Moc06g34710 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g34710
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	nuclear transcription factor Y subunit B-4-like
Location	chr6: 26324453 .. 26324872 (-)
RNA-Seq Expression	Moc06g34710
Synteny	Moc06g34710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGACGACAATTGGGAAAAGCTTCAGCTGCCAAGTGCTAACGTTGGAAGATTGATGAAGAAGATAATTCCTCAAACGTCAAAGATTTCTAAAGAAGCCAAACAGACAATGCAAGAATGTGCAACAGAGTTCATCAGCTTCGTGACAAGTGAAGCTGCAGAAAAGTGTAACAGAGAGAATCGTAGAACTCTCAACGGAGAAGACATTTATTGGGCTTTTGGTGCTCTTGGCTTGGATAACTATGCCGACGCTACCGCCAAGTACTTGCTCAACTACAGGGACGCCCAAACAATGAAGATTCATAACAAACATTGTGGATTTCAACAACAAGGAGAACATAACAACCATGACGACAACGGTGACGACGACGGGAAATTTTATCTGGCTAACAAGGGTGAAAGTTCTCAAACAAATTAG

mRNA sequence

ATGGGAGACGACAATTGGGAAAAGCTTCAGCTGCCAAGTGCTAACGTTGGAAGATTGATGAAGAAGATAATTCCTCAAACGTCAAAGATTTCTAAAGAAGCCAAACAGACAATGCAAGAATGTGCAACAGAGTTCATCAGCTTCGTGACAAGTGAAGCTGCAGAAAAGTGTAACAGAGAGAATCGTAGAACTCTCAACGGAGAAGACATTTATTGGGCTTTTGGTGCTCTTGGCTTGGATAACTATGCCGACGCTACCGCCAAGTACTTGCTCAACTACAGGGACGCCCAAACAATGAAGATTCATAACAAACATTGTGGATTTCAACAACAAGGAGAACATAACAACCATGACGACAACGGTGACGACGACGGGAAATTTTATCTGGCTAACAAGGGTGAAAGTTCTCAAACAAATTAG

Coding sequence (CDS)

ATGGGAGACGACAATTGGGAAAAGCTTCAGCTGCCAAGTGCTAACGTTGGAAGATTGATGAAGAAGATAATTCCTCAAACGTCAAAGATTTCTAAAGAAGCCAAACAGACAATGCAAGAATGTGCAACAGAGTTCATCAGCTTCGTGACAAGTGAAGCTGCAGAAAAGTGTAACAGAGAGAATCGTAGAACTCTCAACGGAGAAGACATTTATTGGGCTTTTGGTGCTCTTGGCTTGGATAACTATGCCGACGCTACCGCCAAGTACTTGCTCAACTACAGGGACGCCCAAACAATGAAGATTCATAACAAACATTGTGGATTTCAACAACAAGGAGAACATAACAACCATGACGACAACGGTGACGACGACGGGAAATTTTATCTGGCTAACAAGGGTGAAAGTTCTCAAACAAATTAG

Protein sequence

MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDNGDDDGKFYLANKGESSQTN

Homology

[Close]

BLAST of Moc06g34710 vs. NCBI nr
Match: XP_022145916.1 (nuclear transcription factor Y subunit B-4-like [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60
           MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE
Sbjct: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60

Query: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120
           NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN
Sbjct: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120

Query: 121 GDDDGKFYLANKGESSQTN 140
           GDDDGKFYLANKGESSQTN
Sbjct: 121 GDDDGKFYLANKGESSQTN 139

[Close]

BLAST of Moc06g34710 vs. NCBI nr
Match: XP_038880507.1 (nuclear transcription factor Y subunit B-4-like [Benincasa hispida])

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-36
Identity = 78/119 (65.55%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 4   DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRR 63
           +NWE LQLP ANVGR+MKKI+PQ +KISKEAK+TMQECA+EFISFV SEAAEKC++ENRR
Sbjct: 3   ENWENLQLPIANVGRIMKKILPQKAKISKEAKETMQECASEFISFVASEAAEKCHKENRR 62

Query: 64  TLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDNGD 123
           TLNG+DI WA G+ GLDNYA+ +AKYLL +R+A+ +K  NK   FQ   +    DDN +
Sbjct: 63  TLNGDDICWALGSCGLDNYAEVSAKYLLKFREAERIKTSNKAITFQHDHQQGEDDDNDE 121

[Close]

BLAST of Moc06g34710 vs. NCBI nr
Match: KAG6590402.1 (Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.4 bits (407), Expect = 5.7e-36
Identity = 84/136 (61.76%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60
           MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++
Sbjct: 1   MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKD 60

Query: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120
           NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +   N         E   HD  
Sbjct: 61  NRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDVERI---NAQFKTNIAPEQQKHDQE 120

Query: 121 GDDDGKFYLANKGESS 137
            + + +FY    GE+S
Sbjct: 121 QEQELEFYHGEIGETS 133

[Close]

BLAST of Moc06g34710 vs. NCBI nr
Match: XP_022961414.1 (nuclear transcription factor Y subunit B-4-like [Cucurbita moschata])

HSP 1 Score: 161.4 bits (407), Expect = 5.7e-36
Identity = 84/136 (61.76%), Postives = 104/136 (76.47%), Query Frame = 0


Query: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60
           MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++
Sbjct: 1   MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKD 60

Query: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120
           NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +    K     +Q +H      
Sbjct: 61  NRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDVERINAQFKTNIAPEQQKH------ 120

Query: 121 GDDDGKFYLANKGESS 137
            D + +FY    GE+S
Sbjct: 121 -DQELEFYHGEIGETS 129

[Close]

BLAST of Moc06g34710 vs. NCBI nr
Match: XP_023546470.1 (nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-35
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60
           MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++
Sbjct: 1   MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKD 60

Query: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120
           NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +    K     +Q  H+   + 
Sbjct: 61  NRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDVERINAQFKTNIAPEQQRHDQDQEQ 120

Query: 121 GDDDGKFYLANKGESSQ 138
             +  +    N GE+S+
Sbjct: 121 KQEQEQELEFNHGETSE 137

[Close]

BLAST of Moc06g34710 vs. ExPASy Swiss-Prot
Match: O04027 (Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana OX=3702 GN=NFYB4 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30
Identity = 76/131 (58.02%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANVGRLMK+I+P  +KISKEAKQT+QECATEFISFVT EA+EKC+RENR+T+NG+DI
Sbjct: 8   LPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDI 67

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQQQG---EHNNHDDNGDDDGK 130
           +WA   LGLDNYADA  ++L  YR+A+  +  HNK  G    G   E N   D  +   K
Sbjct: 68  WWALSTLGLDNYADAVGRHLHKYREAERERTEHNK--GSNDSGNEKETNTRSDVQNQSTK 127

Query: 131 FY-LANKGESS 137
           F  +  KG SS
Sbjct: 128 FIRVVEKGSSS 136

[Close]

BLAST of Moc06g34710 vs. ExPASy Swiss-Prot
Match: Q9SIT9 (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NFYB7 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.0e-25
Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANVGR+MKK++P   KISK+AK+T+QEC +EFISFVT EA++KC RE R+T+NG+DI
Sbjct: 41  LPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDI 100

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQTMKIHN--------KHCGFQQQGEHN 116
            WA   LG ++Y      YL  YRD +  K+++        +    QQQ  HN
Sbjct: 101 IWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPKQQQQRQQQQQIQQQNHHN 153

[Close]

BLAST of Moc06g34710 vs. ExPASy Swiss-Prot
Match: O82248 (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NFYB5 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANVGR+MK I+P  +K+SKEAK+TMQEC +EFISFVT EA++KC++E R+T+NG+DI
Sbjct: 56  LPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDI 115

Query: 71  YWAFGALGLDNYADATAKYLLNYR 95
            WA   LG D+YA    KYL  YR
Sbjct: 116 CWAMANLGFDDYAAQLKKYLHRYR 139

[Close]

BLAST of Moc06g34710 vs. ExPASy Swiss-Prot
Match: Q67XJ2 (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-23
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP AN+ R+MK+ +P   KI+K+AK+TMQEC +EFISFVTSEA++KC RE R+T+NG+D+
Sbjct: 34  LPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDL 93

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQ 98
            WA   LG ++Y D    YL+ YR+ +
Sbjct: 94  LWAMATLGFEDYIDPLKVYLMRYREME 120

[Close]

BLAST of Moc06g34710 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.5e-23
Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANV R+MKK +P  +KISK+AK+T+QEC +EFISF+T EA++KC RE R+T+NG+D+
Sbjct: 26  LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 85

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQTMK 101
            WA   LG ++Y +    YL  YR+ +  K
Sbjct: 86  LWAMTTLGFEDYVEPLKVYLQKYREVEGEK 115

[Close]

BLAST of Moc06g34710 vs. ExPASy TrEMBL
Match: A0A6J1CXT8 (nuclear transcription factor Y subunit B-4-like OS=Momordica charantia OX=3673 GN=LOC111015264 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 9.6e-74
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60
           MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE
Sbjct: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60

Query: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120
           NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN
Sbjct: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120

Query: 121 GDDDGKFYLANKGESSQTN 140
           GDDDGKFYLANKGESSQTN
Sbjct: 121 GDDDGKFYLANKGESSQTN 139

[Close]

BLAST of Moc06g34710 vs. ExPASy TrEMBL
Match: A0A6J1HDY6 (nuclear transcription factor Y subunit B-4-like OS=Cucurbita moschata OX=3662 GN=LOC111461996 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.7e-36
Identity = 84/136 (61.76%), Postives = 104/136 (76.47%), Query Frame = 0


Query: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60
           MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++
Sbjct: 1   MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKD 60

Query: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDN 120
           NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +    K     +Q +H      
Sbjct: 61  NRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDVERINAQFKTNIAPEQQKH------ 120

Query: 121 GDDDGKFYLANKGESS 137
            D + +FY    GE+S
Sbjct: 121 -DQELEFYHGEIGETS 129

[Close]

BLAST of Moc06g34710 vs. ExPASy TrEMBL
Match: A0A6J1HUN8 (nuclear transcription factor Y subunit B-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467987 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 84/143 (58.74%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 1   MGDDNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRE 60
           MG++N ++LQLP ANVGRLMKKI+PQ +KISKEAK TMQECATEFISFVTSEAAEKC+++
Sbjct: 1   MGENNGDELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKD 60

Query: 61  NRRTLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEH------ 120
           NRRTLNG+DI WAFG+ GLDNYA+A+AKYLL YRD + +    K    ++Q EH      
Sbjct: 61  NRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINAQFKTNIAREQQEHGQEREQ 120

Query: 121 -NNHDDNGDDDGKFYLANKGESS 137
               +   + + +FY    GE+S
Sbjct: 121 EQEQEQEQEQELEFYHGEIGETS 143

[Close]

BLAST of Moc06g34710 vs. ExPASy TrEMBL
Match: A0A1S3BQ87 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 8.8e-35
Identity = 81/130 (62.31%), Postives = 100/130 (76.92%), Query Frame = 0


Query: 4   DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRR 63
           +NWE LQLP ANV R+MKKIIPQ  KISKEAK+TMQECA EFISFVTSEAA+KC+ ENRR
Sbjct: 3   ENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRR 62

Query: 64  TLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDNGDD 123
           TLNG+DIYWAFG+LGLDNYA+A++  LL +R+A+ +K  +K   FQ    H+ H    D 
Sbjct: 63  TLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKASDKAITFQ----HHQHGVE-DH 122

Query: 124 DGKFYLANKG 134
           D  F+  ++G
Sbjct: 123 DSFFFEVSQG 127

[Close]

BLAST of Moc06g34710 vs. ExPASy TrEMBL
Match: A0A5D3CFV4 (Beta-galactosidase 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003870 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.5e-34
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 4   DNWEKLQLPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRR 63
           +NWE LQLP ANV R+MKKIIPQ  KISKEAK+TMQECA EFISFVTSEAA+KC+ ENRR
Sbjct: 3   ENWESLQLPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQKCHNENRR 62

Query: 64  TLNGEDIYWAFGALGLDNYADATAKYLLNYRDAQTMKIHNKHCGFQQQGEHNNHDDNGDD 123
           TLNG+DIYWAFG+LGLDNYA+A++  LL +R+A+ +K  +K   FQ       H  +G +
Sbjct: 63  TLNGDDIYWAFGSLGLDNYAEASSMLLLKFREAERIKASDKAITFQ-------HHQHGVE 119

Query: 124 DGKF 128
           D ++
Sbjct: 123 DHEY 119

[Close]

BLAST of Moc06g34710 vs. TAIR 10
Match: AT1G09030.1 (nuclear factor Y, subunit B4 )

HSP 1 Score: 134.0 bits (336), Expect = 9.0e-32
Identity = 76/131 (58.02%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANVGRLMK+I+P  +KISKEAKQT+QECATEFISFVT EA+EKC+RENR+T+NG+DI
Sbjct: 8   LPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDI 67

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQTMKI-HNKHCGFQQQG---EHNNHDDNGDDDGK 130
           +WA   LGLDNYADA  ++L  YR+A+  +  HNK  G    G   E N   D  +   K
Sbjct: 68  WWALSTLGLDNYADAVGRHLHKYREAERERTEHNK--GSNDSGNEKETNTRSDVQNQSTK 127

Query: 131 FY-LANKGESS 137
           F  +  KG SS
Sbjct: 128 FIRVVEKGSSS 136

[Close]

BLAST of Moc06g34710 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 114.8 bits (286), Expect = 5.7e-26
Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANVGR+MKK++P   KISK+AK+T+QEC +EFISFVT EA++KC RE R+T+NG+DI
Sbjct: 41  LPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDI 100

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQTMKIHN--------KHCGFQQQGEHN 116
            WA   LG ++Y      YL  YRD +  K+++        +    QQQ  HN
Sbjct: 101 IWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPKQQQQRQQQQQIQQQNHHN 153

[Close]

BLAST of Moc06g34710 vs. TAIR 10
Match: AT2G47810.1 (nuclear factor Y, subunit B5 )

HSP 1 Score: 114.0 bits (284), Expect = 9.7e-26
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANVGR+MK I+P  +K+SKEAK+TMQEC +EFISFVT EA++KC++E R+T+NG+DI
Sbjct: 56  LPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDI 115

Query: 71  YWAFGALGLDNYADATAKYLLNYR 95
            WA   LG D+YA    KYL  YR
Sbjct: 116 CWAMANLGFDDYAAQLKKYLHRYR 139

[Close]

BLAST of Moc06g34710 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-24
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP AN+ R+MK+ +P   KI+K+AK+TMQEC +EFISFVTSEA++KC RE R+T+NG+D+
Sbjct: 34  LPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDL 93

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQ 98
            WA   LG ++Y D    YL+ YR+ +
Sbjct: 94  LWAMATLGFEDYIDPLKVYLMRYREME 120

[Close]

BLAST of Moc06g34710 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-24
Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 11  LPSANVGRLMKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDI 70
           LP ANV R+MKK +P  +KISK+AK+T+QEC +EFISF+T EA++KC RE R+T+NG+D+
Sbjct: 26  LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 85

Query: 71  YWAFGALGLDNYADATAKYLLNYRDAQTMK 101
            WA   LG ++Y +    YL  YR+ +  K
Sbjct: 86  LWAMTTLGFEDYVEPLKVYLQKYREVEGEK 115

The following BLAST results are available for this feature:

BLAST of Moc06g34710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145916.1	2.0e-73	100.00	nuclear transcription factor Y subunit B-4-like [Momordica charantia]	[more]
XP_038880507.1	1.5e-36	65.55	nuclear transcription factor Y subunit B-4-like [Benincasa hispida]	[more]
KAG6590402.1	5.7e-36	61.76	Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subs...	[more]
XP_022961414.1	5.7e-36	61.76	nuclear transcription factor Y subunit B-4-like [Cucurbita moschata]	[more]
XP_023546470.1	1.3e-35	59.85	nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc06g34710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04027	1.3e-30	58.02	Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SIT9	8.0e-25	49.56	Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O82248	1.4e-24	61.90	Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q67XJ2	3.3e-23	54.02	Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
O23310	7.5e-23	52.22	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Moc06g34710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXT8	9.6e-74	100.00	nuclear transcription factor Y subunit B-4-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1HDY6	2.7e-36	61.76	nuclear transcription factor Y subunit B-4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HUN8	1.4e-35	58.74	nuclear transcription factor Y subunit B-4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BQ87	8.8e-35	62.31	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1	[more]
A0A5D3CFV4	1.5e-34	62.90	Beta-galactosidase 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Moc06g34710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09030.1	9.0e-32	58.02	nuclear factor Y, subunit B4	[more]
AT2G13570.1	5.7e-26	49.56	nuclear factor Y, subunit B7	[more]
AT2G47810.1	9.7e-26	61.90	nuclear factor Y, subunit B5	[more]
AT3G53340.1	2.4e-24	54.02	nuclear factor Y, subunit B10	[more]
AT4G14540.1	5.3e-24	52.22	nuclear factor Y, subunit B3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 38..56 score: 50.6 coord: 57..75 score: 30.26 coord: 76..94 score: 24.04
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..129
None	No IPR available	PANTHER	PTHR11064:SF83	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4	coord: 3..120
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 10..73 e-value: 1.6E-24 score: 85.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 3..137 e-value: 3.4E-36 score: 126.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 8..126
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 3..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g34710.1	Moc06g34710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding