Moc06g36680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g36680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Spc97 / Spc98 family of spindle pole body (SBP) component
Location	chr6: 28175274 .. 28177154 (-)
RNA-Seq Expression	Moc06g36680
Synteny	Moc06g36680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGTAAGTTCATGTGGAACTATGCTTACTCTTTTTAACTGCCGAGCACTCTTATTTCTCACTACGATTACGATTGCATTACTCATTGACTAATTGTATACTTAGCTTTGCTTACAAAAATTGAGCATTCTTCATGTGCCAGTCAATTAGATATGCTGATTCCTATTTCTGTCAAATTTTTTTTCTATGAATTTTGTTGGAAACTATTAATATCTTCTTATTGAATTTGAATTGATACGCTGATTTTCATGGGCTTTCTTGTCTCAGATATTGATATATGGGATGGAAATCTTCTACTGCCGTTCTTAGGTTATGTTTGCTAACTCTGAATTATAATGTACATCGCAGGACATGCTAATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGTATTTTTGCTTTCTATATGTTGAATTTCTTCTGTTTATATTACCTTGCTATCATATCTTTGTTTAGAATGTCAATTTGAACTCTCTATCTCTCTGTGTGTCTAGCATGCATTATCGTGCCGTCACTGTGTTGCTTTATTTGTATAGAATGAATATTGAAATTTCTGGCGTGCTGTATGTATGTAGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTAGGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTTTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTAAAAACTACAAGTGGCTGTTGTTGTATTGTGACCTTATTCTTGGAAAAATAGCGAAATCCTCATATTGTTGTTACCTTGTTATCTTGTTGCTTCTTTTTTATTGAAAAATAAACTTCTGTTGGGCAACTACATTAACCTTGTGGTTTTCTTAGAGCCTATAATTCGTATAAATTTTCATGAAAGCACTAATGCATTTGATGAAAATTAATTAGATGACGTTTGTTCTTAATAACTTGAACACCAGAATGGGAGGAAGTTCTTATGTGTTCTCCTTTCTCGCAGAAAGGGAGTTTCCTTTGGCAGGCAGGGTTCTTTGGGATTATGTGGGGGATTTGGTTGGAAAGAAACAATAGAATATTTAAGGGTGGAAAGAGAGTGGGAGTCTGTTTGGGATCTCATTTTAATGTTTCTTTATGGGGTTTGTTTCGAAGTTATTTTGTAATTATCAGTTAGGTCATATTCTTTTGGATTGGAAGTCCTTTCTCTAATCCGACTTCCTTCTTCAGGCTATGTTTTTGTATGCCCTTTTGTGTCTTTCTTGTTTTCATTTTAATCAATGAAAAGTTCAGTTTCTTATAAAAAAAAAACTTGAACACCAGAATGGATGTTCAACTTATTAATCTTTCATTCTTTAGTAAAGCTGATTTCTTTTCATTCCAAGTTCCAGAATTTCAGCCCTAGACAGGAAGTTGGACAGAAGAACTTTCTAACCGTCGACCTTTTTTTTCTCTTGGTGCCTTGAGCGATTGGGTTCATTCAATGCTATCAGTCAAATTCTTTGCTTTAATGCTGAGTTTTTTGGAAGATGTATGTGTTTAGTACCATATTATTGTTCTTTTAGATAGGATCCATTTCCCAATTTGTATTGCCAACTTTTGAACTCATTATATCTCTCTCAGCTTTTTTTACCATCTCCCTCTCCTTCCTATTTCTAGGCCGCGACAAAAGGCTGATTCCAGACAGAAGAACGAGAAGTTGTGA

mRNA sequence

ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGACATGCTAATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTAGGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTTTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGCCGCGACAAAAGGCTGATTCCAGACAGAAGAACGAGAAGTTGTGA

Coding sequence (CDS)

ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGACATGCTAATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTAGGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTTTGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGCCGCGACAAAAGGCTGATTCCAGACAGAAGAACGAGAAGTTGTGA

Protein sequence

MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGKRPRQKADSRQKNEKL

Homology

[Close]

BLAST of Moc06g36680 vs. NCBI nr
Match: XP_022156102.1 (uncharacterized protein LOC111023068 [Momordica charantia])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK
Sbjct: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120

Query: 121 RPRQKADSRQKNEKL 136
           RPRQKADSRQKNEKL
Sbjct: 121 RPRQKADSRQKNEKL 135

[Close]

BLAST of Moc06g36680 vs. NCBI nr
Match: XP_038902583.1 (uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902584.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902585.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902586.1 uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902588.1 uncharacterized protein LOC120089238 [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 5.3e-55
Identity = 118/136 (86.76%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEI K NRIED+SWLCSLSESELDMLISIKMLVLQRAK+IGHE LA+KFDLKT+RA
Sbjct: 1   MEEAKEISKSNRIEDISWLCSLSESELDMLISIKMLVLQRAKVIGHEDLAKKFDLKTIRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           IGF LMEHLKG+L+ASDVPD SQSAALNGCNLLD +LEKILSIDEIMAS+CSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELKASDVPDLSQSAALNGCNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRQKADSRQK-NEKL 136
           RPR+K DSRQK N+KL
Sbjct: 121 RPREKVDSRQKTNDKL 136

[Close]

BLAST of Moc06g36680 vs. NCBI nr
Match: XP_023533769.1 (uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51
Identity = 113/133 (84.96%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           IGF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEKILSID+IMAS+CS+RRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RPRQKADSRQKNE 134
           R R KADSR K +
Sbjct: 121 RSRPKADSRPKKK 133

[Close]

BLAST of Moc06g36680 vs. NCBI nr
Match: KAG6606306.1 (hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 211.5 bits (537), Expect = 4.6e-51
Identity = 111/133 (83.46%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           +GF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEK+LSID+IMAS+CS+RRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERRKKPGK 120

Query: 121 RPRQKADSRQKNE 134
           R R KADSR K +
Sbjct: 121 RSRPKADSRPKKK 133

[Close]

BLAST of Moc06g36680 vs. NCBI nr
Match: XP_022995750.1 (uncharacterized protein LOC111491189 [Cucurbita maxima] >XP_022995751.1 uncharacterized protein LOC111491189 [Cucurbita maxima])

HSP 1 Score: 211.1 bits (536), Expect = 6.1e-51
Identity = 111/133 (83.46%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           +GF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEKILSID+IMAS+CS+RRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RPRQKADSRQKNE 134
           R R KADSR + +
Sbjct: 121 RSRPKADSRPRKK 133

[Close]

BLAST of Moc06g36680 vs. ExPASy TrEMBL
Match: A0A6J1DR49 (uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023068 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.9e-65
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK
Sbjct: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120

Query: 121 RPRQKADSRQKNEKL 136
           RPRQKADSRQKNEKL
Sbjct: 121 RPRQKADSRQKNEKL 135

[Close]

BLAST of Moc06g36680 vs. ExPASy TrEMBL
Match: A0A6J1K2S6 (uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.9e-51
Identity = 111/133 (83.46%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           +GF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEKILSID+IMAS+CS+RRKKPGK
Sbjct: 61  LGFILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERRKKPGK 120

Query: 121 RPRQKADSRQKNE 134
           R R KADSR + +
Sbjct: 121 RSRPKADSRPRKK 133

[Close]

BLAST of Moc06g36680 vs. ExPASy TrEMBL
Match: A0A6J1ESQ9 (uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC111437414 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.0e-51
Identity = 111/133 (83.46%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           IGF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEK+LSID+IMAS+C +RRKKPGK
Sbjct: 61  IGFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERRKKPGK 120

Query: 121 RPRQKADSRQKNE 134
           R R KADSR K +
Sbjct: 121 RSRPKADSRPKKK 133

[Close]

BLAST of Moc06g36680 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 9.4e-50
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEA EILK+NR+ED+SWLCSLSESELD+LISIKMLVLQRAK IGHE LAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           IGF LMEHLKG+LR SDV D SQSA LN CNLLD ++EKILSIDEIMAS+CSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRQ 125
           RPR+
Sbjct: 121 RPRK 124

[Close]

BLAST of Moc06g36680 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48
Identity = 103/124 (83.06%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEEA EILK+NR+ED+SWLCSLSESELD+LISIKMLVLQRAK IGHE LAEKFDLKTLRA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  IGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKKPGK 120
           IGF LMEHLKG+LR SDV D SQSA LN CNLLD ++EKILSIDEIMAS+CSDRRKKPGK
Sbjct: 120 IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 179

Query: 121 RPRQ 125
           R ++
Sbjct: 180 RGKK 183

[Close]

BLAST of Moc06g36680 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 59/127 (46.46%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD+LIS+K L +QRAK+ GH+ LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKK 120
           +G  LMEH + +++   S  P    Q   L+ CNLL   ++  + I+EI+  +C ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRPRQ 125
             ++ R+
Sbjct: 121 KARKRRR 127

[Close]

BLAST of Moc06g36680 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 59/127 (46.46%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD+LIS+K L +QRAK+ GH+ LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKK 120
           +G  LMEH + +++   S  P    Q   L+ CNLL   ++  + I+EI+  +C ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRPRQ 125
             ++ R+
Sbjct: 121 KARKRRR 127

[Close]

BLAST of Moc06g36680 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 59/127 (46.46%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD+LIS+K L +QRAK+ GH+ LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRRKK 120
           +G  LMEH + +++   S  P    Q   L+ CNLL   ++  + I+EI+  +C ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRPRQ 125
             ++ R+
Sbjct: 121 KARKRRR 127

[Close]

BLAST of Moc06g36680 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 60/128 (46.88%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEAL-AEKFDLKTLR 60
           MEE  +ILK+NR +D++W CSLSESELD+LIS+K LV++RAK+ G E L A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFALMEHLKGQLR--ASDVPDQSQS-AALNGCNLLDCSLEKILSIDEIMASVCSDR-R 120
           ++G  LME+++ ++    S  P   Q  + L+ CNLL   ++  + I+EI+  +C+ + +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKKSK 120

Query: 121 KKPGKRPR 124
           KK  KR R
Sbjct: 121 KKTRKRSR 128

[Close]

BLAST of Moc06g36680 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 60/128 (46.88%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEAL-AEKFDLKTLR 60
           MEE  +ILK+NR +D++W CSLSESELD+LIS+K LV++RAK+ G E L A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFALMEHLKGQLR--ASDVPDQSQS-AALNGCNLLDCSLEKILSIDEIMASVCSDR-R 120
           ++G  LME+++ ++    S  P   Q  + L+ CNLL   ++  + I+EI+  +C+ + +
Sbjct: 61  SLGLVLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKKSK 120

Query: 121 KKPGKRPR 124
           KK  KR R
Sbjct: 121 KKTRKRSR 128

The following BLAST results are available for this feature:

BLAST of Moc06g36680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156102.1	1.6e-64	100.00	uncharacterized protein LOC111023068 [Momordica charantia]	[more]
XP_038902583.1	5.3e-55	86.76	uncharacterized protein LOC120089238 [Benincasa hispida] >XP_038902584.1 unchara...	[more]
XP_023533769.1	2.1e-51	84.96	uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]	[more]
KAG6606306.1	4.6e-51	83.46	hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022995750.1	6.1e-51	83.46	uncharacterized protein LOC111491189 [Cucurbita maxima] >XP_022995751.1 uncharac...	[more]

BLAST of Moc06g36680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g36680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR49	7.9e-65	100.00	uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1K2S6	2.9e-51	83.46	uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189...	[more]
A0A6J1ESQ9	5.0e-51	83.46	uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC1114374...	[more]
A0A1S3BQH9	9.4e-50	84.68	uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=...	[more]
A0A5A7UQA1	2.3e-48	83.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Moc06g36680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80245.1	1.2e-25	46.46	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.2	1.2e-25	46.46	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.3	1.2e-25	46.46	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT4G00695.1	1.7e-22	46.88	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]
AT4G00695.2	1.7e-22	46.88	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..135
None	No IPR available	PANTHER	PTHR48237	GAMMA-TUBULIN COMPLEX COMPONENT	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g36680.1	Moc06g36680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005319	lipid transporter activity