Moc06g33650 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g33650
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr6: 25501565 .. 25502115 (-)
RNA-Seq Expression	Moc06g33650
Synteny	Moc06g33650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCCCAATGGCCTTCATCAGTAAGTTCAAGCCAGCTTCATTCCCCCGATATCCGTTACAAGCCTCCTTCTCGCCGTCATCCGTTAAAAAGTTACGTGCTGAAGAAACCCTAAAGGGGCCGAGTGACTATAGGGAGAGAGGTGAACAAACCCTAGATGTAGGCAAAATAGAGAATAGTGACTTGTACTAAGGGATTTCGTTCATTGAATTGACTTTGGCATCGGAGCCCGTGTGACTAGGGTTGCCTGATTTAGTCTAATTTGAATTTTGTAGATTCCCAATTATCGAAATTGTTGCAAATCCCGAGGCAATATCTATCAGAATCTTAAACACATCAAAAATCGGCACCGTCTGTGGGGACGTGTAATCATACAACCAATCATGACACCGGAGAAAAGTCCACAACTTTCTGACGGCGATTGTCATCCAAGAAGGAGGCTAAACATGGATGACCCTCAACTAGGAGGAGCTGGAGACGGAACGAGCCGACTGGAAGGCCGAGAACTGCTCGAGATCCCTGTTACTGCCGTCCTGGAGCAACTCTAG

mRNA sequence

ATGGCGTTCCCAATGGCCTTCATCAGTAAGTTCAAGCCAGCTTCATTCCCCCGATATCCGTTACAAGCCTCCTTCTCGCCGTCATCCGTTAAAAAGTTACGTGCTGAAGAAACCCTAAAGGGGCCGAGTGACTATAGGGAGAGAGGTGAACAAACCCTAGATATTCCCAATTATCGAAATTGTTGCAAATCCCGAGGCAATATCTATCAGAATCTTAAACACATCAAAAATCGGCACCGTCTGTGGGGACGTGTAATCATACAACCAATCATGACACCGGAGAAAAGTCCACAACTTTCTGACGGCGATTGTCATCCAAGAAGGAGGCTAAACATGGATGACCCTCAACTAGGAGGAGCTGGAGACGGAACGAGCCGACTGGAAGGCCGAGAACTGCTCGAGATCCCTGTTACTGCCGTCCTGGAGCAACTCTAG

Coding sequence (CDS)

ATGGCGTTCCCAATGGCCTTCATCAGTAAGTTCAAGCCAGCTTCATTCCCCCGATATCCGTTACAAGCCTCCTTCTCGCCGTCATCCGTTAAAAAGTTACGTGCTGAAGAAACCCTAAAGGGGCCGAGTGACTATAGGGAGAGAGGTGAACAAACCCTAGATATTCCCAATTATCGAAATTGTTGCAAATCCCGAGGCAATATCTATCAGAATCTTAAACACATCAAAAATCGGCACCGTCTGTGGGGACGTGTAATCATACAACCAATCATGACACCGGAGAAAAGTCCACAACTTTCTGACGGCGATTGTCATCCAAGAAGGAGGCTAAACATGGATGACCCTCAACTAGGAGGAGCTGGAGACGGAACGAGCCGACTGGAAGGCCGAGAACTGCTCGAGATCCCTGTTACTGCCGTCCTGGAGCAACTCTAG

Protein sequence

MAFPMAFISKFKPASFPRYPLQASFSPSSVKKLRAEETLKGPSDYRERGEQTLDIPNYRNCCKSRGNIYQNLKHIKNRHRLWGRVIIQPIMTPEKSPQLSDGDCHPRRRLNMDDPQLGGAGDGTSRLEGRELLEIPVTAVLEQL

Homology

[Close]

BLAST of Moc06g33650 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-04
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 91  MTPEKSPQLSDGDCHPRRRLNMDDPQLGGAGDGTSR 127
           MTPE+SP+ SD +C  +RRLN+DDPQ+GG  DGTS+
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQ 36

[Close]

BLAST of Moc06g33650 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 91  MTPEKSPQLSDGDCHPRRRLNMDDPQLGGAGDGTSR 127
           MTPE+SP+ SD +C  +RRLN+DDPQ+GG  DGTS+
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQ 36

[Close]

BLAST of Moc06g33650 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.9e-04
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 91  MTPEKSPQLSDGDCHPRRRLNMDDPQLGGAGDGTSR 127
           MTPE+SP+ SD DC  +RRLN+ DPQ+GG  DGTS+
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQ 36

The following BLAST results are available for this feature:

BLAST of Moc06g33650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145129.1	5.9e-04	63.89	uncharacterized protein LOC111014646 [Momordica charantia]	[more]

BLAST of Moc06g33650 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g33650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUA7	2.9e-04	63.89	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DWY0	4.9e-04	63.89	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc06g33650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g33650.1	Moc06g33650.1	mRNA