Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGGCAAATAGTAGAATTTAGAACACCCCAGCACCCTTCTGTGGGCAAAAACAACTGGGGTGGAGCTTCTCCTTTGCTAGCCAGAAACATACCCCATGAGACTCTAGAACTGAGGTACCTCAACCTCAATTCCTCTCGTACTCGAGACGAAATCTTTCCTCTGCAAGGCGATGACGACGATTCCAGCTACTACTTGCCCGTCTCGTACACACCTCGACTGCAGCGTCTTGAAAAGTCGGAGAATATGAAAAGGAGTTCATTTTTGTCAAAGTTATCCTTGCCCTGGAGAGGGAAGAAAACATTTTTGGGCTCCAACTCAAGGAAGAAATGGTTCACGAGATGGGATTATCAGAACAGGTGGCCTCAGGGCTGGTGCTGA
mRNA sequence
ATGAGGAGGCAAATAGTAGAATTTAGAACACCCCAGCACCCTTCTGTGGGCAAAAACAACTGGGGTGGAGCTTCTCCTTTGCTAGCCAGAAACATACCCCATGAGACTCTAGAACTGAGGTACCTCAACCTCAATTCCTCTCGTACTCGAGACGAAATCTTTCCTCTGCAAGGCGATGACGACGATTCCAGCTACTACTTGCCCGTCTCGTACACACCTCGACTGCAGCGTCTTGAAAAGTCGGAGAATATGAAAAGGAGTTCATTTTTGTCAAAGTTATCCTTGCCCTGGAGAGGGAAGAAAACATTTTTGGGCTCCAACTCAAGGAAGAAATGGTTCACGAGATGGGATTATCAGAACAGGTGGCCTCAGGGCTGGTGCTGA
Coding sequence (CDS)
ATGAGGAGGCAAATAGTAGAATTTAGAACACCCCAGCACCCTTCTGTGGGCAAAAACAACTGGGGTGGAGCTTCTCCTTTGCTAGCCAGAAACATACCCCATGAGACTCTAGAACTGAGGTACCTCAACCTCAATTCCTCTCGTACTCGAGACGAAATCTTTCCTCTGCAAGGCGATGACGACGATTCCAGCTACTACTTGCCCGTCTCGTACACACCTCGACTGCAGCGTCTTGAAAAGTCGGAGAATATGAAAAGGAGTTCATTTTTGTCAAAGTTATCCTTGCCCTGGAGAGGGAAGAAAACATTTTTGGGCTCCAACTCAAGGAAGAAATGGTTCACGAGATGGGATTATCAGAACAGGTGGCCTCAGGGCTGGTGCTGA
Protein sequence
MRRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDDSSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKKTFLGSNSRKKWFTRWDYQNRWPQGWC
Homology
BLAST of Moc06g34440 vs. NCBI nr
Match:
TYK20514.1 (hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa])
HSP 1 Score: 221.1 bits (562), Expect = 5.5e-54
Identity = 102/126 (80.95%), Postives = 115/126 (91.27%), Query Frame = 0
Query: 7 EFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD---- 66
EFRTPQHPS+GKNNWGGASPLLARNIPHET+ELRYL LN+SRTRDEIFPLQ D+DD
Sbjct: 99 EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNTSRTRDEIFPLQEDEDDDEVS 158
Query: 67 SSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKK-TFLGSNSRKKWFTRWDYQNR 126
+YYLPVSYTPRLQRLEK++ +K++SFLSKLSLPW+GK+ T LGSNSRKKWF +WDYQNR
Sbjct: 159 DNYYLPVSYTPRLQRLEKTKYVKKNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQNR 218
Query: 127 WPQGWC 128
WPQGWC
Sbjct: 219 WPQGWC 224
BLAST of Moc06g34440 vs. NCBI nr
Match:
KAG6571514.1 (hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 214.9 bits (546), Expect = 3.9e-52
Identity = 103/126 (81.75%), Postives = 109/126 (86.51%), Query Frame = 0
Query: 3 RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD 62
R I+EFRTPQHPS+ KNNWGGASPLLARNIPH+TLELRYL LNS+RTRDEIFPL +DD
Sbjct: 2 RPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLL-EDDQ 61
Query: 63 SSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGK-KTFLGSNSRKKWFTRWDYQNR 122
SYYLPVSY PRLQRLEKS +K SSFLSKLSLPWRGK KT G NSRKKWF WDYQNR
Sbjct: 62 HSYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNR 121
Query: 123 WPQGWC 128
WPQGWC
Sbjct: 122 WPQGWC 126
BLAST of Moc06g34440 vs. NCBI nr
Match:
KGN57931.1 (hypothetical protein Csa_009875 [Cucumis sativus])
HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 98/127 (77.17%), Postives = 114/127 (89.76%), Query Frame = 0
Query: 3 RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD 62
R IVEFRTPQHPS GKNNWGGASPLLARNIPHETLELRYL LN++RTRDEIFPLQ D+ D
Sbjct: 2 RHIVEFRTPQHPSFGKNNWGGASPLLARNIPHETLELRYLKLNTTRTRDEIFPLQEDEVD 61
Query: 63 SSYYLPVSYTPRLQR-LEKSENMKRSSFLSKLSLPWRGKK-TFLGSNSRKKWFTRWDYQN 122
+YYLP+SYT +LQ+ +K++ ++R+SFLSKLSLPW+GK+ T LGSNSRKKWF +WDYQN
Sbjct: 62 DNYYLPISYTTQLQQHFKKTKYVERNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQN 121
Query: 123 RWPQGWC 128
RWPQGWC
Sbjct: 122 RWPQGWC 128
BLAST of Moc06g34440 vs. NCBI nr
Match:
KAF3436171.1 (hypothetical protein FNV43_RR23263 [Rhamnella rubrinervis])
HSP 1 Score: 141.7 bits (356), Expect = 4.2e-30
Identity = 70/127 (55.12%), Postives = 84/127 (66.14%), Query Frame = 0
Query: 2 RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDD 61
R +VEFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS RTRDEI P+ DDD
Sbjct: 4 RELVVEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLKLNSVRTRDEICPIPDDDD 63
Query: 62 DSSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKKTFLGSNSRK--KWFTRWDYQ 121
D ++ V+ + + + L KL P +GK +GSN+RK W RWD Q
Sbjct: 64 DDGHFNYVNAAEKHEYHTAPSRNRNRGLLWKLLFPRKGKTREVGSNARKGSSWLPRWDPQ 123
Query: 122 NRWPQGW 127
NRWPQGW
Sbjct: 124 NRWPQGW 130
BLAST of Moc06g34440 vs. NCBI nr
Match:
TYI75034.1 (hypothetical protein E1A91_D07G246700v1 [Gossypium mustelinum])
HSP 1 Score: 140.2 bits (352), Expect = 1.2e-29
Identity = 67/126 (53.17%), Postives = 86/126 (68.25%), Query Frame = 0
Query: 2 RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDD 61
+R+++EFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS R RDEIFP + D
Sbjct: 3 QRELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSMRNRDEIFPAKADHF 62
Query: 62 DSSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKKTFLGSNSRKKWFTRWDYQNR 121
+ + P Q + + + FLSKL PW+ T ++SR++WF RWD +NR
Sbjct: 63 NCN--TPTQAAKHGQ--APTPSRRGRGFLSKLMFPWKETATLGANSSRRRWFPRWDPKNR 122
Query: 122 WPQGWC 128
WPQGWC
Sbjct: 123 WPQGWC 124
BLAST of Moc06g34440 vs. ExPASy TrEMBL
Match:
A0A5D3DAH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00890 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 2.7e-54
Identity = 102/126 (80.95%), Postives = 115/126 (91.27%), Query Frame = 0
Query: 7 EFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD---- 66
EFRTPQHPS+GKNNWGGASPLLARNIPHET+ELRYL LN+SRTRDEIFPLQ D+DD
Sbjct: 99 EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNTSRTRDEIFPLQEDEDDDEVS 158
Query: 67 SSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKK-TFLGSNSRKKWFTRWDYQNR 126
+YYLPVSYTPRLQRLEK++ +K++SFLSKLSLPW+GK+ T LGSNSRKKWF +WDYQNR
Sbjct: 159 DNYYLPVSYTPRLQRLEKTKYVKKNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQNR 218
Query: 127 WPQGWC 128
WPQGWC
Sbjct: 219 WPQGWC 224
BLAST of Moc06g34440 vs. ExPASy TrEMBL
Match:
A0A0A0LCZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395420 PE=4 SV=1)
HSP 1 Score: 213.0 bits (541), Expect = 7.3e-52
Identity = 98/127 (77.17%), Postives = 114/127 (89.76%), Query Frame = 0
Query: 3 RQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDDD 62
R IVEFRTPQHPS GKNNWGGASPLLARNIPHETLELRYL LN++RTRDEIFPLQ D+ D
Sbjct: 2 RHIVEFRTPQHPSFGKNNWGGASPLLARNIPHETLELRYLKLNTTRTRDEIFPLQEDEVD 61
Query: 63 SSYYLPVSYTPRLQR-LEKSENMKRSSFLSKLSLPWRGKK-TFLGSNSRKKWFTRWDYQN 122
+YYLP+SYT +LQ+ +K++ ++R+SFLSKLSLPW+GK+ T LGSNSRKKWF +WDYQN
Sbjct: 62 DNYYLPISYTTQLQQHFKKTKYVERNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQN 121
Query: 123 RWPQGWC 128
RWPQGWC
Sbjct: 122 RWPQGWC 128
BLAST of Moc06g34440 vs. ExPASy TrEMBL
Match:
A0A5D2UEN6 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D07G246700v1 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 6.0e-30
Identity = 67/126 (53.17%), Postives = 86/126 (68.25%), Query Frame = 0
Query: 2 RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDD 61
+R+++EFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS R RDEIFP + D
Sbjct: 3 QRELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSMRNRDEIFPAKADHF 62
Query: 62 DSSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKKTFLGSNSRKKWFTRWDYQNR 121
+ + P Q + + + FLSKL PW+ T ++SR++WF RWD +NR
Sbjct: 63 NCN--TPTQAAKHGQ--APTPSRRGRGFLSKLMFPWKETATLGANSSRRRWFPRWDPKNR 122
Query: 122 WPQGWC 128
WPQGWC
Sbjct: 123 WPQGWC 124
BLAST of Moc06g34440 vs. ExPASy TrEMBL
Match:
A0A2C9UNI5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G032700 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 7.8e-30
Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 0
Query: 2 RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDD 61
+R++++FRTPQHPS G N+WGGASPLLARNIP E+L+ RY LN+ R RDEIFP Q D+
Sbjct: 3 QRELLQFRTPQHPSQGTNSWGGASPLLARNIPKESLDQRYSRLNTVRIRDEIFPYQADE- 62
Query: 62 DSSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKKTFLGSNSRKKWFTRWDYQNR 121
Y+ P + Q R L +L P + + LGSNS+K+WF RWD +NR
Sbjct: 63 --LYFSPQVHASPYQFPPNPSRSSRRGLLFRLKFPRKERTVSLGSNSKKRWFPRWDPKNR 122
Query: 122 WPQGWC 128
WPQGWC
Sbjct: 123 WPQGWC 125
BLAST of Moc06g34440 vs. ExPASy TrEMBL
Match:
A0A7J9IKX3 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_019241 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.0e-29
Identity = 67/126 (53.17%), Postives = 85/126 (67.46%), Query Frame = 0
Query: 2 RRQIVEFRTPQHPSVGKNNWGGASPLLARNIPHETLELRYLNLNSSRTRDEIFPLQGDDD 61
+R+++EFRTPQHPS+G NNWGGASPLLAR+IP E+LE RYL LNS R RDEIFP D
Sbjct: 3 QRELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSIRNRDEIFPANADHF 62
Query: 62 DSSYYLPVSYTPRLQRLEKSENMKRSSFLSKLSLPWRGKKTFLGSNSRKKWFTRWDYQNR 121
+ + P Q + + + FLSKL PW+ T ++SR++WF RWD +NR
Sbjct: 63 NCN--TPTQAAKHGQ--APTPSRRGRGFLSKLMFPWKETATLGANSSRRRWFPRWDPKNR 122
Query: 122 WPQGWC 128
WPQGWC
Sbjct: 123 WPQGWC 124
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK20514.1 | 5.5e-54 | 80.95 | hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa] | [more] |
| KAG6571514.1 | 3.9e-52 | 81.75 | hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KGN57931.1 | 1.5e-51 | 77.17 | hypothetical protein Csa_009875 [Cucumis sativus] | [more] |
| KAF3436171.1 | 4.2e-30 | 55.12 | hypothetical protein FNV43_RR23263 [Rhamnella rubrinervis] | [more] |
| TYI75034.1 | 1.2e-29 | 53.17 | hypothetical protein E1A91_D07G246700v1 [Gossypium mustelinum] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DAH9 | 2.7e-54 | 80.95 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LCZ1 | 7.3e-52 | 77.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395420 PE=4 SV=1 | [more] |
| A0A5D2UEN6 | 6.0e-30 | 53.17 | Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D07G246700v1 P... | [more] |
| A0A2C9UNI5 | 7.8e-30 | 51.59 | Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G032700 PE=4 SV=... | [more] |
| A0A7J9IKX3 | 1.0e-29 | 53.17 | Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_019241 PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
