Moc06g35700 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g35700
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Glycine cleavage system H protein
Location	chr6: 27413091 .. 27414987 (+)
RNA-Seq Expression	Moc06g35700
Synteny	Moc06g35700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTCAGAATGTGGGCTTCTTCTACTGCCAAGTCGCTCAAATTGTCTTCTGCATCCAAAACCCATTTCTCTCCTCCATTATTCTCTCTCGCCAGATGCTTTTCCACTGGTAATTTTTCCTATTCCCTCCATTGCCTGCAAACTGTTTGTGTAAATGCTTCTGTGAAGTTAGAGCTTTTTGTTTTTCTTTTTTCTTTTGGTTGGATCCCATTTCCATTCTGTAATGTTGTTTGATTAATTCTCAATTATGATTAGTTTTTTTTATTTATTTATCTGGGTAAGATAAAAGAGTGGCAATTTCTTAGTTGAATATGAAGCAATATTGGTTGAATTTGCAGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCCCTGTTGCTACCATTGGAATCACTGACCATGCTCAGGTGACCACCAAACAGATCATTTTTTGAACAATGTAACTCTTGTTTGCATATATTTTGGGTTAAATTATAATTTCGGTCCTGAACATTTAGTGTTGTGTTTATTTAGTCCATATACTTTAAAGAGTTTCTAATAGGTCCCTACACTTTTATGGCTTGCCTATTTAGTTCTTGTACATTAAAAAGTTTCTAATTAAGTTTGACTTTTTATTTTGTGACTATTAGTGAAAACTTTCAAGTTATAAGAGTTAATAGACATAACCCTGAAAGCTTAAAAGGACATATTAGAAACTTCTTAGGGTACAAAACACTAAATAGATAGAAATACACACAGTTACCCAACACTTGTTTTTCTAGGAACCAAAGTTATAATTTATAGCCAAAATCTTGTGTTTCCAAATAAATGTGTTTCTAGAAACACAGGTAACAATAAACAAGAAACAAGAATATTACCAAATCACCTTTTAAGAACCAAAGTTATAATTTACTGCCCAAATCTTATTCCTTTGAGTGATGTTTGGATAAGAAAACTTATGGTTGCAATTCATTTTGCTGCTAGTGGAATCATGGAAACTGACTCAATCTTTTATTAGAACAAGTTTGGTATTGAAATATCTGGTCTATAGTTGGTATTCAAATTAAACTTGGGTTGGAAGCGCTTTTCATGGGTATTGACAGGACCATCTGGGAGAAGTGGTTTTTGTGGAACTGCCAAAATCGGGTGCTCCGGTTTCTCAAGGAAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCCACCAGTGATATCAACTCCCCAATCTCTGGTGAGGTTGTTGAAGTGAACTCACAGCTCGAGGACTCACCTGGTTTGGTAAAATTTCAACTCCTCAATTATTTGCTAATCTCTTTGGACTCTGTATTTGGTTTGATAATTTTTTGTTGTTGTTGGTTCGAGTTCCTGTATTGTGCTAACTTTAGCATTATCATTCTCGGGCGTTCACTTGTTTCGTTTTTGCATGAGTTTGGGATACCTTTTGGAAAAAAGTGTTTTTCAGCAAGAACCTATTATATAAACACTTTTGGAAGAAATTAGGGTGAGCGTGAGTTTGACATATATTTTCGTTTAAGCACTTTTTTTGTACTGTTTTTTTTAGTAAGCATCTCTCAAATACTTAAATTACAAGAGTTTCAATCACTTGTTCTTAAAAAGAGTTTTTAAATCGAAAACGTACTAAGTCAACATTAATGTGATGCCACTTCAGCTTCTTAGTTACAATGTAATAGATTGTTATTATTACATTTACAAAAGCATAGAGACTAAAACGAAACACGAGATTGAAGTATATTGTTTTATTTACTTCAGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAACCCAGGTGAACTAGATTCCTTGTTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGATGATGCAGCCCATTAG

mRNA sequence

ATGGCTCTCAGAATGTGGGCTTCTTCTACTGCCAAGTCGCTCAAATTGTCTTCTGCATCCAAAACCCATTTCTCTCCTCCATTATTCTCTCTCGCCAGATGCTTTTCCACTGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCCCTGTTGCTACCATTGGAATCACTGACCATGCTCAGGACCATCTGGGAGAAGTGGTTTTTGTGGAACTGCCAAAATCGGGTGCTCCGGTTTCTCAAGGAAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCCACCAGTGATATCAACTCCCCAATCTCTGGTGAGGTTGTTGAAGTGAACTCACAGCTCGAGGACTCACCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAACCCAGGTGAACTAGATTCCTTGTTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGATGATGCAGCCCATTAG

Coding sequence (CDS)

ATGGCTCTCAGAATGTGGGCTTCTTCTACTGCCAAGTCGCTCAAATTGTCTTCTGCATCCAAAACCCATTTCTCTCCTCCATTATTCTCTCTCGCCAGATGCTTTTCCACTGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCCCTGTTGCTACCATTGGAATCACTGACCATGCTCAGGACCATCTGGGAGAAGTGGTTTTTGTGGAACTGCCAAAATCGGGTGCTCCGGTTTCTCAAGGAAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCCACCAGTGATATCAACTCCCCAATCTCTGGTGAGGTTGTTGAAGTGAACTCACAGCTCGAGGACTCACCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAACCCAGGTGAACTAGATTCCTTGTTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGATGATGCAGCCCATTAG

Protein sequence

MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATIGITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLEDSPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH

Homology

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BLAST of Moc06g35700 vs. NCBI nr
Match: XP_022131256.1 (glycine cleavage system H protein, mitochondrial [Momordica charantia])

HSP 1 Score: 335.5 bits (859), Expect = 2.6e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI
Sbjct: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED
Sbjct: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 166

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BLAST of Moc06g35700 vs. NCBI nr
Match: XP_022931257.1 (glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 151/166 (90.96%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +L+LSS+SKTH SPP FS++RCFSTVLDGLKYASSHEWVKHEGPVATI
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPP-FSISRCFSTVLDGLKYASSHEWVKHEGPVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP+SGAPVSQGKSFGAVESVKATSDINSPISGE+VEVN QL+D
Sbjct: 61  GITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNQQLKD 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNP ELDSLFGPKEYTKFCEE+DAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. NCBI nr
Match: XP_023532627.1 (glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 2.0e-80
Identity = 151/166 (90.96%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +L+LSS+SKTH SPP FS++RCFSTVLDGLKYASSHEWVKHEGPVATI
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPP-FSISRCFSTVLDGLKYASSHEWVKHEGPVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP+SGAPVSQGKSFGAVESVKATSDINSPISGE+VEVN QL+D
Sbjct: 61  GITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKD 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNP ELDSLFGPKEYTKFCEE+DAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. NCBI nr
Match: XP_022995342.1 (glycine cleavage system H protein 3, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 3.8e-79
Identity = 150/166 (90.36%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +L+LSS+SKT  SPP FS++RCFSTVLDGLKYASSHEWVKHEGPVATI
Sbjct: 1   MALRMWASSTANALRLSSSSKTLLSPP-FSISRCFSTVLDGLKYASSHEWVKHEGPVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP+SGAPVSQGKSFGAVESVKATSDINSPISGE+VEVN QL+D
Sbjct: 61  GITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKD 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNP ELDSLFGPKEYTKFCEE+DAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. NCBI nr
Match: KAG6606235.1 (Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.8 bits (769), Expect = 7.1e-78
Identity = 146/162 (90.12%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 5   MWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATIGITD 64
           MWASSTA +L+LSS+SKTH SPP FS++RCFSTVLDGLKYASSHEWVKHEGPVA IGITD
Sbjct: 1   MWASSTANALRLSSSSKTHLSPP-FSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITD 60

Query: 65  HAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLEDSPGL 124
           HAQDHLGEVVFV+LP+SGAPVSQGKSFGAVESVKATSDINSPISGE+VEVN QL+DSPGL
Sbjct: 61  HAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL 120

Query: 125 INSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           INSSPYEGGWMIKVKPSNP ELDSLFGPKEYTKFCEE+DAAH
Sbjct: 121 INSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 161

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BLAST of Moc06g35700 vs. ExPASy Swiss-Prot
Match: Q39732 (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.3e-71
Identity = 131/166 (78.92%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +L+LSSA++ HFSP    L+RCFS+VLDGLKYA+SHEWVKHEG VATI
Sbjct: 1   MALRMWASSTANALRLSSATRPHFSP----LSRCFSSVLDGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP++G  V++   FGAVESVKATSD+NSPISGE+VEVNS+L +
Sbjct: 61  GITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +PGLINSSPYE GWMIKVKPSNP ELDSL G KEYTKFCEE+DAAH
Sbjct: 121 TPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

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BLAST of Moc06g35700 vs. ExPASy Swiss-Prot
Match: P49359 (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-70
Identity = 129/166 (77.71%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALR+WASSTA +L+LSSA++ HFSP    L+RCFS+VLDGLKYA+SHEWVKHEG VATI
Sbjct: 1   MALRIWASSTANALRLSSATRPHFSP----LSRCFSSVLDGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP++G  V++   FGAVESVKATSD+NSPISGE+VEVNS+L +
Sbjct: 61  GITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +PGLINSSPYE GWMIKVKPSNP ELDSL G KEYTKFCEE+D+AH
Sbjct: 121 TPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

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BLAST of Moc06g35700 vs. ExPASy Swiss-Prot
Match: P16048 (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDCSH PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.0e-70
Identity = 130/166 (78.31%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +LKLSS+S+ H S P FS++RCFS VLDGLKYA SHEWVKHEG VATI
Sbjct: 1   MALRMWASSTANALKLSSSSRLHLS-PTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFVELP+ G  V++GK FGAVESVKATSD+NSPISGEV+EVN+ L  
Sbjct: 61  GITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTG 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
            PGLINSSPYE GWMIK+KP++P EL+SL G KEYTKFCEE+DAAH
Sbjct: 121 KPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. ExPASy Swiss-Prot
Match: Q9LQL0 (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-69
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKL-SSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVAT 60
           MALRMWASSTA +LKL SSASK+H   P FS++RCFS+VL+GLKYA+SHEWVKHEG VAT
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLL-PAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  IGITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLE 120
           IGITDHAQDHLGEVVFVELP++ + VS+ KSFGAVESVKATS+I SPISGEV+EVN++L 
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 DSPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +SPGLINSSPYE GWMIKVKPS+P EL++L GPKEYTKFCEE+DAAH
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of Moc06g35700 vs. ExPASy Swiss-Prot
Match: P25855 (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH1 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 3.7e-69
Identity = 132/167 (79.04%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSA-SKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVAT 60
           MALRMWASSTA +LKLSS+ SK+H SP  FS +RCFSTVL+GLKYA+SHEWVKHEG VAT
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP--FSFSRCFSTVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  IGITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLE 120
           IGIT HAQDHLGEVVFVELP+    VS+ KSFGAVESVKATS+I SPISGE++EVN +L 
Sbjct: 61  IGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLT 120

Query: 121 DSPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +SPGLINSSPYE GWMIKVKPS+P EL+SL GPKEYTKFCEE+DAAH
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. ExPASy TrEMBL
Match: A0A6J1BP23 (Glycine cleavage system H protein OS=Momordica charantia OX=3673 GN=LOC111004514 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.3e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI
Sbjct: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED
Sbjct: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 166

[Close]

BLAST of Moc06g35700 vs. ExPASy TrEMBL
Match: A0A6J1ET51 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111437487 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.4e-81
Identity = 151/166 (90.96%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +L+LSS+SKTH SPP FS++RCFSTVLDGLKYASSHEWVKHEGPVATI
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPP-FSISRCFSTVLDGLKYASSHEWVKHEGPVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP+SGAPVSQGKSFGAVESVKATSDINSPISGE+VEVN QL+D
Sbjct: 61  GITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNQQLKD 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNP ELDSLFGPKEYTKFCEE+DAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Moc06g35700 vs. ExPASy TrEMBL
Match: A0A6J1JYK8 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 150/166 (90.36%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +L+LSS+SKT  SPP FS++RCFSTVLDGLKYASSHEWVKHEGPVATI
Sbjct: 1   MALRMWASSTANALRLSSSSKTLLSPP-FSISRCFSTVLDGLKYASSHEWVKHEGPVATI 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP+SGAPVSQGKSFGAVESVKATSDINSPISGE+VEVN QL+D
Sbjct: 61  GITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKD 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNP ELDSLFGPKEYTKFCEE+DAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Moc06g35700 vs. ExPASy TrEMBL
Match: A0A0A0LI67 (Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 147/166 (88.55%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +LKLSS+SKTH SP  FSL+RCFSTVLDGLKYASSHEWVKHEG VAT+
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPS-FSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP+SG+ VSQGKSFGAVESVKATSDINSPISGE+VEVN QL++
Sbjct: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           SPGLINSSPYEGGWMIKVKPSNPGELDSL GPKEYTKFCEE+DAAH
Sbjct: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. ExPASy TrEMBL
Match: A0A1S3CQ17 (Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.9e-77
Identity = 146/166 (87.95%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVATI 60
           MALRMWASSTA +LKLSS+SKTH SP  FSL+RCFSTVLDGLKYASSHEWVKHEG VAT+
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPS-FSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60

Query: 61  GITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLED 120
           GITDHAQDHLGEVVFV+LP+SG+ VSQGKSFGAVESVKATSDINSPISGE+VEVN QL++
Sbjct: 61  GITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +PGLINSSPYEGGWMIKVKPSNPGELDSL GPKEYTKFCEE+DAAH
Sbjct: 121 TPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. TAIR 10
Match: AT1G32470.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 263.8 bits (673), Expect = 9.0e-71
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKL-SSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVAT 60
           MALRMWASSTA +LKL SSASK+H   P FS++RCFS+VL+GLKYA+SHEWVKHEG VAT
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLL-PAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  IGITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLE 120
           IGITDHAQDHLGEVVFVELP++ + VS+ KSFGAVESVKATS+I SPISGEV+EVN++L 
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 DSPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +SPGLINSSPYE GWMIKVKPS+P EL++L GPKEYTKFCEE+DAAH
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

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BLAST of Moc06g35700 vs. TAIR 10
Match: AT2G35370.1 (glycine decarboxylase complex H )

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-70
Identity = 132/167 (79.04%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   MALRMWASSTAKSLKLSSA-SKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVAT 60
           MALRMWASSTA +LKLSS+ SK+H SP  FS +RCFSTVL+GLKYA+SHEWVKHEG VAT
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP--FSFSRCFSTVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  IGITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLE 120
           IGIT HAQDHLGEVVFVELP+    VS+ KSFGAVESVKATS+I SPISGE++EVN +L 
Sbjct: 61  IGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLT 120

Query: 121 DSPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +SPGLINSSPYE GWMIKVKPS+P EL+SL GPKEYTKFCEE+DAAH
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

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BLAST of Moc06g35700 vs. TAIR 10
Match: AT2G35120.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-49
Identity = 104/167 (62.28%), Postives = 123/167 (73.65%), Query Frame = 0


Query: 1   MALRM-WASSTAKSLKLSSASKTHFSPPLFSLARCFSTVLDGLKYASSHEWVKHEGPVAT 60
           MA R+ WAS  A  L++S A +       FS     S VL  LKYA SHEWVK +G  AT
Sbjct: 1   MACRLFWASRVASHLRISVAQRG------FS-----SVVLKDLKYADSHEWVKIDGNKAT 60

Query: 61  IGITDHAQDHLGEVVFVELPKSGAPVSQGKSFGAVESVKATSDINSPISGEVVEVNSQLE 120
            GITDHAQDHLG+VV+VELP  G  VSQGKSFGAVESVKATSDINSP+SG+VVEVN +L 
Sbjct: 61  FGITDHAQDHLGDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELT 120

Query: 121 DSPGLINSSPYEGGWMIKVKPSNPGELDSLFGPKEYTKFCEEDDAAH 167
           +SPGL+NSSPYE GW+IKV+ S+ GE + L    +Y+KFCEE+DA H
Sbjct: 121 ESPGLVNSSPYEQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

The following BLAST results are available for this feature:

BLAST of Moc06g35700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131256.1	2.6e-88	100.00	glycine cleavage system H protein, mitochondrial [Momordica charantia]	[more]
XP_022931257.1	1.5e-80	90.96	glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata]	[more]
XP_023532627.1	2.0e-80	90.96	glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. p...	[more]
XP_022995342.1	3.8e-79	90.36	glycine cleavage system H protein 3, mitochondrial-like [Cucurbita maxima]	[more]
KAG6606235.1	7.1e-78	90.12	Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperm...	[more]

BLAST of Moc06g35700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39732	2.3e-71	78.92	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN...	[more]
P49359	1.5e-70	77.71	Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN...	[more]
P16048	2.0e-70	78.31	Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDC...	[more]
Q9LQL0	1.3e-69	79.04	Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P25855	3.7e-69	79.04	Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Moc06g35700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BP23	1.3e-88	100.00	Glycine cleavage system H protein OS=Momordica charantia OX=3673 GN=LOC111004514...	[more]
A0A6J1ET51	7.4e-81	90.96	Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111437487 ...	[more]
A0A6J1JYK8	1.8e-79	90.36	Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE...	[more]
A0A0A0LI67	1.3e-77	88.55	Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=...	[more]
A0A1S3CQ17	2.9e-77	87.95	Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 S...	[more]

BLAST of Moc06g35700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32470.1	9.0e-71	79.04	Single hybrid motif superfamily protein	[more]
AT2G35370.1	2.6e-70	79.04	glycine decarboxylase complex H	[more]
AT2G35120.1	1.5e-49	62.28	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.100		coord: 31..162 e-value: 2.6E-53 score: 181.1
None	No IPR available	PANTHER	PTHR11715:SF32	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..166
IPR033753	Glycine cleavage system H-protein/Simiate	PFAM	PF01597	GCV_H	coord: 42..161 e-value: 3.8E-48 score: 162.4
IPR033753	Glycine cleavage system H-protein/Simiate	CDD	cd06848	GCS_H	coord: 44..138 e-value: 1.02204E-52 score: 160.777
IPR017453	Glycine cleavage system H-protein, subgroup	TIGRFAM	TIGR00527	TIGR00527	coord: 40..163 e-value: 1.2E-46 score: 155.9
IPR002930	Glycine cleavage system H-protein	PANTHER	PTHR11715	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..166
IPR002930	Glycine cleavage system H-protein	HAMAP	MF_00272	GcvH	coord: 39..160 score: 36.471268
IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	PROSITE	PS00189	LIPOYL	coord: 82..111
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 57..139 score: 28.947098
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 38..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g35700.1	Moc06g35700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019464	glycine decarboxylation via glycine cleavage system
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0005960	glycine cleavage complex
cellular_component	GO:0005739	mitochondrion