Moc06g34880 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g34880
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribosome biogenesis protein BRX1-like
Location	chr6: 26511737 .. 26526377 (+)
RNA-Seq Expression	Moc06g34880
Synteny	Moc06g34880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTAAAAGATCTTCTTACATGCAAAAAGATACACAAGACTTTGGGAAAGAGACTAGCAGGGAAGAGCGAGTTGATGAAGTCGCATAAGCGAGAGAATGCATCGAGGGAGAAGACTACAGTGGGTATTGAAGTCAAAGGGAATATCTCTAGAAAGGCAACAGACTTGGGTGAGAGCTCCAAGTCATCAGAGGAATCTTCCTTCAGAGGTCGTTGGGTTCGATCGAGAAAGGAAGCTACATGGACCACTTAGTTTGAATGAGAACACGTGGCTGTGTCTCTAGCGTCTGAGGGACAAGACCATGTAAGATTGTTTAGTCTCAGGATAATCACAAACAGAGCTTGGATAGGACCGAGTAGTGTGGATCAATTCGTTGATATAGTAGTCAGAACTGTGTCTTGACAAATGGTGTCAAGAAGTTGATGGGACACTGTTGATGCAGTGGGAGGCAGAGAATTGTCGCTTTGTCTCAAAGTGGGAGATTGTTGGAATTATAGAGTCAAAACAGGAAACTAATGTCCTATGAAGCAAATGATTTTTCAACACTATTACCAATTCTTACCGGGGATAGAATATTGTTATCTTATAAAGATTACAATATTGTTTTCCTGTAAGAATTAGAATATTTGACCTCTTATAAATAGTAAATAAAAAAAGAGACTTGAGTGGTTGTGGGTAGTGTTGAAAAAGATTCGGTATCCAGTGGGTATACTTAGAAGCTAGAGGGCTTTTGTTGGGACCTCTTGGAGATATTTTTGGAGAGAGTTTTGTATTTCAATGCTTAAACAATTATTAGTAAATTACCCACATATGAGTGGAAGACTGGATGTAGCCTTTAGTGGTGAACCAGTATAATTTGCCGTGTCGTTATTCTTGTGTTTTTATAGTTTTCTTTCTATTTGCATATTTTTTTGTTGTGTTTGAATATTTATGTGGAAGGAGAAATTTATTCAGGGTCTTCAATTTTCCAACAAACATGTCGGGAAAAAACGATTTTCTCCTCATGTTGATGTCGAGACCGTCGAACATTGAAATGTAGACGTGTCGAATGAAATTTTGAACAATGGCGAGTATGATATTAATTCATTAATTACATTTAAAATACAAATCACAATGGAAAATCGAATTGAAAGCATATGGCAAAAATATTAGTTGTTTTCTATTTATTTATGGTAAATCGTGATGAGCCAAAAAAAAGTTTTAAAGAGTGAGGATGGAAATGGAAATAAAAGCATATCCTTGGCCACAACATTAATTTTGTTTCCTTTTGTGTTTGAAAATTTGTATGAAGCCATCAACATTTCCAATAAAAATAGCAATCGAAACCGAAATGAAACCATATCTTTCAACATTAATTATTTTCAATATATTTTTAGAATTTGTGAAAAACCAAAAAGGAAATGATGTCAAATTAGTCTAGATACTTATGTTCAAAAAATAAAAACTTTAATTCCATATATTAAAAAATTAATTCATTGCATGTCTTAACGAATTTCAACTATAAAAAGAAATCATCAATCATTGCAAAATGCACTATACAATCCATTAAAGTTTTACAAGGCATATAAGAAGATATAAGCAATTTTTACAAGGTCGATAAAAGAATGGCTAAAGTAGGAGTTATTTCCATGGTTTTCATTGCCTTCCTCATCTTGTACTCGGGTATGACTTCTCTTTTAGACTGATCGGTTTTAAGTTACTCTTAAAAATAGAGGTTTTAGCTATACATTTTTCTCTATTAATACTTCTAGGAAAATAAATAATTATGATTATGTGTTGGAGTCACTTTTGGCAAGGCCAACTACTCTTGCCTATCGAAATAATAATGATTTTGAGTAATATAAAAATGTGTATGGAAAAAGTAAACTCCAAATTCATATCTCATATCTCGTTTTTTTTCTCTCTCTCCTCCCCACAACATCTTACTTCTTCTTGTTTCTCTCTTATGCATTGCTTCATTTTTTTAAAGTTTTTTATTTCCATTTTACAAAATCACAAGTATCTCTCAAATTAATTTGTCTTTTTTATTTTTAATTTAATGTATGTTTTTGTATTTAAAAAATATTAGGAAAAAAAGATAACGAAACCATTTTTTTTAAGAGTTCAACTTTCTACCCCATGTACTTTTGCATTGTAAAAAAAAAATACCAAGTTTCGTCTGATGTCCGAAGAAAAATATAACAACTTTTTTTGTAACAATAAAAAAATTCTTTTTTAAATAGTATGGAAGAGATACAGTAAAAAATATACAATAGATTTGGATAAAAAATATATAACGATTTAAAAATAGTAAGCAATAAAAAAAAATAGAGAAGGCGAAGATACAAAACAGAGAAAAATAAGAGAAAACATAGGAGATATTGATGAGATACTAAAACATAATAAATAATTAAAAAAAATAATTGTCTATATACTACTGGACTACATAGATATTCAGAAGGAAGCTTCTCTTGAATCTTGCTGAGCCAAGTTTTTTTTCCTTTGGCTAAAGCACTTAAGAGTGCTTGAAAATGTGTGCAACCAAACATCAAAGTGATTTATTATGTAGCACACAATTGGTTAACAACATCGTAATTAAATTGCTTTCGTTTTGCTCCACATAATTACTCGAGTATTTTTAGAAGACCATGATTTTGAAAGAAACATGTGTTGTGCAAAAAAGTTTTTGGAAGAAGCAGTAATCAAGTGTCGTTGTATTAAAAAGATTGAGCATGAAAATTTTGAAGTGCTTAACCAAAATGGATTTACAGGGAGTTTGAACACAAGTGCTCAATTGTGTTGCAAAGACCATCCCGACTTTGGGGGCTGCAACCCAGACGATGGCAGGTGCAACACTCACTGCATTTCTGGCTGTGAAAAAGGAGGATTTTGCAAGAAAGTTGGGGGTGGCCATGTCTGCCATTGCTATTGCTGATTTCATCTATTACCTTTCTTTCACTCCTCTTTCTGTCCACAATGTTATGACAAATGAAAATTAATAATAATAAAGAAAGATGGCAACTTCATTTTTGTCGAGGCGAGTCATACGACGAACAAGTTAAAATGACGATGACGTGATTGTTTACGGTTTCTCAATGGCTTTTGAGTCTCCCAAATTCTTTCTCTATATCGAGGAGCTTGAAATTTTGTAGAAATAATGGCAGTGATGGATTTGTTTAGTTCAACAATTATCAGAGTAGAGAATGAAACCATCTAATTCGAGATGACAATAGATGTCTTATTCTATTGCATTCGAATTGGCATGAACAATAGAATTGTGAGACTCTTAAAAGGAATGAAGTGCTGCAAAAATGATTTGTGTCGGTGTAGAGTGAGCGATATTAAAAGGTACAAAAGGATGGGAAATGAAATTTAATACAATGAGGGCTACTTTATTAAAAATTTCATACATTACGGAATTCTATTAAGCATACTCTTAAATAATGTGAGCTAACCATAATTCGACCACCTATGTTGACTCGAATATATAGCATTCATCATGACTATAACGAAAGATCAATCCATTGAAGCTATCAAAGTATTTCTATCGCCTATCTTGACTTGAATATATAAATTCCTTAATAAGTGAAATTAGAAGGGTTGATGGATTAAGTGTAGGACAGAGTTCGAGTTGGTAAGATTATCACTAAAGATCAATCTTATATTGATTACTTCTTTAATCTTCCCACTAATGAAGATGTGAATTTTTAATACTCATCTTTGGTTTGTATGAATAGTCCGACTCTTCTATGTAATAGCTACACGGATTTTAACATCTTATGTATGGACATTTATATTTTTTTGTTCGCTTATGAGATTATATTATCCTTGTTTTGGCCAAAGCGAGCACAGTTTAGTGGTAGTTGACATATATATCAAACCAAGAGCTTGTGAGTTCGATCTCCTACCTCCACATGTTGTACTAAAAAATATATTATCCTTGTAGGTTTAATTTACTGTAGGGAAAATGATTAACTTTGTGTATGTTTAGGAGATTATTTTAATTATATTTGATTATGAAATATAACCTTTATTGTTAATTCTTCAATTTGATGTACTCATTAATTATAATTAAAATATTGATTTCTGAATGAATTTGCTAATTAATTTTTGTTATTTCTTTTAAGATATATTGCTAAATAATTTTTTTATTTATTTAAAGGTTGTTAAATAAAAAAGAAAATAGAAATAAAAGTACATTACTTATAATAATTAGTTATTATACAAATGAATGAAAATTAAATTAAAATTTAATTCTTTCAAATTATTTTAAGTAATTTGACTTAATAAAATCAAATTATCTAACAACACTTAATTATTCAAAATTAGTTAATCTAAATTAATGGTTGAGATTAGATTTTGAATAATTTTAATGCAAATTTTATATTTCCCCAAGAAACACACACATCATTCAATTTCTATAAAAATGTGATAACATTCTAGGAATATCTTTAATTCTAAGGCATTTTATTCCTAAGTAATTAGTCTTATTATGATTTTTTTTCACAAATGTGATTTTTGAACTAAGTGATTTTAGTTATTCCAAAATTATTATTGTATCCTAAATCGACACAACTAATAAAACTACCAATTTGAATTATATTTTTCGACAAAAAAATTATTAGTTAAAATTTCTCACTCGCATACCAAAACGAACATAGTTCAACGAGGCATATACCTCCAATCAAGAGGTTGTGAATTTGGATTTCATCCCCCAACATGTTATATTAAAAAAAAAATCCTTGCGTTATTGTGTTAAAAAAAAAAGTTTTAAGGGGTAAAATTGTAATTTAGCCTAAAAACAAAATATGCAAACCCTATTTAAATTTCCTCCCTCGTATTTTTTCAGTTCTTCTTTGAAAGCGGTAAGGTGCTGCCCTGGCTGCTTAGATTACTGTTACAGAGACCGCCGCCGGAGAGTGCTGTCGCGCCGCCTGGAGCTGCCGTCGCCGCCGTTAACCGCCGAACGTGAGCCTCTCTCCCACTCTCCCTCTCGATTCCTTCTTCTTCCTTTTTCCCTTAATCTCTACAAATTTCTTCAACTTCCATTGCTTGATTTATGTGCAGTGTTTCTGAAGGGGGCAGTATTCTCAATGGCGAAGAAGAGGAAGCATAGCGAGGCTTTGGCTTCGGTCGCGGTTAAGAAGGATAGCGACGCCCCCGAGAGACCCAAGCGGACGCTCATGGGATGGAAAGACAAAGAAGTGGGGAAAGAGAGCGAATCAGGTTCTGATCATGCAGTTTTTCGGAATAAAGAGAAGGTTCTCGTTACTTGCTCCCGCCGGATCAATTTTAGGTACGATATATAGGCAGGGAATCAATTTTAAGTTCGCCGAACAGCCTTAGTTGTTGCACTTTCTATAGAAAATCAGAAGATACCATGGGGCATCTATTCTCTCATTGCAACTGAATTTGTAGTCTGAGTTATGGAACTCTTTAACTTGGTTGTTGGATTACCAGGCAAAGAAGAACATGGTTCAATAGTAATGTTGACAAGGTTTGAGAGGAAAAGAAATAACTATTTGGTTGGATGGTGAAAGCTTTCTTTATGGGCTTGTGTTTAGAAAGAAATAGTAGTAGGATATATGATGATGAGGATGGACATCAGAGAGAAGTTTATGGTTTGGCAAAATTTCAATGTTCTTTGTGTTCACTCCCTAAATTTCGATTTTCTTGACAAGCCTTTTTGTAATTACATCATTTTAATTCAAATTAGGTCAGGTAGTTTGTGATGTAGGTTTTCACTTATCAATAAAAAGTTTTTCCTTAATAGGATTGGTAATTTTATTGACCTGTGTGATTGTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTCTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGTAAGGGTGCAACACTAAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCTCTCTATTTTTTGAGGTTAGAACTCCTGCATTGCTCTCTACCTAAGTCTAGACTTGGATTTCCATTTGTAATCTGTATTACTTTATTTTTGGAATTTGCTTTCCATTAGAATAAGGATAATAACCTTTTGGCGCCTGGTTAGGAAGGATGTATTATGTATTCTTTTCTTTTCATTATTTTCCTACTTGCATTCTCATCATTTTCGTACATTGTGATGACATGGCTTATTTTTCCCATCATTCTGTCAAAATGACTTGGAGTTTGATTTTTGTACTTGATTCTAATGGATCTTTTTGGTCCTCTGGATTTTGTTTCTATAAAACTGAATCAATCATAAATCATTTTTGTTCAAAGATCAATAATTTTCAGTTCTTTTACTTTATGTCGTAGTTATTTCTATCGTTTTTAATGCTGTATAGCATTCACATAACTTTATTTGTTGATCTTTTTGTCTCCAATTGCAGTGCAGAAAACATAAAGATCTATATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTCTAGTTAATGCTGGTAATTTTTTAACTTATAATTAAATTATATTATCCTGAATTTTGTGACGAAATCATAGAAAATCAGGATTTCTTAGTTCAATGCAGTTTGCTTATTTTTCCATTTTTGTTTTCAGTGCATACAATGGAAGAATTGAAACTTACAGGGAACCATCTGAAGGGTTCTCGTCCAATTTTGACATTCTCGTCTAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATGATTGTTCAGGTATCAATTGAAAACTTTTCTTAAGCATAGTTCATGCTTAAAACTATTTTCCCTTCTACACGTGAATGTATCAAATATCAAATTCCTTCTCTTTCTTCTTAGTTTACCTTTCTTCATTTCTTCGTTATTTCAATCCAGATCAAACACTTAATGAAATTGATTAAATAATGTTTGCACAGCCCAATTATCATCTAGAATTCTATGACATGAATTTTGGTTATGTTATTTCATAAAATTTATATGCTTGCTTTTGTATTGGTTCTTTTTTTCCCTTTTATTACCCTTTTGTATTCTTTTCATTTTTATCAATGTAAGTTGATTTTCTTAAAAAAAAAAAAAACGTTAATGCACTTATTTCATGTTCCTATGGCATAAAAAAATTGGATTAGTGAATCTTGTGATAGCTCTTTTGTGGAGATTATATGGTTCAGGAGAAAGAAGAGAATCTTTAAGGGAGGAAGCCTGCCAATTGGGAGTCCCTGTTTTTGGCACTAAGGGCTATTCCCCCATAACTTTTCCAATAACGAAATTTCTTCTTTGTTTCTTATATTTACGTATGCGTGTATTTGTGCCTGACTTCAGATTTTTATGCTGACATCTCAATACTATCGTTTCTCTTTTCATGCTGCATTTATTTTTTTCAAAATTAGAGTCCCTTATATTTTGATTTGCTGCCTATTTACTATGTTATGAAAAATAGTAGATTCCTAGTTACTTTTCCAAATAATGGCACTTCTGTTTAAAAGTCCTATGAAGTCTTCGTTTTAATATGTCATAGTCTAGCTTCAACTTATTTTTGTGCCCTCAGATTTTTGGAATTCCGAAAGAGCATCGGCATTCTAAACCGTACCATGATCATGTATTTGTTTTCTCCATTGTTGACGATCATATATGGTTCCGAAATTACCAGGTATGCTATATTTATATTATGTTAGTTACAGAATTAAAGCTCTCATATTTATACATAGTCATTGTGTAACTTGAGTTCAAAGTTTAAGGAGTTTGTGTAACCACACCTGAGCGACAATGTGTGTTTTGGGGCGGAGTAATAAGAACATTGTTAGGATAAATCTTAGAAATATTATTATCGATCGTCATTAGCTAATGATTTTGTAGTGGTTATAAATACAGTAGGTTGGTGGAGGGGTTTAAGATTAAGCAGATCTTGGTAATGGTCTTTGGGAGAGTGATCTCTCAAAGTGATTGGGATCTGGTAATTTTCCTTTCTTGTCAACATTTTCTATTAATTTTTAGTTAATTTTCTAGTTCCTATCAGACTCCTTAAACCATTTGCATATAATTGTTCACAGTTAAAGTTATGTGTTCGCTTTTGCACTAACTGTTGGTATATTCGTCCCTGTTCGGGGTTTGTGTGCGGGTGTTCCTTTCCCTGACTAACAGTTACTTATGATATGGCGTCTTTCTTCTTTGTTTGGTGTTATCAGATAGCTGTTCCACATAATGAATCAGCAGATAAAGTAGCCAGAGGAGGACTAGATAAAGTGACTCTTATTGAGGTCTCAAGTTTTTCTCTTCTTGCTTAGTTTATGAATGAGTTTTCATACTTTTTAGCTGGACTTCATATATTTGTTTTTACAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTACATATCGCCAAACCAGGTTAGATGATTAAAGTTTTGATCATCTGGATTTGATTACACTTTTTCATGCCTTTTAGCACTATTGGGATTTGGGGAATGGGGGTGAAAATTGCAAGTATATATTTGCATTAATTATGAACTAAATACAGGAGGCATTAGCTATTACCATGCTTGGTAATATTTCCGTTTCTTGTTTTTCATTTACTACGTACAATTTTGTTTTTTCTTGATTGAAAATGAGAAATGAAAAACAACATTACTAAACAGGCTACAAGCTTCCACAGTTTACGAGAGACTAAAATATCAAAATGACAAATAAAAATAGTGTCATTGCAAAGGGGGGGAAGTATTGAATATTTTTTCAGTTCAAGGTTACTTGAGAAATGATTTTCTGATCTCATTCACCATTATGTGATGCTTTTGTCTGTTCTTTTAATACATGGAGTGTACCCACACTTTTGACTAGTCTCATGGGGTTTTTTTTTCCCTCCTGTTCAAAGCCTCGAAAAGGGCAATATTCTTTCGAGTACTTCGGAGAACAGTTAGCTCGTTTTACACGAATTTGTAAATGGGCACAAATTGGCCTTTAACTATGTATACTTTTGATCAATGCCAACAATTTGAACCAAGTTCTCTATAATCTGACCTTCAATGGTAGCTGTAAAATTCTCATGTTTTTCACTTCCCTCCCTAGATTCGTGCTTTGGAGAAAAAGCAGAAGGCCGGGAAATACTCGAAGAAAGTCAAAGCAAAAACAAGGAGGAAGATGCATGAGCTATCGAATCCTTTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAGTCTTTTTTCTGAGGACCTAATTTTGCCCAGGAGTTCCTCACCCTGGGATGTTAAATGGGAAATTTTGTTCTATAATACTGTTGGTGGTTACAGACATTTATGTTGTCTAAGATAAGATCTGTAGTGCAAATTTTGGCCTTGTTTTATTTTTTATTTTTTGAAACCTATTCTGTTTTTTCTATGTTTATTTTTTTAAAAGATCGTTGTTAAACCAGTCTCATTTTAGATATGATTTTTATAAGACGAAATGTTATATCATATTTGGCTATTTGATATTTGATTTTGTGTTACTAGGAAGAGTTTCAAAAGAGAAGTGTAAAGAATTTAGCTTGGAAGGCCATTTCATGATTTTATTAAATTATTAGTGGCATGATCCAATTTGGGACTTGGTAGGAAGACATATTTATATACTTACTGTAACAATATACTAAGGTTGAAATTCGAATTTTGTTTTTTATAAAATTTCTCTGACATTTTTGTTTCTTCCGACTTTTCTTTCTCTAAAAATTTTGTCATATTTTCTCTTTAATATTTAAAACTTTAAATATTAGTCATTCAAAATCATTTTTAATAATATAAAAATCACTTCAAAAGATTTTGAATAATATAAAATCACTTCAAAAGGTGTGTAATGGAATGTTAAAATGATTACATGAAAACCACTCTTAGATTGAATCAAACTAAATAGGTTCGGTTAACAATTTTGATTTGAATCTAACTGAACCAAACAATTGAGAATAGTTTAGTCGATAAATCAACTGAAGCCAACAAATTATTATATAATATTTAGATTTAAATATCATTTTGACTCTCAACTTATAAAATGTCAATTTAGTCCTAAACTAAAAAATAAAACAATTTTTGTCCATACATATTTAAATTGTATTTTAGTATTTGAATTTTTTTTTTATCATTTTTGTCTATTATTCTGGCACCTAATTTCCGCTTATCTTGTAATAGACTTAACAAACTTACGTGGTACTAAAAAAAACAAACTTACATGAGTCTAATACATAATTACGTCAACACATTAGTACATTTATTTAAAGTCGTGTTATTTGCAGTTTAAACGTATTAAAGATGAAGATCAAAATGATTATTTTATTAAATTTTAGAGTAGAAATTTTTAAAATGGGAATAAATCTAAAAAGTTTAACAACTAAAATATATTTTTTAAAAGTCCAGAGACCAAAGAGAATTTAAGGTTATAATTTTGTATTAATATCGCTTTGGAAATAATTTGATATTAAATTATATAATATAACTATATTTCTAAGAATATTTCCCAGAATTATAAATTTGGCGGTATTTTAGTGGCCGCCTGCGGCTTGTTCCTCTCGCCGCCGCCGTACGCCGCCGCTCACCTCAACTGCCGTTCGTTGCGCCTATGTAAGGGATCGAATCGATTGAACCTTATGTATATTTATCCTTATAATTGTATGTTAAAGGATCATTTAAAATTGTACTAATTTAGGGATGGGAGGTGAAATTCTGATTTCCAATCTTACCAGATTGTGAGAAAAGATCAGTCAGCGTTCGAGATCGCAAGAACAAGGATCCATATTCGCCGAACAGAAGCCAAAGCAACACTCGGGGAGCTGCAGCAGGTTTGTGTGTTTTCTATCATGTGATTGAGAACTGCGAAATCTTGTTTCTGCTACGATATGGATAATTATGGGAAAATTGTATACAGTACTGAGATATGCACTATCAAGCTTCTATGTGACGTAGGAAGAGAATATTTGGAATATATGACAATTTCTCAAAAGATCCACATAAACAAAAATGGTTTGAAGAGCAGAGAACTCATAAAGGAAACATCTACTTTTTGTTGTTCTGAAGCAGAATCTAGATTTGAACTCTTGTTTCAATTTGGGAGCTGGTTAAGTTTTACTTTCTCTTTGGGTGTCGTCTATAAGGCTTATTGTAATTACTAGTTAGGACGCATATCATTTGATTCTTAGACCCCATTTTGTCGAGCTCGTTTTTTGTATATCCCTGGTACGTTTTTTCATTTCTTCTCAAGCATGGTTTCTTATTAAAGAAAAAGAAATTCGAAACTCTTGTTCCAATAGTTGTATATATAGCTGGGGAGGATGGGAGATAGGGAGGAAGGGAGAAAGATAGAGGGGGAGGGGAGGGGAGGGGAGGATATCTTCAATATATGTGAATGATTTCAAACCTTCCATGTTATTCCTTTCTTATTCATTCTTGGATTTGGATATCTTCAATATATGTAAACGATTTTCTTTTTCCCTTTCCCATTACCTTGTTGCTATGTTTTAAGTAGTTCATGCCTGTCTGTTGCAATACCAGGTGGTAAATCATTGAATTTGGAATGGGAGATACGAAGGTTGATGGTAAACTGACAAGGATGGTGTTTGTTACTGTGGGAACAACGTGTTTTGATGCTTTGGTTAGGGCGGTGGACACTGAGCAAGTAAAACAAAAATTATATGCTAGAGGCTATACCCACCTTCTCATTCAAATGGGACGTGGTACATATAATCCAACCAAGGTATTTTCTGTGTATCATTTGATTTGATATGGTGTAGGTGAGAAAAAAGACTAGCCCGAATCTAAAAGGAGCTAAAAACTACAAAAAAGAGCCTCTGATTGTTAAGAATCAATATTTTACAAAATTATAGAAGAATTGTCTTATAATCCAATTTCCGAAGGAAGACATTAAAATATTCCGAACTCTTAACCTCCTCTCAATAACCTCTACACCGTTCTATTTTTTTCCAATCAAAATTCTACAAAATAGCATTGAGGCTTGAAAGAAAGAGATTCCAAACAATTCTGGCCTTCTTCTATTCAGCTTCGGCTCACACCTTGAACTTTGATTTTATGTCAATGTTGTGTATATAATAAAAAGGAATCGACTTTTTTTATCTAAAAGTTTAAGGTGATCTATGATTCAACGTCAACTTCTCAGTTAAATACTTTTGTGCAGTCTCATGGAGAAGATGGGCTTGTTGTAGACTATTTCTCTTTCTCATCAAGCATAGCAGATCATCTAAAGTCAGCTTCTCTTGTAATTAGCCATGCTGGTAAGACTTTTTAAGTTGCTGCTTTACACTTTGTTGTCCACAGAATGTGAATTCAAAAATACTATTTTGTCTCCATGCAGCCATGCTGTATCTGGTATCTCCTCATGCATGCTATGGATTATGATTGGTTATTATCATTCCTCGTAATTTGATCACCTGGTCCATATGTTACTATGACATGGATACACTGATATAGCTAATAACCCAAATTAATATGCTATTCAATACGAGAGAAAATATTGAATATTCAGTTTAATTTTGTAGGTTCTTGTCTTGGTAACATAGTATCTGTCTATTTCCTTTTTTGATAGGATTTATCATTTATCTATCAAATTCTGAGTTCCCTTGATTCAACAATTAGCATTTATGTAGAACCCACTATAGTGGATTGAAACCAACTATGGTGCATTGAAACCTTGGGGGAAACCTGCTTGCTTGTAAGCTTCATCTTTGGTAAATTCCATCTCCTACTTCTAATCTTCTGTGCCTTATCTAGACTAAAATTCATTCAAATTTTCTGTCACATTCAAATGAATGAGCTTAATTATATGTCTGACTTAAAAAGTTCTAATTGTTGAGGTTTATATCTATTTCATGAGTTAAATATGGAAATTTTGATTTTTGGATGTTCTTTTTGGATAAGAAACATTTTCATTGATAAGATGAAACTACAAAATGCAAAATGGGGGGGAAGCCAATCCCCAAACCAAGGGATGTTTTCAAAAAGCACCTCCAATTTGACAAAAGAGAAATCATACTGCTACTTTGAATTTGAGGTTAGTGAGTTCTGGAAATAGGATGGTTCCGGAAAGAATTTTTATCCAAACATTAATTGGTTGTGTATTAGGTATGACTGCTTTACCAATAGTTGAGACCCAATTGGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACCAATGGATAGATATTCTTATCTGCCGATCTATTCAATGCTGGACACCAAGTGAGAGCATTAATAAAACGATCATACATGTTCTTTTCCTCGACTATTTGGTTGTTCCTTTCATTCCATGCCACAAAAATGCCCTGATAAATTGGCTCCAAAGAATTTTCTTCTCTCTATTGAATGTGTATCCTTCAAGGACTAAAGATAGCATGCCGAGAGGATCCTTGGGAGGGATCAGATCCCAAAAATTAGCATGCGATGGTTAAAGAAAATATGGCTTTGTGATTCTGACTTTTCTTGCATAAAGAGAACCAGTTTGGGGAGATGGCCAGCCAAGAGGTTCTTTTTTGAGGTTATCATTGGTGTTAGAGCAAGAATGGTTAAGCTCCTAAAGGAAAATTTTGACCTTTTTCGGGTAATTTATCCTTCCAGATATTTCTGTAGAGGTGAGTGCTATTTGATTGACCCTAGCCCAAGGTCATGTGTAAGAGATCTTATAGAGAATGTACCACCACTGTCCAGCTTCAAACCAAAAGTCTCTATTCTGTGTGAGAAGTGAAAGGACAATAAAACATGGGGTAATGATGTCCACTCTTGAAACTCTGTAACTTGTTGGATGTTAACCTCTTTTCATCCTTCATTTCTCAATGTGGGAAAGACTGCATCGTTAAGAATTAATTATGTACTGGTATATCTTGGATAACTGTTGGCAAGGCCAGAGCCAGAAGTTTGATACGGAGGGCCAAAATATTACATTCTATATAGAATATTTAAATTCTAATAGTTATGGGGCAAACAGATGGGATGCTGTTGTAGTAAGCTTTTTTTTTTTCTTTTTTCTTTTTTGCTATTTTGTGGGTGTTGGGATCGAGAGGAAAAATATAATTTTTAGGGGTGGAGAGGCATTGGAGGAAAGTCTGGGATCTAGTTAGATTTAATACCTCTTTATGGGTGTTGGTTTCTAAGGTTTTTTGTAATAACCAGTTAGGTATATCATTATTTTGGATTGGTCCCCTCTTATAGGTAGATTCCCTTTTTTAATGGGCTAACCTTTTTATGTACCTTGCATTTTCTTCCATTTTCTTAGTGAAAGCTTATTATTAATATTATTTTTTAAAATCTTAATTCTTTAGTCTGACCAAACTTCGGGGAATTGCCCCCTCCTTTGTTCACGGCTTGATCCTTGACCATTGGTTCCAAATTTTGCAGGGTCCGGAAGTATATTTGAGACATTGAGACGCGGTAAACCTTTGATTGTAGTAGTGAATGAAGATCTAATGGACAATCATCAAATTGAACTTGCTGAAGAACTAGCTGAGCGGAAGCACTTGTATTGTGCTCGCCCCCAAGCACTACATCAAACTATAGAGGCCATGAATTTGGAGTCTCTCATTCCATACACACAAGGTGATGCTAAACCAGTAGGAAGGCTTATTAATAGGTTTCTGGGTTTTCCTGAAGATTAA

mRNA sequence

ATGCAGGTAAAAGATCTTCTTACATGCAAAAAGATACACAAGACTTTGGGAAAGAGACTAGCAGGGAAGAGCGAGTTGATGAAGTCGCATAAGCGAGAGAATGCATCGAGGGAGAAGACTACAGTGGGTATTGAAGTCAAAGGGAATATCTCTAGAAAGGCAACAGACTTGGGTGAGAGCTCCAAGTCATCAGAGGAATCTTCCTTCAGAGGGAGTTTGAACACAAGTGCTCAATTGTGTTGCAAAGACCATCCCGACTTTGGGGGCTGCAACCCAGACGATGGCAGTTCTTCTTTGAAAGCGGTAAGGTGCTGCCCTGGCTGCTTAGATTACTGTTACAGAGACCGCCGCCGGAGAGTGCTGTCGCGCCGCCTGGAGCTGCCGTCGCCGCCGTTAACCGCCGAACTGTTTCTGAAGGGGGCAGTATTCTCAATGGCGAAGAAGAGGAAGCATAGCGAGGCTTTGGCTTCGGTCGCGGTTAAGAAGGATAGCGACGCCCCCGAGAGACCCAAGCGGACGCTCATGGGATGGAAAGACAAAGAAGTGGGGAAAGAGAGCGAATCAGGTTCTGATCATGCAGTTTTTCGGAATAAAGAGAAGGTTCTCGTTACTTGCTCCCGCCGGATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTCTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGTAAGGGTGCAACACTAAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCTCTCTATTTTTTGAGTGCAGAAAACATAAAGATCTATATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTCTAGTTAATGCTGTGCATACAATGGAAGAATTGAAACTTACAGGGAACCATCTGAAGGGTTCTCGTCCAATTTTGACATTCTCGTCTAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATGATTGTTCAGATTTTTGGAATTCCGAAAGAGCATCGGCATTCTAAACCGTACCATGATCATGTATTTGTTTTCTCCATTGTTGACGATCATATATGGTTCCGAAATTACCAGATAGCTGTTCCACATAATGAATCAGCAGATAAAGTAGCCAGAGGAGGACTAGATAAAGTGACTCTTATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTACATATCGCCAAACCAGAATTATAAATTTGGCGGTATTTTAGTGGCCGCCTGCGGCTTGTTCCTCTCGCCGCCGCCGTACGCCGCCGCTCACCTCAACTGCCGTTCGTTGCGCCTATATTGTGAGAAAAGATCAGTCAGCGTTCGAGATCGCAAGAACAAGGATCCATATTCGCCGAACAGAAGCCAAAGCAACACTCGGGGAGCTGCAGCAGGTGGTAAATCATTGAATTTGGAATGGGAGATACGAAGGTTGATGTCTCATGGAGAAGATGGGCTTGTTGTAGACTATTTCTCTTTCTCATCAAGCATAGCAGATCATCTAAAGTCAGCTTCTCTTGTAATTAGCCATGCTGGGTCCGGAAGTATATTTGAGACATTGAGACGCGGTAAACCTTTGATTGTAGTAGTGAATGAAGATCTAATGGACAATCATCAAATTGAACTTGCTGAAGAACTAGCTGAGCGGAAGCACTTGTATTGTGCTCGCCCCCAAGCACTACATCAAACTATAGAGGCCATGAATTTGGAGTCTCTCATTCCATACACACAAGGTGATGCTAAACCAGTAGGAAGGCTTATTAATAGGTTTCTGGGTTTTCCTGAAGATTAA

Coding sequence (CDS)

ATGCAGGTAAAAGATCTTCTTACATGCAAAAAGATACACAAGACTTTGGGAAAGAGACTAGCAGGGAAGAGCGAGTTGATGAAGTCGCATAAGCGAGAGAATGCATCGAGGGAGAAGACTACAGTGGGTATTGAAGTCAAAGGGAATATCTCTAGAAAGGCAACAGACTTGGGTGAGAGCTCCAAGTCATCAGAGGAATCTTCCTTCAGAGGGAGTTTGAACACAAGTGCTCAATTGTGTTGCAAAGACCATCCCGACTTTGGGGGCTGCAACCCAGACGATGGCAGTTCTTCTTTGAAAGCGGTAAGGTGCTGCCCTGGCTGCTTAGATTACTGTTACAGAGACCGCCGCCGGAGAGTGCTGTCGCGCCGCCTGGAGCTGCCGTCGCCGCCGTTAACCGCCGAACTGTTTCTGAAGGGGGCAGTATTCTCAATGGCGAAGAAGAGGAAGCATAGCGAGGCTTTGGCTTCGGTCGCGGTTAAGAAGGATAGCGACGCCCCCGAGAGACCCAAGCGGACGCTCATGGGATGGAAAGACAAAGAAGTGGGGAAAGAGAGCGAATCAGGTTCTGATCATGCAGTTTTTCGGAATAAAGAGAAGGTTCTCGTTACTTGCTCCCGCCGGATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTCTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGTAAGGGTGCAACACTAAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCTCTCTATTTTTTGAGTGCAGAAAACATAAAGATCTATATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTCTAGTTAATGCTGTGCATACAATGGAAGAATTGAAACTTACAGGGAACCATCTGAAGGGTTCTCGTCCAATTTTGACATTCTCGTCTAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATGATTGTTCAGATTTTTGGAATTCCGAAAGAGCATCGGCATTCTAAACCGTACCATGATCATGTATTTGTTTTCTCCATTGTTGACGATCATATATGGTTCCGAAATTACCAGATAGCTGTTCCACATAATGAATCAGCAGATAAAGTAGCCAGAGGAGGACTAGATAAAGTGACTCTTATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTACATATCGCCAAACCAGAATTATAAATTTGGCGGTATTTTAGTGGCCGCCTGCGGCTTGTTCCTCTCGCCGCCGCCGTACGCCGCCGCTCACCTCAACTGCCGTTCGTTGCGCCTATATTGTGAGAAAAGATCAGTCAGCGTTCGAGATCGCAAGAACAAGGATCCATATTCGCCGAACAGAAGCCAAAGCAACACTCGGGGAGCTGCAGCAGGTGGTAAATCATTGAATTTGGAATGGGAGATACGAAGGTTGATGTCTCATGGAGAAGATGGGCTTGTTGTAGACTATTTCTCTTTCTCATCAAGCATAGCAGATCATCTAAAGTCAGCTTCTCTTGTAATTAGCCATGCTGGGTCCGGAAGTATATTTGAGACATTGAGACGCGGTAAACCTTTGATTGTAGTAGTGAATGAAGATCTAATGGACAATCATCAAATTGAACTTGCTGAAGAACTAGCTGAGCGGAAGCACTTGTATTGTGCTCGCCCCCAAGCACTACATCAAACTATAGAGGCCATGAATTTGGAGTCTCTCATTCCATACACACAAGGTGATGCTAAACCAGTAGGAAGGCTTATTAATAGGTTTCTGGGTTTTCCTGAAGATTAA

Protein sequence

MQVKDLLTCKKIHKTLGKRLAGKSELMKSHKRENASREKTTVGIEVKGNISRKATDLGESSKSSEESSFRGSLNTSAQLCCKDHPDFGGCNPDDGSSSLKAVRCCPGCLDYCYRDRRRRVLSRRLELPSPPLTAELFLKGAVFSMAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEMIVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQNYKFGGILVAACGLFLSPPPYAAAHLNCRSLRLYCEKRSVSVRDRKNKDPYSPNRSQSNTRGAAAGGKSLNLEWEIRRLMSHGEDGLVVDYFSFSSSIADHLKSASLVISHAGSGSIFETLRRGKPLIVVVNEDLMDNHQIELAEELAERKHLYCARPQALHQTIEAMNLESLIPYTQGDAKPVGRLINRFLGFPED

Homology

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BLAST of Moc06g34880 vs. NCBI nr
Match: XP_022159792.1 (ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia])

HSP 1 Score: 569.3 bits (1466), Expect = 4.0e-158
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI
Sbjct: 181 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 274

[Close]

BLAST of Moc06g34880 vs. NCBI nr
Match: XP_008450669.1 (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450671.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >TYK10224.1 ribosome biogenesis protein BRX1-like [Cucumis melo var. makuwa])

HSP 1 Score: 537.7 bits (1384), Expect = 1.3e-148
Identity = 257/274 (93.80%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           MAKKRKHSE + +V+VKKD +A ERPKRTLMGWKDKEV K+SE+GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           I+QIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKVARGGLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 273

[Close]

BLAST of Moc06g34880 vs. NCBI nr
Match: XP_011659901.2 (ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743378.1 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743380.1 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus])

HSP 1 Score: 537.7 bits (1384), Expect = 1.3e-148
Identity = 258/274 (94.16%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYL MAKCPSGPSVKFLVNA+HTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLCMAKCPSGPSVKFLVNAMHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           I+QIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKVARGGLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 273

[Close]

BLAST of Moc06g34880 vs. NCBI nr
Match: KAG6590497.1 (Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 536.2 bits (1380), Expect = 3.7e-148
Identity = 263/298 (88.26%), Postives = 272/298 (91.28%), Query Frame = 0


Query: 121 LSRRLELPSPPLTAELFLKGAVFSMAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDK 180
           LS + E    PLT  +   G  FSM KKRKHSE L +V+VKKD  APER KRTL GWKDK
Sbjct: 211 LSEQSETVVQPLTLGV---GVTFSMVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKDK 270

Query: 181 EVGKESESGSDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKG 240
           EV  +SES SDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRS+KG
Sbjct: 271 EVITKSESDSDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKG 330

Query: 241 ATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLK 300
           ATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLK
Sbjct: 331 ATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLK 390

Query: 301 GSRPILTFSSNFDKDVHWKLLKEMIVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNY 360
           GSRPILTFSSNFDKD HWKLLKE+IVQIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNY
Sbjct: 391 GSRPILTFSSNFDKDAHWKLLKEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNY 450

Query: 361 QIAVPHNESADKVARGGLDKVTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           QIAVPHNES DKVARGGLDK+TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 451 QIAVPHNES-DKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 504

[Close]

BLAST of Moc06g34880 vs. NCBI nr
Match: XP_038879963.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879964.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879966.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 535.0 bits (1377), Expect = 8.3e-148
Identity = 256/274 (93.43%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           MAKKRK SE L +V+ KKD +APERPKRTLMGWKD+EV KE E+GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKRSETLPTVSTKKDENAPERPKRTLMGWKDREVAKECEAGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLK SRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKSSRPILTFSSNFDKDVHWKLLKEI 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           IVQIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES DKVARGGLDK+TLI
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES-DKVARGGLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 273

[Close]

BLAST of Moc06g34880 vs. ExPASy Swiss-Prot
Match: Q9LE16 (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.8e-129
Identity = 220/274 (80.29%), Postives = 243/274 (88.69%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           M +KRKHSE + +  VK    APERP+RTL+GWKDK+   E+   +  +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKEM
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           + QIFGIP+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DK+ARG LDK+TLI
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKIARGDLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGG TLYENP Y+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQ 271

[Close]

BLAST of Moc06g34880 vs. ExPASy Swiss-Prot
Match: Q9C928 (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.7e-127
Identity = 218/276 (78.99%), Postives = 243/276 (88.04%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKK-DSDAPERPKRTLMGWKDKEVGK-ESESGSDHAVFRNKEKVL 204
           M +KRKHSE  A   VKK D  AP+RPKRTL+GWKDK  G+ E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 205 VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 264
           VTCSRRI+FRYR LMLN+VSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 265 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 324
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 325 EMIVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVT 384
           EM+ Q+FGIPKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNES DK+A+GGLDK+T
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNES-DKIAKGGLDKMT 240

Query: 385 LIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           LIEVGPRFCLNPIKIF GSFGGPTLYENPLY+SPNQ
Sbjct: 241 LIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQ 275

[Close]

BLAST of Moc06g34880 vs. ExPASy Swiss-Prot
Match: Q8UVY2 (Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis OX=8355 GN=brix1 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.8e-64
Identity = 117/235 (49.79%), Postives = 160/235 (68.09%), Query Frame = 0


Query: 195 FRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS 254
           ++NKE+VL+  SR INFR RHLM ++ SL+PH + + K++ R  K   +NE+ E+K C+ 
Sbjct: 49  WKNKERVLIFSSRGINFRTRHLMQDLRSLMPHSRAETKMD-RKDKLFVVNEVCEMKNCNK 108

Query: 255 SLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDK 314
            ++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK++GN LKGSRPIL+F   FD+
Sbjct: 109 CIYFEAKKKQDLYMWLSNSPEGPSAKFLVQNIHTLAELKMSGNCLKGSRPILSFDPAFDR 168

Query: 315 DVHWKLLKEMIVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVA 374
           +  + LLKE++ QIFG P+ H  S+P+ DH+F FSI D+ IWFRNYQI            
Sbjct: 169 EPQYALLKELLTQIFGTPRYHPRSQPFVDHIFTFSIADNRIWFRNYQIIE---------- 228

Query: 375 RGGLDKVTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQNYKFGGILVAA 430
               +   L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN + +   +  AA
Sbjct: 229 ----EDAALVEIGPRFVLNLIKIFKGSFGGPTLYENPHYQSPNMHRRMIRLATAA 268

[Close]

BLAST of Moc06g34880 vs. ExPASy Swiss-Prot
Match: Q4QQT6 (Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.0e-63
Identity = 129/290 (44.48%), Postives = 176/290 (60.69%), Query Frame = 0


Query: 147 KKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDH-------AVFRNKE 206
           K+R   E  A    K   DA +  K+        +V KE+E   D          ++NKE
Sbjct: 7   KRRGDLEVQAKKPKKNRKDAGQPAKQA-------DVAKEAEEEKDRIPGPVCKGKWKNKE 66

Query: 207 KVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFE 266
           ++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE
Sbjct: 67  RILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFE 126

Query: 267 CRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWK 326
            +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD   H+ 
Sbjct: 127 AKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDDLPHYA 186

Query: 327 LLKEMIVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLD 386
           LLKE ++QIF  P+ H  S+P+ DHVF F+I+D+ IWFRN+QI                +
Sbjct: 187 LLKEFLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIE--------------E 246

Query: 387 KVTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQNYKFGGILVAA 430
              L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN + +    + AA
Sbjct: 247 DAALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVVRSITAA 274

[Close]

BLAST of Moc06g34880 vs. ExPASy Swiss-Prot
Match: Q3SZZ0 (Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.9e-63
Identity = 129/288 (44.79%), Postives = 177/288 (61.46%), Query Frame = 0


Query: 146 AKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAV----FRNKEKV 205
           A KRK    LA  A K   DA +           +E  +E +      V    ++NKE++
Sbjct: 3   ATKRKRRGGLAVQAKKLKRDAKDGKLPAKANDVSEEAAEEEKDRIPGPVCKGKWKNKERI 62

Query: 206 LVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECR 265
           L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +
Sbjct: 63  LIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFEAK 122

Query: 266 KHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLL 325
           K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+  H+ LL
Sbjct: 123 KKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALL 182

Query: 326 KEMIVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKV 385
           KE+++QIF  P+ H  S+P+ DHVF F+I+D+ IWFRN+QI                +  
Sbjct: 183 KELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIE--------------EDA 242

Query: 386 TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQNYKFGGILVAA 430
            L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN + +    + AA
Sbjct: 243 ALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAA 275

[Close]

BLAST of Moc06g34880 vs. ExPASy TrEMBL
Match: A0A6J1E0T2 (ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111026105 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.9e-158
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI
Sbjct: 181 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 274

[Close]

BLAST of Moc06g34880 vs. ExPASy TrEMBL
Match: A0A1S3BQS3 (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.2e-149
Identity = 257/274 (93.80%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           MAKKRKHSE + +V+VKKD +A ERPKRTLMGWKDKEV K+SE+GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           I+QIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKVARGGLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 273

[Close]

BLAST of Moc06g34880 vs. ExPASy TrEMBL
Match: A0A5D3CG95 (Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003710 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.2e-149
Identity = 257/274 (93.80%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           MAKKRKHSE + +V+VKKD +A ERPKRTLMGWKDKEV K+SE+GSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           I+QIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKVARGGLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 273

[Close]

BLAST of Moc06g34880 vs. ExPASy TrEMBL
Match: A0A6J1EW75 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437121 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 2.6e-147
Identity = 254/274 (92.70%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           M KKRKHSE L  V+VKKD  APERPKRTL GWKDKEV KE+ESGSDHAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           IVQIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DKVARGGLDK+TLI
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKVARGGLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 273

[Close]

BLAST of Moc06g34880 vs. ExPASy TrEMBL
Match: A0A6J1HZ18 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467904 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 6.4e-146
Identity = 254/274 (92.70%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           M KKRKHSE L +V+VKKD  APER KRTL GWKDKEV  +SES SDHAVFRNKEKVLVT
Sbjct: 1   MVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKDKEVTTKSESDSDHAVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD HWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDAHWKLLKEI 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           IVQIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES DKVARGGLDK+TLI
Sbjct: 181 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES-DKVARGGLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQ 273

[Close]

BLAST of Moc06g34880 vs. TAIR 10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 464.5 bits (1194), Expect = 1.3e-130
Identity = 220/274 (80.29%), Postives = 243/274 (88.69%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 204
           M +KRKHSE + +  VK    APERP+RTL+GWKDK+   E+   +  +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 205 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 264
           CSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 265 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 324
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKEM
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 325 IVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVTLI 384
           + QIFGIP+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES DK+ARG LDK+TLI
Sbjct: 181 LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNES-DKIARGDLDKMTLI 240

Query: 385 EVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           EVGPRFCLNPIKIFGGSFGG TLYENP Y+SPNQ
Sbjct: 241 EVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQ 271

[Close]

BLAST of Moc06g34880 vs. TAIR 10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 458.0 bits (1177), Expect = 1.2e-128
Identity = 218/276 (78.99%), Postives = 243/276 (88.04%), Query Frame = 0


Query: 145 MAKKRKHSEALASVAVKK-DSDAPERPKRTLMGWKDKEVGK-ESESGSDHAVFRNKEKVL 204
           M +KRKHSE  A   VKK D  AP+RPKRTL+GWKDK  G+ E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 205 VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 264
           VTCSRRI+FRYR LMLN+VSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 265 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 324
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 325 EMIVQIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLDKVT 384
           EM+ Q+FGIPKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNES DK+A+GGLDK+T
Sbjct: 181 EMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNES-DKIAKGGLDKMT 240

Query: 385 LIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQ 419
           LIEVGPRFCLNPIKIF GSFGGPTLYENPLY+SPNQ
Sbjct: 241 LIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQ 275

[Close]

BLAST of Moc06g34880 vs. TAIR 10
Match: AT4G16710.1 (glycosyltransferase family protein 28 )

HSP 1 Score: 173.3 bits (438), Expect = 5.9e-43
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 501 GEDG-LVVDYFSFSSSIADHLKSASLVISHAGSGSIFETLRRGKPLIVVVNEDLMDNHQI 560
           G DG LVVDYF+FSSSIAD+++SASLVISHAGSGSIFETL+ GKPLIVVVNEDLMDNHQ 
Sbjct: 61  GADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQC 120

Query: 561 ELAEELAERKHLYCARPQALHQTIEAMNLESLIPYTQGDAKPVGRLINRFLGFPED 616
           ELAE L ERKHLY  RP +LHQT+  M L SL+ YT GD  PV R+I+RFLGFP+D
Sbjct: 121 ELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD 176

[Close]

BLAST of Moc06g34880 vs. TAIR 10
Match: AT4G16710.2 (glycosyltransferase family protein 28 )

HSP 1 Score: 173.3 bits (438), Expect = 5.9e-43
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 501 GEDG-LVVDYFSFSSSIADHLKSASLVISHAGSGSIFETLRRGKPLIVVVNEDLMDNHQI 560
           G DG LVVDYF+FSSSIAD+++SASLVISHAGSGSIFETL+ GKPLIVVVNEDLMDNHQ 
Sbjct: 61  GADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQC 120

Query: 561 ELAEELAERKHLYCARPQALHQTIEAMNLESLIPYTQGDAKPVGRLINRFLGFPED 616
           ELAE L ERKHLY  RP +LHQT+  M L SL+ YT GD  PV R+I+RFLGFP+D
Sbjct: 121 ELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD 176

The following BLAST results are available for this feature:

BLAST of Moc06g34880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159792.1	4.0e-158	100.00	ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia]	[more]
XP_008450669.1	1.3e-148	93.80	PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 ...	[more]
XP_011659901.2	1.3e-148	94.16	ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus] >XP_031743378.1 rib...	[more]
KAG6590497.1	3.7e-148	88.26	Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_038879963.1	8.3e-148	93.43	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_03887996...	[more]

BLAST of Moc06g34880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE16	1.8e-129	80.29	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q9C928	1.7e-127	78.99	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q8UVY2	7.8e-64	49.79	Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis OX=8355 GN=brix1 PE=2...	[more]
Q4QQT6	3.0e-63	44.48	Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 ...	[more]
Q3SZZ0	3.9e-63	44.79	Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=...	[more]

BLAST of Moc06g34880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0T2	1.9e-158	100.00	ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BQS3	6.2e-149	93.80	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
A0A5D3CG95	6.2e-149	93.80	Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1EW75	2.6e-147	92.70	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HZ18	6.4e-146	92.70	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Moc06g34880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15460.1	1.3e-130	80.29	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	1.2e-128	78.99	Ribosomal RNA processing Brix domain protein	[more]
AT4G16710.1	5.9e-43	75.00	glycosyltransferase family protein 28	[more]
AT4G16710.2	5.9e-43	75.00	glycosyltransferase family protein 28	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 202..397 e-value: 1.3E-50 score: 184.2
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 206..396 e-value: 2.7E-34 score: 119.0
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 199..403 score: 32.094372
IPR007235	Glycosyl transferase, family 28, C-terminal	PFAM	PF04101	Glyco_tran_28_C	coord: 500..599 e-value: 5.3E-22 score: 78.6
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 469..610 e-value: 4.1E-34 score: 120.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..483
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 145..418
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 200..400
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 507..577
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 145..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g34880.1	Moc06g34880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0016758	hexosyltransferase activity
molecular_function	GO:0019843	rRNA binding