Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGACAGTCTCTCGGCTCTCCAGTCTCCAAGCTCCACGGCCATTGCGGCGGAGCGATGGCAGATGCAATCGTAGTCGAGGACCAAAAGCGCAGCAAGCACGCTTCATCTTTTTCCACCAGTGCCGACTACGGCGGACAAGACGACGATAAAGTCTCTAAGTCCTACCGATTCTCGTTTCCATCGCCTTCTCCTCCGCGGCAGGAGAAGTTCGTTCACGCCATTCCTATCCTCACCATTATCTGCTTCCTCATCCTTTACCTCTGCTCGCACAGTCCTTCGCAGTCAGGTACCTGCAATTCCTCCCATCGGACGAATCGCTGATCGATCACTTTTTGTTCCACTTTAGTTGAGTCCTAATCGATCATCTCGGTTGATATCCTGCTTTTATTGTTTCAGATTTGGCTCAGTTTCATGGATTCAAGCGTCCTTCAGAGCGTATAGGTATAATGCGGTTGAGGATTTCACGAATTGAGTCACTTTTGTGTATAATTTCTGTAATCGAACCTTTAATTTTGGTGTTTCTGCAGCAGAAATCAAAGCCGATGTTAGCCGACTAATTGAACCGAAGGAAGGCAACATTCTGGCGATTCAAAGCCTCCGTAACCTAAAAGAGATTGAAAAATCATATCCTCCTAAATCTCGCCCTCCAAGGAAAGTCGCCGATTTCTAA
mRNA sequence
ATGCAAAGACAGTCTCTCGGCTCTCCAGTCTCCAAGCTCCACGGCCATTGCGGCGGAGCGATGGCAGATGCAATCGTAGTCGAGGACCAAAAGCGCAGCAAGCACGCTTCATCTTTTTCCACCAGTGCCGACTACGGCGGACAAGACGACGATAAAGTCTCTAAGTCCTACCGATTCTCGTTTCCATCGCCTTCTCCTCCGCGGCAGGAGAAGTTCGTTCACGCCATTCCTATCCTCACCATTATCTGCTTCCTCATCCTTTACCTCTGCTCGCACAGTCCTTCGCAGTCAGATTTGGCTCAGTTTCATGGATTCAAGCGTCCTTCAGAGCGTATAGCAGAAATCAAAGCCGATGTTAGCCGACTAATTGAACCGAAGGAAGGCAACATTCTGGCGATTCAAAGCCTCCGTAACCTAAAAGAGATTGAAAAATCATATCCTCCTAAATCTCGCCCTCCAAGGAAAGTCGCCGATTTCTAA
Coding sequence (CDS)
ATGCAAAGACAGTCTCTCGGCTCTCCAGTCTCCAAGCTCCACGGCCATTGCGGCGGAGCGATGGCAGATGCAATCGTAGTCGAGGACCAAAAGCGCAGCAAGCACGCTTCATCTTTTTCCACCAGTGCCGACTACGGCGGACAAGACGACGATAAAGTCTCTAAGTCCTACCGATTCTCGTTTCCATCGCCTTCTCCTCCGCGGCAGGAGAAGTTCGTTCACGCCATTCCTATCCTCACCATTATCTGCTTCCTCATCCTTTACCTCTGCTCGCACAGTCCTTCGCAGTCAGATTTGGCTCAGTTTCATGGATTCAAGCGTCCTTCAGAGCGTATAGCAGAAATCAAAGCCGATGTTAGCCGACTAATTGAACCGAAGGAAGGCAACATTCTGGCGATTCAAAGCCTCCGTAACCTAAAAGAGATTGAAAAATCATATCCTCCTAAATCTCGCCCTCCAAGGAAAGTCGCCGATTTCTAA
Protein sequence
MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVSRLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF
Homology
BLAST of Moc06g36160 vs. NCBI nr
Match:
XP_022156324.1 (uncharacterized protein LOC111023244 isoform X1 [Momordica charantia])
HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS
Sbjct: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS
Sbjct: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF
Sbjct: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 159
BLAST of Moc06g36160 vs. NCBI nr
Match:
XP_022156329.1 (uncharacterized protein LOC111023244 isoform X2 [Momordica charantia])
HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS
Sbjct: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERI EIKADVS
Sbjct: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERI-EIKADVS 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF
Sbjct: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 158
BLAST of Moc06g36160 vs. NCBI nr
Match:
XP_011652641.1 (uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus])
HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 124/159 (77.99%), Postives = 136/159 (85.53%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGH GA +D +DQKR KH+ S S+ +YGGQDDDK SKS+RFS
Sbjct: 1 MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEK VHAIPILTIICFLILY+ SHSPSQSDLAQFHGFK PS+++AEIKAD
Sbjct: 61 FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLAEIKADGD 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
LI PK+GNILAIQS RNLKEIEKSY KSRPPRK+ADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 159
BLAST of Moc06g36160 vs. NCBI nr
Match:
XP_008466004.1 (PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo])
HSP 1 Score: 240.7 bits (613), Expect = 8.4e-60
Identity = 124/160 (77.50%), Postives = 137/160 (85.62%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGH GA +D +DQKR KH+ S S+ +YGGQDDDK SKS+RFS
Sbjct: 1 MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEK VHAIPILTIICFLILY+ SHSPSQSDLAQFHGFKRPS+++AEIKAD
Sbjct: 61 FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLAEIKADDG 120
Query: 121 -RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
LI PK+GNILAIQS RNLKEIEKS+ KSRPPRK+ADF
Sbjct: 121 HELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 160
BLAST of Moc06g36160 vs. NCBI nr
Match:
KAG7011375.1 (hypothetical protein SDJN02_26280 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 120/159 (75.47%), Postives = 134/159 (84.28%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGH GA +D + DQKR KH+ S S+ Y GQDD+KVSKS+RFS
Sbjct: 1 MQRQSLGSPVSKLHGHGAGAKSDQLPTGDQKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQE VHAIPILT+ICFLILY+CSH+PSQSDLAQFHGFKRPSE++AEIKAD
Sbjct: 61 FPSPSPPRQENLVHAIPILTVICFLILYICSHTPSQSDLAQFHGFKRPSEQLAEIKADGD 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
LI PK+GNILA+QS RNLKEIEKS KSR PRK+ADF
Sbjct: 121 ELIVPKQGNILAVQSFRNLKEIEKSSSLKSRSPRKLADF 159
BLAST of Moc06g36160 vs. ExPASy TrEMBL
Match:
A0A6J1DT33 (uncharacterized protein LOC111023244 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023244 PE=4 SV=1)
HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS
Sbjct: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS
Sbjct: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF
Sbjct: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 159
BLAST of Moc06g36160 vs. ExPASy TrEMBL
Match:
A0A6J1DT40 (uncharacterized protein LOC111023244 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023244 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS
Sbjct: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERI EIKADVS
Sbjct: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERI-EIKADVS 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF
Sbjct: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 158
BLAST of Moc06g36160 vs. ExPASy TrEMBL
Match:
A0A1S3CQ78 (uncharacterized protein LOC103503567 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503567 PE=4 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 4.1e-60
Identity = 124/160 (77.50%), Postives = 137/160 (85.62%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGH GA +D +DQKR KH+ S S+ +YGGQDDDK SKS+RFS
Sbjct: 1 MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEK VHAIPILTIICFLILY+ SHSPSQSDLAQFHGFKRPS+++AEIKAD
Sbjct: 61 FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLAEIKADDG 120
Query: 121 -RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
LI PK+GNILAIQS RNLKEIEKS+ KSRPPRK+ADF
Sbjct: 121 HELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 160
BLAST of Moc06g36160 vs. ExPASy TrEMBL
Match:
A0A6J1HI49 (uncharacterized protein LOC111463852 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463852 PE=4 SV=1)
HSP 1 Score: 240.0 bits (611), Expect = 6.9e-60
Identity = 120/159 (75.47%), Postives = 134/159 (84.28%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGH GA +D + DQKR KH+ S S+ Y GQDD+KVSKS+RFS
Sbjct: 1 MQRQSLGSPVSKLHGHGAGAKSDQLPTGDQKRKKHSPSSSSIVIYDGQDDEKVSKSFRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQE VHAIPILT+ICFLILY+CSH+PSQSDLAQFHGFKRPSE++AEIKAD
Sbjct: 61 FPSPSPPRQENLVHAIPILTVICFLILYICSHTPSQSDLAQFHGFKRPSEQLAEIKADGD 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
LI PK+GNI+AIQS RNLKEIEKS KSR PRK+ADF
Sbjct: 121 ELIVPKQGNIMAIQSFRNLKEIEKSSSLKSRSPRKLADF 159
BLAST of Moc06g36160 vs. ExPASy TrEMBL
Match:
A0A0A0LE94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901050 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 123/159 (77.36%), Postives = 135/159 (84.91%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQKRSKHASSFSTSADYGGQDDDKVSKSYRFS 60
MQRQSLGSPVSKLHGH GA +D +DQKR KH+ S S+ +YGGQDDDK SKS+RFS
Sbjct: 1 MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
Query: 61 FPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIKADVS 120
FPSPSPPRQEK VHAIPILTIICFLILY+ SHSPSQSDLAQFHGFK PS+++ EIKAD
Sbjct: 61 FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQL-EIKADGD 120
Query: 121 RLIEPKEGNILAIQSLRNLKEIEKSYPPKSRPPRKVADF 160
LI PK+GNILAIQS RNLKEIEKSY KSRPPRK+ADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 158
BLAST of Moc06g36160 vs. TAIR 10
Match:
AT2G35470.1 (unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 101.7 bits (252), Expect = 5.7e-22
Identity = 72/168 (42.86%), Postives = 95/168 (56.55%), Query Frame = 0
Query: 1 MQRQSLGSPVSKLHGHCGGAMADAIVVEDQK-RSKHASSFSTSADYGGQDDDKVSKSYRF 60
MQR SL S SKLH + GG D ++D K S SS S++ DY +
Sbjct: 1 MQRISLDSSASKLHSY-GGRKDDTYDIDDLKPASSSPSSSSSAVDYDDHELKDFKPRRLS 60
Query: 61 SFPSP---SPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSERIAEIK 120
S SP + +QEK VH IPILT+ICF+ILYL S++PSQSDLAQF+GF RPS+ +
Sbjct: 61 SLQSPFVTTNQKQEKLVHFIPILTLICFIILYLTSYAPSQSDLAQFNGFMRPSKHLESSD 120
Query: 121 ADVSRLIEPKEGNILAIQ-SLRNLKEIE----KSYPPKSRPPRKVADF 160
+ + + L+I+ S+RNL+E E KS P + RK ADF
Sbjct: 121 ENGDEISGFIRADTLSIRSSVRNLQETESFTTKSLPRRRTSHRKTADF 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156324.1 | 5.4e-83 | 100.00 | uncharacterized protein LOC111023244 isoform X1 [Momordica charantia] | [more] |
XP_022156329.1 | 3.9e-81 | 99.37 | uncharacterized protein LOC111023244 isoform X2 [Momordica charantia] | [more] |
XP_011652641.1 | 3.4e-61 | 77.99 | uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus] | [more] |
XP_008466004.1 | 8.4e-60 | 77.50 | PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo] | [more] |
KAG7011375.1 | 1.1e-59 | 75.47 | hypothetical protein SDJN02_26280 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DT33 | 2.6e-83 | 100.00 | uncharacterized protein LOC111023244 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DT40 | 1.9e-81 | 99.37 | uncharacterized protein LOC111023244 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A1S3CQ78 | 4.1e-60 | 77.50 | uncharacterized protein LOC103503567 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1HI49 | 6.9e-60 | 75.47 | uncharacterized protein LOC111463852 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A0A0LE94 | 1.2e-59 | 77.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901050 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G35470.1 | 5.7e-22 | 42.86 | unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bact... | [more] |