Moc06g33400 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g33400
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Nucleotide-sugar transporter
Location	chr6: 25339007 .. 25339231 (-)
RNA-Seq Expression	Moc06g33400
Synteny	Moc06g33400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGTGGGGTGGAGCAGCAGCAGCAGCGAGTGAGCAAGCAGTTTCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAAGAGTGACTATGAGGCCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGATAGTCGGAGACGTCGCCCAGAAGCGGAAGTTTGCCATGGGAGCCTTCCTCTGGCCTTGTGATCAATATTGA

mRNA sequence

ATGATGGGTGGGGTGGAGCAGCAGCAGCAGCGAGTGAGCAAGCAGTTTCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAAGAGTGACTATGAGGCCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGATAGTCGGAGACGTCGCCCAGAAGCGGAAGTTTGCCATGGGAGCCTTCCTCTGGCCTTGTGATCAATATTGA

Coding sequence (CDS)

ATGATGGGTGGGGTGGAGCAGCAGCAGCAGCGAGTGAGCAAGCAGTTTCATCAGTTTCAGATGCCTCTTCACTACCCAAGGTACAAGAAGAGTGACTATGAGGCCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGATAGTCGGAGACGTCGCCCAGAAGCGGAAGTTTGCCATGGGAGCCTTCCTCTGGCCTTGTGATCAATATTGA

Protein sequence

MMGGVEQQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGAFLWPCDQY

Homology

[Close]

BLAST of Moc06g33400 vs. NCBI nr
Match: XP_022146008.1 (uncharacterized protein LOC111015321 [Momordica charantia])

HSP 1 Score: 162.2 bits (409), Expect = 1.8e-36
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MMGGVEQQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKR 60
          MMGGVEQQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKR
Sbjct: 11 MMGGVEQQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKR 70

Query: 61 KFAMGAFLWPCDQY 75
          KFAMGAFLWPCDQY
Sbjct: 71 KFAMGAFLWPCDQY 84

[Close]

BLAST of Moc06g33400 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 9.7e-27
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 7  QQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA 66
          + QQR SK   QFQMPLHYPRYK+SDYE MPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA
Sbjct: 15 EHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA 74

Query: 67 FLWPCDQY 75
          FLWPC+ Y
Sbjct: 75 FLWPCEMY 82

[Close]

BLAST of Moc06g33400 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 7  QQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA 66
          + QQR SK F QFQMPLHYPRY++SDYE MPEWKLDCLLKEYGLP+VGDVAQKRKFAMGA
Sbjct: 15 EHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEYGLPVVGDVAQKRKFAMGA 74

Query: 67 FLWPCD 73
          FLWPC+
Sbjct: 75 FLWPCE 80

[Close]

BLAST of Moc06g33400 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.8 bits (312), Expect = 3.1e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 6  EQQQQRV-SKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAM 65
          +QQQQRV SKQF  FQMPLHYP+YK+SDYE M EWKLDCLLKEYGLP+ GDVAQKRKFAM
Sbjct: 24 QQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAM 83

Query: 66 GAFLWPCDQY 75
          GAFLWP + Y
Sbjct: 84 GAFLWPSEMY 93

[Close]

BLAST of Moc06g33400 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata])

HSP 1 Score: 124.8 bits (312), Expect = 3.1e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 6  EQQQQRV-SKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAM 65
          +QQQQRV SKQF  FQMPLHYP+YK+SDYE M EWKLDCLLKEYGLP+ GDVAQKRKFAM
Sbjct: 23 QQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAM 82

Query: 66 GAFLWPCDQY 75
          GAFLWP + Y
Sbjct: 83 GAFLWPSEMY 92

[Close]

BLAST of Moc06g33400 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.6e-37
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MMGGVEQQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKR 60
          MMGGVEQQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKR
Sbjct: 11 MMGGVEQQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKR 70

Query: 61 KFAMGAFLWPCDQY 75
          KFAMGAFLWPCDQY
Sbjct: 71 KFAMGAFLWPCDQY 84

[Close]

BLAST of Moc06g33400 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 7  QQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA 66
          + QQR SK F QFQMPLHYPRY++SDYE MPEWKLDCLLKEYGLP+VGDVAQKRKFAMGA
Sbjct: 19 EHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEYGLPVVGDVAQKRKFAMGA 78

Query: 67 FLWPCDQY 75
          FLWPC+ Y
Sbjct: 79 FLWPCEMY 86

[Close]

BLAST of Moc06g33400 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.7e-27
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 7  QQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA 66
          + QQR SK   QFQMPLHYPRYK+SDYE MPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA
Sbjct: 15 EHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA 74

Query: 67 FLWPCDQY 75
          FLWPC+ Y
Sbjct: 75 FLWPCEMY 82

[Close]

BLAST of Moc06g33400 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 6  EQQQQRV-SKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAM 65
          +QQQQRV SKQF  FQMPLHYP+YK+SDYE M EWKLDCLLKEYGLP+ GDVAQKRKFAM
Sbjct: 23 QQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAM 82

Query: 66 GAFLWPCDQY 75
          GAFLWP + Y
Sbjct: 83 GAFLWPSEMY 92

[Close]

BLAST of Moc06g33400 vs. ExPASy TrEMBL
Match: A0A2N9FY43 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19947 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-22
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 18 QFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGAFLWPCDQ 74
          QFQMPLHYPRYKKSDYE MPEWKLDCLL EYGLP+ GDV QKRKFAMGAFLWP  Q
Sbjct: 33 QFQMPLHYPRYKKSDYETMPEWKLDCLLNEYGLPVTGDVTQKRKFAMGAFLWPSQQ 88

[Close]

BLAST of Moc06g33400 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-19
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 15 QFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGAFLW 70
          Q   FQ+PLHYP+Y KSDYE MPEW+LD LL+EYGLP++GD  +KRKFA+GAFLW
Sbjct: 41 QSSSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLW 95

[Close]

BLAST of Moc06g33400 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 7.4e-17
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 19 FQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGAFLW 70
          F+MPLHYPRY K DY+ MPEWKLD +L +YGL   GD+A KR FA+GAFLW
Sbjct: 32 FRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIGAFLW 82

[Close]

BLAST of Moc06g33400 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-13
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 19 FQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGAFLWP 71
          FQ+PLHYP+Y KSDYE M + +LD LLK+YG    G +  KR FA+ +FLWP
Sbjct: 47 FQVPLHYPKYSKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWP 98

[Close]

BLAST of Moc06g33400 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 3.8e-13
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 19 FQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGD--VAQKRKFAMGAFLWP 71
          F+MPLHYPRY K DYE M EW+LD LL EYGL    D  + +KR FA+  F+WP
Sbjct: 36 FKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNTLHEKRAFAIDTFIWP 89

[Close]

BLAST of Moc06g33400 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 3.6e-11
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 19  FQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPI-VGDVAQKRKFAMGAFLW 70
           FQMPL YP Y K  Y+ M E +LD LLK YGLP  +G+++ K++FA+GAFLW
Sbjct: 57  FQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLW 108

The following BLAST results are available for this feature:

BLAST of Moc06g33400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146008.1	1.8e-36	100.00	uncharacterized protein LOC111015321 [Momordica charantia]	[more]
KAA0042696.1	9.7e-27	85.29	hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK0610...	[more]
KAE8647840.1	2.2e-26	84.85	hypothetical protein Csa_000107 [Cucumis sativus]	[more]
KAG7035999.1	3.1e-25	81.43	hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022958391.1	3.1e-25	81.43	uncharacterized protein LOC111459627 [Cucurbita moschata]	[more]

BLAST of Moc06g33400 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g33400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXF4	8.6e-37	100.00	uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A0A0KMG0	1.6e-27	83.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1	[more]
A0A5D3C447	4.7e-27	85.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1H1Y5	1.5e-25	81.43	uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A2N9FY43	2.0e-22	87.50	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19947 PE=4 SV=1	[more]

BLAST of Moc06g33400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41761.1	1.2e-19	70.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G55570.1	7.4e-17	68.63	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G55620.1	2.2e-13	57.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G09950.1	3.8e-13	59.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11405.1	3.6e-11	57.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33513:SF31	SUBFAMILY NOT NAMED	coord: 6..72
None	No IPR available	PANTHER	PTHR33513	OS06G0523300 PROTEIN	coord: 6..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g33400.1	Moc06g33400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008643	carbohydrate transport