CLDTWIDEF+ITCP+CRSML PAGEGDG  + R
Sbjct: 121 LCEMERSETMRELCNCCHVFHRDCLDTWIDEFRITCPVCRSMLFPAGEGDGFPFVR 170

[Close]

BLAST of Moc06g37780 vs. ExPASy TrEMBL
Match: A0A6I9TKD6 (RING-H2 finger protein ATL80-like OS=Sesamum indicum OX=4182 GN=LOC105164404 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-27
Identity = 73/167 (43.71%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGV----YLGVLKPPPQQPEDADDRVDRPTS 60
           MGFLY AI   R   I+ FF  IF   + L +     LG+ KPPP++  ++ D  +   +
Sbjct: 1   MGFLYLAIRIPRAISIITFFANIFTHARFLFIGTLAQLGLYKPPPEEEPNSRDNSE---N 60

Query: 61  YVFVTEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRC 120
           Y+ + +G  PSLV +P   + A IKK +P V+F DF  +          EEEE  E   C
Sbjct: 61  YILILDGSSPSLVPIPVNVVTAAIKKRVPRVQFQDFIRR------RQGGEEEELSELIVC 120

Query: 121 TICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL 164
           +ICL  +E  +++REL NC HVFH  CLDTW+DE Q+TCP+CRSMLL
Sbjct: 121 SICLECIEWCDEIRELCNCSHVFHSGCLDTWLDEGQVTCPLCRSMLL 158

[Close]

BLAST of Moc06g37780 vs. ExPASy TrEMBL
Match: A0A2G9G363 (RING-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27874 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.0e-27
Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 1   MGFLYFAINGHRCSQILHFFTGIFRRLKHLGV----YLGVLKPPPQQPEDADDRVDRPTS 60
           MGFLY+AI   +   I  FF  IF   +   +    +LG+ KPPP+  E+++ R D   +
Sbjct: 1   MGFLYYAIKIPKAITIT-FFLNIFTNARFFFIGALTHLGLYKPPPE--EESNSR-DNSNN 60

Query: 61  YVFVTEGLCPSLVTVPATDLQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGR- 120
           Y+ + +G  PSLV VP   +   IK  +PI+++ DF  + +       EEE EE   G  
Sbjct: 61  YILILDGSSPSLVPVPVQVVTTAIKNRVPIIQYHDFLLRHK-------EEEGEEGLCGEK 120

Query: 121 -CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLP 165
            C+ICL  +E   ++REL NC H+FH+ECLDTWIDE Q+TCP+CRSMLLP
Sbjct: 121 VCSICLECIEMKHEIRELCNCSHLFHRECLDTWIDEGQVTCPLCRSMLLP 159

[Close]

BLAST of Moc06g37780 vs. ExPASy TrEMBL
Match: A0A6J1AZI3 (E3 ubiquitin-protein ligase RHA2B-like OS=Herrania umbratica OX=108875 GN=LOC110422628 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 9.4e-26
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 16  ILHFFTGIFRRLKHLGVYLGVLKPPPQQPEDADDRVDRPTSYVFVTEGLCPSLVTVPATD 75
           ++++F  +F   K    +LG+LKPPP+  ED         +YV V +G   SLV VP   
Sbjct: 16  LVNYFKFLF---KEAFTHLGLLKPPPELEEDYYS-ATCCNAYVLVMDGRSRSLVPVPIQV 75

Query: 76  LQARIKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICLSKMEKSEKMRELSNC 135
           + A IKKSLP++E+G F         E + ++++ E    CT+CL  MEKSE++R L  C
Sbjct: 76  VTAMIKKSLPVLEYGTFI--------ERFGDDKQVENNTICTVCLDSMEKSEEIRALCKC 135

Query: 136 CHVFHKECLDTWIDEFQITCPICRSMLLP 165
           CHVFHKECLDTW++E Q+TCP+CRS L P
Sbjct: 136 CHVFHKECLDTWVNEGQVTCPLCRSTLYP 152

[Close]

BLAST of Moc06g37780 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 80  IKKSLPIVEFGDFAAKGELKFWEDWEEEEEEEEKGRCTICLSKMEKSEKMRELSNCCHVF 139
           I++ LP+++F +    G     ED  E         C +CL + E  +++R L NC H+F
Sbjct: 71  IREILPVIKFEELTNSG-----EDLPE--------NCAVCLYEFEGEQEIRWLRNCRHIF 130

Query: 140 HKECLDTWIDEFQITCPICRSMLLP 165
           H+ CLD W+D  Q TCP+CR+  +P
Sbjct: 131 HRSCLDRWMDHDQKTCPLCRTPFVP 142

[Close]

BLAST of Moc06g37780 vs. TAIR 10
Match: AT1G15100.1 (RING-H2 finger A2A )

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 25/48 (52.08%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 116 CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL 164
           C +CLSK+++ E++R+L  C HVFHK+CL+ W+ +F  TCP+CRS L+
Sbjct: 86  CVVCLSKLKEGEEVRKL-ECRHVFHKKCLEGWLHQFNFTCPLCRSALV 132

[Close]

BLAST of Moc06g37780 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 6.5e-11
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 107 EEEEEEKG-RCTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSML 163
           EEEEEEKG  C +CL   ++ E++ EL +C H FH+ CLD W      TCP+CRS+L
Sbjct: 57  EEEEEEKGVECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSIL 113

[Close]

BLAST of Moc06g37780 vs. TAIR 10
Match: AT3G43430.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 8.5e-11
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 116 CTICLSKMEKSEKMRELSNCCHVFHKECLDTWI--------DEFQITCPICRSMLLPA 166
           C +CL  +E  +++REL NC HVFH++C+D W+        D+   TCP+CR+ LLP+
Sbjct: 83  CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPLLPS 140

[Close]

BLAST of Moc06g37780 vs. TAIR 10
Match: AT2G01150.1 (RING-H2 finger protein 2B )

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 116 CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLLP 165
           C +CLSK++  E++R+L +C HVFHK+CL+ W+      CP+CRS LLP
Sbjct: 74  CIVCLSKLKTGEEVRKL-DCRHVFHKQCLEGWLQHLNFNCPLCRSPLLP 121

The following BLAST results are available for this feature:

BLAST of Moc06g37780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159502.1	2.7e-99	100.00	RING-H2 finger protein ATL2-like [Momordica charantia]	[more]
XP_038907243.1	5.6e-57	64.57	RING-H2 finger protein ATL2-like [Benincasa hispida]	[more]
XP_023520502.1	4.7e-56	65.14	RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo] >KAG7017057.1 RING...	[more]
XP_022996076.1	1.5e-49	59.66	RING-H2 finger protein ATL46-like [Cucurbita maxima]	[more]
XP_023533023.1	9.0e-47	61.88	RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc06g37780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF92	1.4e-10	36.47	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q9ZT50	5.3e-10	52.08	E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ...	[more]
Q9SUS5	1.6e-09	56.00	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 ...	[more]
Q9ZU51	1.6e-09	51.02	E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ...	[more]
O64763	3.5e-09	44.44	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]

BLAST of Moc06g37780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E009	1.3e-99	100.00	RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111025900 ...	[more]
A0A6J1K3P6	7.2e-50	59.66	RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111491392 PE...	[more]
A0A6I9TKD6	1.0e-27	43.71	RING-H2 finger protein ATL80-like OS=Sesamum indicum OX=4182 GN=LOC105164404 PE=...	[more]
A0A2G9G363	5.0e-27	43.53	RING-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=C...	[more]
A0A6J1AZI3	9.4e-26	44.97	E3 ubiquitin-protein ligase RHA2B-like OS=Herrania umbratica OX=108875 GN=LOC110...	[more]

BLAST of Moc06g37780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61460.1	1.0e-11	36.47	brassinosteroid-responsive RING-H2	[more]
AT1G15100.1	3.8e-11	52.08	RING-H2 finger A2A	[more]
AT1G24580.1	6.5e-11	50.88	RING/U-box superfamily protein	[more]
AT3G43430.1	8.5e-11	43.10	RING/U-box superfamily protein	[more]
AT2G01150.1	1.1e-10	51.02	RING-H2 finger protein 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 116..158 e-value: 5.0E-5 score: 32.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 115..159 e-value: 5.7E-12 score: 45.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 116..159 score: 12.592549
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 80..164 e-value: 1.8E-17 score: 64.8
None	No IPR available	PANTHER	PTHR45969:SF35	RING-H2 ZINC FINGER PROTEIN RHA4A-LIKE	coord: 18..164
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 18..164
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g37780.1	Moc06g37780.1	mRNA