Moc06g37750 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g37750
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionAvr9/Cf-9 rapidly elicited protein
Locationchr6: 29029646 .. 29029891 (-)
RNA-Seq ExpressionMoc06g37750
SyntenyMoc06g37750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCGATGTTCAGTTTTCTGGATGCCTTCGCCGCCGAGTTATTGATGGGCAAAACATCTATTAGGGCTTCTTCCTTCGCTCCAAAGAGTGGTAGCGGTGGCTCCGTGAAGTCTCCGCCGAGCAACGTGGCGCCGGACAACCTGGAAGAGCCCAAATCCAACAAGAATTCGCTCCTCCGGCCGCCGAGGTTGGCGCCGGAGTTCGACGGCCTCAATTGCTTCGAGACTCTCGTCTCCTATTGA

mRNA sequence

ATGAATTCGATGTTCAGTTTTCTGGATGCCTTCGCCGCCGAGTTATTGATGGGCAAAACATCTATTAGGGCTTCTTCCTTCGCTCCAAAGAGTGGTAGCGGTGGCTCCGTGAAGTCTCCGCCGAGCAACGTGGCGCCGGACAACCTGGAAGAGCCCAAATCCAACAAGAATTCGCTCCTCCGGCCGCCGAGGTTGGCGCCGGAGTTCGACGGCCTCAATTGCTTCGAGACTCTCGTCTCCTATTGA

Coding sequence (CDS)

ATGAATTCGATGTTCAGTTTTCTGGATGCCTTCGCCGCCGAGTTATTGATGGGCAAAACATCTATTAGGGCTTCTTCCTTCGCTCCAAAGAGTGGTAGCGGTGGCTCCGTGAAGTCTCCGCCGAGCAACGTGGCGCCGGACAACCTGGAAGAGCCCAAATCCAACAAGAATTCGCTCCTCCGGCCGCCGAGGTTGGCGCCGGAGTTCGACGGCCTCAATTGCTTCGAGACTCTCGTCTCCTATTGA

Protein sequence

MNSMFSFLDAFAAELLMGKTSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKSNKNSLLRPPRLAPEFDGLNCFETLVSY
Homology
BLAST of Moc06g37750 vs. NCBI nr
Match: XP_022159727.1 (uncharacterized protein LOC111026066 [Momordica charantia])

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29
Identity = 70/81 (86.42%), Postives = 73/81 (90.12%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGKTSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKSNKNSLL 60
          MNSMFS  DAFAAELLM KT   +SSFAP +GSGGSVKSPPSN APDNLE+PKSNKNSLL
Sbjct: 1  MNSMFSLFDAFAAELLMAKTFRASSSFAPNNGSGGSVKSPPSNAAPDNLEQPKSNKNSLL 60

Query: 61 RPPRLAPEFDGLNCFETLVSY 82
          RPPRLAPEFDGLNCFETLVSY
Sbjct: 61 RPPRLAPEFDGLNCFETLVSY 81

BLAST of Moc06g37750 vs. NCBI nr
Match: KAG6579594.1 (hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 77.4 bits (189), Expect = 6.3e-11
Identity = 47/85 (55.29%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 1   MNSMFSFLDAFAAELLMGK---TSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKS--- 60
           MNSMFSF DAFAAE+L+GK    S    SF P +G GGS  S P    P   EE  +   
Sbjct: 81  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVAK 140

Query: 61  NKNSLLRPPRLAPEFDGLNCFETLV 80
           +KNSL++ PR A E DGLNCFETLV
Sbjct: 141 SKNSLMK-PRFALELDGLNCFETLV 164

BLAST of Moc06g37750 vs. NCBI nr
Match: XP_022929066.1 (uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothetical protein SDJN02_22166, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.4 bits (189), Expect = 6.3e-11
Identity = 47/85 (55.29%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGK---TSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKS--- 60
          MNSMFSF DAFAAE+L+GK    S    SF P +G GGS  S P    P   EE  +   
Sbjct: 1  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVAK 60

Query: 61 NKNSLLRPPRLAPEFDGLNCFETLV 80
          +KNSL++ PR A E DGLNCFETLV
Sbjct: 61 SKNSLMK-PRFALELDGLNCFETLV 84

BLAST of Moc06g37750 vs. NCBI nr
Match: XP_023522684.1 (uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 73.6 bits (179), Expect = 9.1e-10
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGK---TSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKS--- 60
          MNSMFSF DAFAAE+L+GK    S    SF P +G GGS  S P    P   +E  +   
Sbjct: 1  MNSMFSFFDAFAAEILIGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKDEANAVAK 60

Query: 61 NKNSLLRPPRLAPEFDGLNCFETLV 80
          +KNS ++ PR A E DGLNCFETLV
Sbjct: 61 SKNSSMK-PRFALELDGLNCFETLV 84

BLAST of Moc06g37750 vs. NCBI nr
Match: KAA0042638.1 (uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK06039.1 uncharacterized protein E5676_scaffold376G001400 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGKTSIRAS----SFAPKSGSGGSVKSPPSNVAPDNLEEPKSNK 60
          MNSMFS  DAFAAE L+G   +RAS    SF P + +  +  S      P   +E    K
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSLLRPPRLAPEFDGLNCFETLV 80
          NS ++ PR A E DGLNCFETLV
Sbjct: 61 NSSVK-PRFALELDGLNCFETLV 82

BLAST of Moc06g37750 vs. ExPASy TrEMBL
Match: A0A6J1E0L6 (uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026066 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.5e-30
Identity = 70/81 (86.42%), Postives = 73/81 (90.12%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGKTSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKSNKNSLL 60
          MNSMFS  DAFAAELLM KT   +SSFAP +GSGGSVKSPPSN APDNLE+PKSNKNSLL
Sbjct: 1  MNSMFSLFDAFAAELLMAKTFRASSSFAPNNGSGGSVKSPPSNAAPDNLEQPKSNKNSLL 60

Query: 61 RPPRLAPEFDGLNCFETLVSY 82
          RPPRLAPEFDGLNCFETLVSY
Sbjct: 61 RPPRLAPEFDGLNCFETLVSY 81

BLAST of Moc06g37750 vs. ExPASy TrEMBL
Match: A0A6J1EM23 (uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC111435766 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11
Identity = 47/85 (55.29%), Postives = 54/85 (63.53%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGK---TSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKS--- 60
          MNSMFSF DAFAAE+L+GK    S    SF P +G GGS  S P    P   EE  +   
Sbjct: 1  MNSMFSFFDAFAAEILLGKFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVAK 60

Query: 61 NKNSLLRPPRLAPEFDGLNCFETLV 80
          +KNSL++ PR A E DGLNCFETLV
Sbjct: 61 SKNSLMK-PRFALELDGLNCFETLV 84

BLAST of Moc06g37750 vs. ExPASy TrEMBL
Match: A0A5D3C6N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001400 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.1e-08
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGKTSIRAS----SFAPKSGSGGSVKSPPSNVAPDNLEEPKSNK 60
          MNSMFS  DAFAAE L+G   +RAS    SF P + +  +  S      P   +E    K
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSLLRPPRLAPEFDGLNCFETLV 80
          NS ++ PR A E DGLNCFETLV
Sbjct: 61 NSSVK-PRFALELDGLNCFETLV 82

BLAST of Moc06g37750 vs. ExPASy TrEMBL
Match: A0A0A0KJT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 45/81 (55.56%), Postives = 51/81 (62.96%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGKTSIRASSFAPKSGSGGSVKSP--PSNVAPDNLEEPKSNKNS 60
          MNSMFS  DAFAAE L+G   +RASS  P      +  SP  P  +     EEPKS KNS
Sbjct: 1  MNSMFSLFDAFAAEFLLG-NFVRASSSVPSFTPNNNNASPAVPKPLPSKKEEEPKS-KNS 60

Query: 61 LLRPPRLAPEFDGLNCFETLV 80
          L++ PR A E DGLNCFETLV
Sbjct: 61 LMK-PRFALELDGLNCFETLV 78

BLAST of Moc06g37750 vs. ExPASy TrEMBL
Match: A0A7J6FY87 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020196 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.6e-06
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMG---KTSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKSNKN 60
          MNS+FS  D F AE+++G   KTS  AS F+P +     V +       D    P +N  
Sbjct: 1  MNSLFSCFDVFCAEVMLGKTLKTSSFASPFSPVNNKALDVDNKVFICEQDRKSLPAANDQ 60

Query: 61 SLLRPPRLAPEFDGLNCFETLVSY 82
             +  R APEFDGLNCFET VSY
Sbjct: 61 GKKKVIRSAPEFDGLNCFETFVSY 84

BLAST of Moc06g37750 vs. TAIR 10
Match: AT1G32928.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 4.2e-05
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGKTSIRASSFAPKS-----GSGGSVKSPPSNVAPDNLEEPKSN 60
          MNSMFS  DA  AE +MGK  + A+S+  +S      S  SV    ++++    E+   N
Sbjct: 1  MNSMFSAFDAMCAE-IMGK-KVTAASYVYRSERNSASSSSSVGGQNASLSLKKDEKASKN 60

Query: 61 KNSLLRPPRLAPEFDGLNCFETLV 80
           +   + PR A E DGL+CFET+V
Sbjct: 61 MDLPTKTPRFALELDGLHCFETIV 82

BLAST of Moc06g37750 vs. TAIR 10
Match: AT1G32920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 9.3e-05
Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 1  MNSMFSFLDAFAAELLMGKTSIRASSFAPKSGSGGSVKSPPSNVAPDNLEEPKSNKNS-- 60
          MNSMFS  DA  AE +MGK ++ ASSF   + +     + P+  AP    + K+N +S  
Sbjct: 1  MNSMFSAFDALFAE-VMGK-NLMASSFTATTAT-----TKPA-AAPQTQTQEKANASSKK 60

Query: 61 ---LLRPPRLAPEFDGLNCFETLV 80
             + + PR A E DGL+CFET+V
Sbjct: 61 IGLVQKIPRFALELDGLHCFETIV 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159727.11.8e-2986.42uncharacterized protein LOC111026066 [Momordica charantia][more]
KAG6579594.16.3e-1155.29hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022929066.16.3e-1155.29uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothet... [more]
XP_023522684.19.1e-1052.94uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo][more]
KAA0042638.11.9e-0748.19uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK0... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1E0L68.5e-3086.42uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
A0A6J1EM233.0e-1155.29uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC1114357... [more]
A0A5D3C6N39.1e-0848.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KJT81.2e-0755.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1[more]
A0A7J6FY878.6e-0644.05Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020196 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G32928.14.2e-0539.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G32920.19.3e-0541.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..55
NoneNo IPR availablePANTHERPTHR33641OS06G0133500 PROTEINcoord: 1..81
NoneNo IPR availablePANTHERPTHR33641:SF2BNAA08G06880D PROTEINcoord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g37750.1Moc06g37750.1mRNA