Moc06g33260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g33260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ADP-ribosylation factor GTPase-activating protein like
Location	chr6: 25192626 .. 25193129 (+)
RNA-Seq Expression	Moc06g33260
Synteny	Moc06g33260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCAGAAAACAGCATAGAAGCAACGCTAATCCAAAATCTTGATGAAATCAACCGGATGCAAGAGGACCGAATCCACAACCTGGAAACCAAAGCCATTCAGCTCGCAAATCTATATTTCGTGTTCCAAGGCGTGATCCTCTCCGCCGTGTTCTCGCCGGCGTCGTCTCTCCGATGCCGACAATGGTGGATCCCGTTCTCGCTCTCTCTCCTCGCCGCCGCCCTCAACCTCTTCGCCTTCGCCGCCACCGTCCTCGCCTACCTCCGCTGCGCCGAAGCCCTCGACCAGAACATGGAGGATTTGGCCTCTGCGTCGGCCGCCGTCCGAGTCCTGGATTCTCCAACGATTAGACGGACCACGAAGCCGGACCGGTTCCGAAGGGCTCGGCGGAGGGTGTTTGCCGTTTTGGGGGTCGCAATTTTTGTTGGGTTCAGTGGGATTGTGCTCTTCGGTTGCCGTGTCCTTCTCTGTCCCTCCAGCTCCGGCGATCGGAATTTGTAG

mRNA sequence

ATGAACTCAGAAAACAGCATAGAAGCAACGCTAATCCAAAATCTTGATGAAATCAACCGGATGCAAGAGGACCGAATCCACAACCTGGAAACCAAAGCCATTCAGCTCGCAAATCTATATTTCGTGTTCCAAGGCGTGATCCTCTCCGCCGTGTTCTCGCCGGCGTCGTCTCTCCGATGCCGACAATGGTGGATCCCGTTCTCGCTCTCTCTCCTCGCCGCCGCCCTCAACCTCTTCGCCTTCGCCGCCACCGTCCTCGCCTACCTCCGCTGCGCCGAAGCCCTCGACCAGAACATGGAGGATTTGGCCTCTGCGTCGGCCGCCGTCCGAGTCCTGGATTCTCCAACGATTAGACGGACCACGAAGCCGGACCGGTTCCGAAGGGCTCGGCGGAGGGTGTTTGCCGTTTTGGGGGTCGCAATTTTTGTTGGGTTCAGTGGGATTGTGCTCTTCGGTTGCCGTGTCCTTCTCTGTCCCTCCAGCTCCGGCGATCGGAATTTGTAG

Coding sequence (CDS)

ATGAACTCAGAAAACAGCATAGAAGCAACGCTAATCCAAAATCTTGATGAAATCAACCGGATGCAAGAGGACCGAATCCACAACCTGGAAACCAAAGCCATTCAGCTCGCAAATCTATATTTCGTGTTCCAAGGCGTGATCCTCTCCGCCGTGTTCTCGCCGGCGTCGTCTCTCCGATGCCGACAATGGTGGATCCCGTTCTCGCTCTCTCTCCTCGCCGCCGCCCTCAACCTCTTCGCCTTCGCCGCCACCGTCCTCGCCTACCTCCGCTGCGCCGAAGCCCTCGACCAGAACATGGAGGATTTGGCCTCTGCGTCGGCCGCCGTCCGAGTCCTGGATTCTCCAACGATTAGACGGACCACGAAGCCGGACCGGTTCCGAAGGGCTCGGCGGAGGGTGTTTGCCGTTTTGGGGGTCGCAATTTTTGTTGGGTTCAGTGGGATTGTGCTCTTCGGTTGCCGTGTCCTTCTCTGTCCCTCCAGCTCCGGCGATCGGAATTTGTAG

Protein sequence

MNSENSIEATLIQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRVLDSPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSSGDRNL

Homology

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BLAST of Moc06g33260 vs. NCBI nr
Match: KAG2680998.1 (hypothetical protein I3760_11G124300 [Carya illinoinensis] >KAG6636674.1 hypothetical protein CIPAW_11G127200 [Carya illinoinensis] >KAG6671026.1 hypothetical protein I3843_Q020500 [Carya illinoinensis] >KAG6688458.1 hypothetical protein I3842_11G126200 [Carya illinoinensis] >KAG7956447.1 hypothetical protein I3843_11G124500 [Carya illinoinensis])

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-28
Identity = 74/147 (50.34%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 12  IQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSL 71
           I  LD IN+ QE+RIH LE KA+QL NLYFVFQGVILS++ S    + C  W++PF LSL
Sbjct: 60  IDELDGINQKQEERIHKLEAKALQLTNLYFVFQGVILSSI-SAKHHVECHHWYVPFILSL 119

Query: 72  LAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRVLDSPTIRRTTKPDRFRRARR 131
           +AA LN+ +   T+  YLR  E LDQN ED+         +    I   TKPD +++ +R
Sbjct: 120 IAALLNMVSLVGTLNKYLRYKEELDQNHEDIRKMKR--DRITRAQINNRTKPDLYKQWKR 179

Query: 132 RVFAVLGVAIFVGFSGIVLFGCRVLLC 159
           RVF+  GV +FVGFSG++L+GC  LLC
Sbjct: 180 RVFSYAGVILFVGFSGVILYGCHALLC 203

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BLAST of Moc06g33260 vs. NCBI nr
Match: KAE8055425.1 (hypothetical protein FH972_012265 [Carpinus fangiana])

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-27
Identity = 75/166 (45.18%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 10  TLIQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSL 69
           ++I+ L+ IN+ QE++I NLETKAIQL NLYFVFQGVILS++ S AS ++C  WWIPF L
Sbjct: 8   SVIEKLEAINKKQEEQIQNLETKAIQLTNLYFVFQGVILSSI-SSASPVKCHNWWIPFCL 67

Query: 70  SLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRVLDSPTIR----------- 129
           SL+AA LNL +   T+  +L+C+E LDQN ED    S   R+LD+               
Sbjct: 68  SLIAALLNLVSVFGTIRYFLKCSEELDQNYEDAHQESVRQRMLDTIVHANGHVQFQSSQS 127

Query: 130 ------RTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC 159
                    KPD  ++ +RRV     + + +GFS I+L+GC+ LLC
Sbjct: 128 EQEGDGNGPKPDPVKQRKRRVLCYAAMGLLLGFSCIILYGCKALLC 172

[Close]

BLAST of Moc06g33260 vs. NCBI nr
Match: KAF5460600.1 (hypothetical protein F2P56_020459, partial [Juglans regia])

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-27
Identity = 79/171 (46.20%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 12  IQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSL 71
           I+ L+ IN+ QE+RIHN+E KA+QL NLYFVFQGVILS++ S A+  +C  W IPF LSL
Sbjct: 47  IEKLEAINQKQEERIHNIEAKALQLTNLYFVFQGVILSSI-SIATPAKCHHWLIPFFLSL 106

Query: 72  LAAALNLFAFAATVLAYLRCAEALDQNMEDL------ASASAAVRVLD------------ 131
           LAA LNL A   TV  +LR +E LDQN EDL          A +  +D            
Sbjct: 107 LAALLNLVALIGTVSLFLRYSEELDQNYEDLRVMRLRGLTRAQIEEVDPGRPLRGSVVED 166

Query: 132 --SPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS 163
              P  R+  KPD ++  +R+VF+  G+  F+GFS ++L+GCR LLC  +S
Sbjct: 167 GMEPVFRQ--KPDAYKNRKRKVFSFAGICFFLGFSIVILYGCRALLCDKNS 214

[Close]

BLAST of Moc06g33260 vs. NCBI nr
Match: KAG6633990.1 (hypothetical protein CIPAW_12G087500 [Carya illinoinensis])

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-27
Identity = 78/170 (45.88%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 12  IQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSL 71
           I+NL+ IN+ QE+RIHN+E KA+QL NLYFVFQGVILS++ S AS  +C  W IPF LSL
Sbjct: 27  IKNLEAINQKQEERIHNIEAKALQLTNLYFVFQGVILSSI-SSASPAKCHNWLIPFFLSL 86

Query: 72  LAAALNLFAFAATVLAYLRCAEALDQNMEDL------ASASAAVRVLD------------ 131
           +AA LNL A   TV  +LR +E LDQN EDL          A +  +D            
Sbjct: 87  VAALLNLVALFGTVTLFLRYSEELDQNYEDLRVMRVRRLTRAQIEEVDPGSPLLGVVEDG 146

Query: 132 -SPTIRRTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS 163
             P  R+   PD +++  RRV++  G+  F+GFS ++L+GCR LLC + +
Sbjct: 147 MKPVFRQ--NPDAYKKLMRRVYSFAGIGFFLGFSIVILYGCRALLCDNKT 193

[Close]

BLAST of Moc06g33260 vs. NCBI nr
Match: PON47942.1 (hypothetical protein TorRG33x02_321770 [Trema orientale])

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-27
Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 12  IQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSL 71
           ++ L EIN  QE RIHNLETKA+QL NLYFVFQGVILS +     SL C + WIPF LSL
Sbjct: 24  VKELQEINTKQEARIHNLETKALQLTNLYFVFQGVILSTI--ATKSLLCDRSWIPFVLSL 83

Query: 72  LAAALNLFAFAATVLAYLRCAEALDQNMEDL-----ASASAAVRVLDSPTIRRTTKPDRF 131
           LAA LN  A   T+L +++C+E LDQN+EDL        + A      P +R+  +PD  
Sbjct: 84  LAAILNTAALCHTILVFVKCSEELDQNLEDLRVMKEEQLTRAELEKQQPAVRQ--RPDPV 143

Query: 132 RRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC 159
            +  RR F++  +A+FVGFS ++LFGC  +LC
Sbjct: 144 AQIVRRGFSIFSIALFVGFSVVILFGCFAILC 171

[Close]

BLAST of Moc06g33260 vs. ExPASy TrEMBL
Match: A0A5N6R5M6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_012265 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.6e-28
Identity = 75/166 (45.18%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 10  TLIQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSL 69
           ++I+ L+ IN+ QE++I NLETKAIQL NLYFVFQGVILS++ S AS ++C  WWIPF L
Sbjct: 8   SVIEKLEAINKKQEEQIQNLETKAIQLTNLYFVFQGVILSSI-SSASPVKCHNWWIPFCL 67

Query: 70  SLLAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRVLDSPTIR----------- 129
           SL+AA LNL +   T+  +L+C+E LDQN ED    S   R+LD+               
Sbjct: 68  SLIAALLNLVSVFGTIRYFLKCSEELDQNYEDAHQESVRQRMLDTIVHANGHVQFQSSQS 127

Query: 130 ------RTTKPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC 159
                    KPD  ++ +RRV     + + +GFS I+L+GC+ LLC
Sbjct: 128 EQEGDGNGPKPDPVKQRKRRVLCYAAMGLLLGFSCIILYGCKALLC 172

[Close]

BLAST of Moc06g33260 vs. ExPASy TrEMBL
Match: A0A2P5BGM9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321770 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 12  IQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSL 71
           ++ L EIN  QE RIHNLETKA+QL NLYFVFQGVILS +     SL C + WIPF LSL
Sbjct: 24  VKELQEINTKQEARIHNLETKALQLTNLYFVFQGVILSTI--ATKSLLCDRSWIPFVLSL 83

Query: 72  LAAALNLFAFAATVLAYLRCAEALDQNMEDL-----ASASAAVRVLDSPTIRRTTKPDRF 131
           LAA LN  A   T+L +++C+E LDQN+EDL        + A      P +R+  +PD  
Sbjct: 84  LAAILNTAALCHTILVFVKCSEELDQNLEDLRVMKEEQLTRAELEKQQPAVRQ--RPDPV 143

Query: 132 RRARRRVFAVLGVAIFVGFSGIVLFGCRVLLC 159
            +  RR F++  +A+FVGFS ++LFGC  +LC
Sbjct: 144 AQIVRRGFSIFSIALFVGFSVVILFGCFAILC 171

[Close]

BLAST of Moc06g33260 vs. ExPASy TrEMBL
Match: A0A5N6R6D7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_012264 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 78/173 (45.09%), Postives = 110/173 (63.58%), Query Frame = 0


Query: 2   NSENSIEATLIQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCR 61
           +S NS   T I+ L +IN+ QE++I +LETK I L NLYFVFQGVILS++ S AS ++CR
Sbjct: 7   SSNNSEVQTDIEKLHDINKKQEEQIQSLETKVIHLTNLYFVFQGVILSSI-SSASPVKCR 66

Query: 62  QWWIPFSLSLLAAALNLFAFAATVLAYLRCAEALDQNMEDL----------ASASAAVRV 121
           + WIPF LSL+AA LNL +   T+  +LRC+E LDQN ED+          A  +A    
Sbjct: 67  KSWIPFCLSLIAAFLNLVSVFGTITYFLRCSEELDQNYEDIQTMRSSGMTRAQVNAVEPG 126

Query: 122 LDSPTIRRTTKP--DRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS 163
             S      T+P  D F + +R++F    + + +GFSGI+L+GCR LLC +++
Sbjct: 127 SSSSKEEGITRPRADPFEQWKRKLFCYAAMGLLLGFSGIILYGCRALLCDTTN 178

[Close]

BLAST of Moc06g33260 vs. ExPASy TrEMBL
Match: A0A7N2KVA0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-26
Identity = 75/155 (48.39%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 12  IQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSL 71
           I+ L +IN  QE RI  LE KA+QL NLYFVFQGVILS   S A S++C  WWIPF LSL
Sbjct: 19  IEKLTKINEKQEKRIRALEAKALQLTNLYFVFQGVILSTCAS-ARSIKCHHWWIPFVLSL 78

Query: 72  LAAALNLFAFAATVLAYLRCAEALDQNMEDLASASAAVRVLDSPTIRRTTKPDRFRRARR 131
           LAA LNLFAF  TV   L C E  DQN   L    A           R   PD  ++  R
Sbjct: 79  LAAILNLFAFYFTVEKILSCREHFDQNTVHLGDLKARSEQNPPGDSLRPESPDPCKKRWR 138

Query: 132 RVFAVLGVAIFVGFSGIVLFGCRVLLCPSSSGDRN 167
           RV A   + + +GFSG+VL+GC  +LC   S + +
Sbjct: 139 RVLAYASIGLSLGFSGVVLYGCHAILCYKRSNEND 172

[Close]

BLAST of Moc06g33260 vs. ExPASy TrEMBL
Match: A0A7J0FRI3 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_14g0009500 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.9e-26
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 0


Query: 12  IQNLDEINRMQEDRIHNLETKAIQLANLYFVFQGVILSAVFSPASSLRCRQWWIPFSLSL 71
           I+ L++ N+ QE R+ NLETK++Q+ NLYFVFQGVIL++V S +SSLRC  WWIPFSLSL
Sbjct: 18  IEKLEKNNKKQEQRVRNLETKSLQVLNLYFVFQGVILTSV-SNSSSLRCHNWWIPFSLSL 77

Query: 72  LAAALNLFAFAATVLAYLRCAEALDQNMEDLA------------SASAAVRVLDSPTIRR 131
           LAA LNL+A    V   L+  E +DQ   DL             S       L+ P    
Sbjct: 78  LAATLNLYALVDNVSKILKSKEEIDQAKADLGLVRLYRMTKAQISQVLPGTRLNQPGTEE 137

Query: 132 TT-----KPDRFRRARRRVFAVLGVAIFVGFSGIVLFGCRVLLCPSSS 163
            T     KPD  RR RRR  A L + + +GFSG V++GC ++LC SS+
Sbjct: 138 VTEVFRPKPDLARRWRRRAAAGLAIGLCMGFSGAVMYGCYIILCHSSN 184

The following BLAST results are available for this feature:

BLAST of Moc06g33260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG2680998.1	1.4e-28	50.34	hypothetical protein I3760_11G124300 [Carya illinoinensis] >KAG6636674.1 hypothe...	[more]
KAE8055425.1	1.2e-27	45.18	hypothetical protein FH972_012265 [Carpinus fangiana]	[more]
KAF5460600.1	1.2e-27	46.20	hypothetical protein F2P56_020459, partial [Juglans regia]	[more]
KAG6633990.1	2.0e-27	45.88	hypothetical protein CIPAW_12G087500 [Carya illinoinensis]	[more]
PON47942.1	2.6e-27	50.00	hypothetical protein TorRG33x02_321770 [Trema orientale]	[more]

BLAST of Moc06g33260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g33260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N6R5M6	5.6e-28	45.18	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_012265 PE=4 SV=1	[more]
A0A2P5BGM9	1.3e-27	50.00	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321770 PE=4 SV...	[more]
A0A5N6R6D7	2.1e-27	45.09	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_012264 PE=4 SV=1	[more]
A0A7N2KVA0	2.4e-26	48.39	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A7J0FRI3	6.9e-26	46.43	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_14g0009500 PE=4 SV=1	[more]

BLAST of Moc06g33260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..32
None	No IPR available	PANTHER	PTHR33287:SF2	SUBFAMILY NOT NAMED	coord: 11..160
None	No IPR available	PANTHER	PTHR33287	OS03G0453550 PROTEIN	coord: 11..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g33260.1	Moc06g33260.1	mRNA