Moc06g35470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g35470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Transposase, Ptta/En/Spm, plant
Location	chr6: 27234654 .. 27235107 (-)
RNA-Seq Expression	Moc06g35470
Synteny	Moc06g35470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTGGTAACTTATGTTGTATTTGTTGACCACTAATAATTGAATATGTTGTTAACTTGTTTTAATGACTACGTTTTGTAGGAGAAGTTTGCTGTCGATATATCTCAGCCACATGTGCATAGATATATTTTATACGAGATTGGAACTCGATTCAAAGATTATCGAGCGAAACTACATCGCCATTACAAAAAATCACGTGATCCAGCACGTGCTCGCCAAAAGCCGTATAAAGACATAAAACAAGAAGACTGGAACATATTGTGTGATAGATGGGAATCTCCTGCATGGAAGGTAACTAATATATGATCTTAATTCTTTGTTATCAGTTTATAAGTATCGTTTCTTAACTAAACATGTAATTTTGTAGGAAAAATCTGCCAGAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTGGACCAAAACCATTTCTGTGTCATTGA

mRNA sequence

ATGTTGCTGGAGAAGTTTGCTGTCGATATATCTCAGCCACATGTGCATAGATATATTTTATACGAGATTGGAACTCGATTCAAAGATTATCGAGCGAAACTACATCGCCATTACAAAAAATCACGTGATCCAGCACGTGCTCGCCAAAAGCCGTATAAAGACATAAAACAAGAAGACTGGAACATATTGTGTGATAGATGGGAATCTCCTGCATGGAAGGAAAAATCTGCCAGAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTGGACCAAAACCATTTCTGTGTCATTGA

Coding sequence (CDS)

ATGTTGCTGGAGAAGTTTGCTGTCGATATATCTCAGCCACATGTGCATAGATATATTTTATACGAGATTGGAACTCGATTCAAAGATTATCGAGCGAAACTACATCGCCATTACAAAAAATCACGTGATCCAGCACGTGCTCGCCAAAAGCCGTATAAAGACATAAAACAAGAAGACTGGAACATATTGTGTGATAGATGGGAATCTCCTGCATGGAAGGAAAAATCTGCCAGAAATAAGATGGCACGTAGTAAATTGAGGTTCAATCATCGAGGTGGACCAAAACCATTTCTGTGTCATTGA

Protein sequence

MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDWNILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH

Homology

[Close]

BLAST of Moc06g35470 vs. NCBI nr
Match: XP_022159083.1 (uncharacterized protein LOC111025525 [Momordica charantia])

HSP 1 Score: 211.8 bits (538), Expect = 2.6e-51
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDW 60
           MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQE W
Sbjct: 88  MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEXW 147

Query: 61  NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH
Sbjct: 148 NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 187

[Close]

BLAST of Moc06g35470 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDW 60
           MLLEKF VDISQPHVHRYILYEIGTRFKDYRAKL+RHYKK RD ARARQKPYKDIKQEDW
Sbjct: 1   MLLEKFVVDISQPHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDW 60

Query: 61  NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           NILCD+ ES AWKEKSA+NK+ARSKLRFNHRGGPKPF CH
Sbjct: 61  NILCDKLESLAWKEKSAKNKVARSKLRFNHRGGPKPFQCH 100

[Close]

BLAST of Moc06g35470 vs. NCBI nr
Match: XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 90/100 (90.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 1   MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDW 60
           MLLEKF V ISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRD A ARQKPYKDIKQEDW
Sbjct: 1   MLLEKFVVVISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDQAHARQKPYKDIKQEDW 60

Query: 61  NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           NILCDR E PAWKEKSA+NKMA SKLRFNHRG PKPF CH
Sbjct: 61  NILCDRLEFPAWKEKSAKNKMASSKLRFNHRGEPKPFQCH 100

[Close]

BLAST of Moc06g35470 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 9   DISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDWNILCDRWE 68
           DISQ HVHRYILYEIGTRFKDYRAKL+RHYKK RD ARARQKPYKDIKQEDWNILCD+ E
Sbjct: 14  DISQLHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWNILCDKLE 73

Query: 69  SPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           S AWKEKSA+NK+ARSKLRFNHRGGPKPF CH
Sbjct: 74  SLAWKEKSAKNKVARSKLRFNHRGGPKPFQCH 105

[Close]

BLAST of Moc06g35470 vs. NCBI nr
Match: XP_038895321.1 (uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida])

HSP 1 Score: 142.9 bits (359), Expect = 1.5e-30
Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 0


Query: 2   LLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDWN 61
           LL +F VDISQPH+ RYI YEIG RFKDYR  L++HY+K  DP  AR+ PYK    +DWN
Sbjct: 209 LLNQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEARRNPYKYTTTDDWN 268

Query: 62  ILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFL 99
           ILCDRWES +WKEKSARNK++RSK+RFNH GG K FL
Sbjct: 269 ILCDRWESSSWKEKSARNKVSRSKIRFNHCGGSKSFL 305

[Close]

BLAST of Moc06g35470 vs. ExPASy TrEMBL
Match: A0A6J1DXU5 (uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025525 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDW 60
           MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQE W
Sbjct: 88  MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEXW 147

Query: 61  NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH
Sbjct: 148 NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 187

[Close]

BLAST of Moc06g35470 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.8e-45
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDW 60
           MLLEKF VDISQPHVHRYILYEIGTRFKDYRAKL+RHYKK RD ARARQKPYKDIKQEDW
Sbjct: 1   MLLEKFVVDISQPHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDW 60

Query: 61  NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           NILCD+ ES AWKEKSA+NK+ARSKLRFNHRGGPKPF CH
Sbjct: 61  NILCDKLESLAWKEKSAKNKVARSKLRFNHRGGPKPFQCH 100

[Close]

BLAST of Moc06g35470 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 90/100 (90.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 1   MLLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDW 60
           MLLEKF V ISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRD A ARQKPYKDIKQEDW
Sbjct: 1   MLLEKFVVVISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDQAHARQKPYKDIKQEDW 60

Query: 61  NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           NILCDR E PAWKEKSA+NKMA SKLRFNHRG PKPF CH
Sbjct: 61  NILCDRLEFPAWKEKSAKNKMASSKLRFNHRGEPKPFQCH 100

[Close]

BLAST of Moc06g35470 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.6e-40
Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 9   DISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEDWNILCDRWE 68
           DISQ HVHRYILYEIGTRFKDYRAKL+RHYKK RD ARARQKPYKDIKQEDWNILCD+ E
Sbjct: 14  DISQLHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWNILCDKLE 73

Query: 69  SPAWKEKSARNKMARSKLRFNHRGGPKPFLCH 101
           S AWKEKSA+NK+ARSKLRFNHRGGPKPF CH
Sbjct: 74  SLAWKEKSAKNKVARSKLRFNHRGGPKPFQCH 105

[Close]

BLAST of Moc06g35470 vs. ExPASy TrEMBL
Match: A0A6J1DTP1 (uncharacterized protein LOC111023906 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023906 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.5e-17
Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 2   LLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDI-KQEDW 61
           ++  F V++SQ  + +Y+   + T FK++RA+LH HYK++  P  AR+KP+  I K +DW
Sbjct: 51  IVNLFKVNMSQAIIRKYVHTALRTTFKEFRAELHAHYKENGPPNVAREKPHARITKLQDW 110

Query: 62  NILCDRWESPAWKEKSARNKMARSKLRFNHRGGPKPF 98
           + LCDRWE+P WKEKS + K +R+KL +NHR G K F
Sbjct: 111 HKLCDRWETPDWKEKSGKAKRSRAKLPYNHRAGSKSF 147

The following BLAST results are available for this feature:

BLAST of Moc06g35470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159083.1	2.6e-51	99.00	uncharacterized protein LOC111025525 [Momordica charantia]	[more]
XP_022143616.1	1.4e-44	90.00	uncharacterized protein LOC111013476 [Momordica charantia]	[more]
XP_022153681.1	3.1e-44	90.00	uncharacterized protein LOC111021138 [Momordica charantia]	[more]
XP_022148911.1	1.4e-39	89.13	uncharacterized protein LOC111017461 [Momordica charantia]	[more]
XP_038895321.1	1.5e-30	68.04	uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]	[more]

BLAST of Moc06g35470 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g35470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXU5	1.3e-51	99.00	uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CQT5	6.8e-45	90.00	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DLF1	1.5e-44	90.00	uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1D6S9	6.6e-40	89.13	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DTP1	3.5e-17	47.42	uncharacterized protein LOC111023906 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Moc06g35470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 4..98
None	No IPR available	PANTHER	PTHR33499:SF17	OS12G0231700 PROTEIN	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g35470.1	Moc06g35470.1	mRNA