Moc06g33190 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g33190
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022160
Locationchr6: 25155099 .. 25155755 (-)
RNA-Seq ExpressionMoc06g33190
SyntenyMoc06g33190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTACCAGCATGTATCCAGATTGAACATTTCTTCAGGGGTTTGGACCATCCCACTAAGATGATGCTCAACAATGCTGCAAATTGAGCCTTCACGAAGAAGACCTTCAACGAAATAGTTGATATTTTGGAGGACCTAGCGTCCCACAATGAGCTATGGTGTTCTCAAAGGTCGAAACCTGCACCTAAGAAGCAAGACACAGCAGGAGTGTTGGCATTGGACATCGCAACTTCAATGCACAAAGAGATGGTGATAATGACCCAAATGCTCAAGGATATGGCCTTGGACAGGAAGAACACACCGACCACACCGGTGCAACCTGCACAACCTGTGCAACCTGAATATACTGCCCCTTCTCCTGTTTGCCAAATTAATGAAATTGTTTGTTCTTATTGTAATGATAATCATCTCTATGAGAACATGTAAAAATGGTAAACTCTTTTTCCCTGGTTTGATCACCTCACTATGTCTTCGTCAAGGTGTTGGGATTCTGGAAGGCCAAATTGAGAGAAAGTTCCTGATGATAGAGGAACAGAACTTGAAGCGACTTTTGGGACATGCGCTTGCTCGGGAGGCAGTTCGAGGAGGCTCAACGAATTCTGAGATTCGAGCCCTGAGGGACATTGTCGTCGGTTGGAGCACAAATTGGAGGTAA

mRNA sequence

ATGGATTACCAGCATAAGACCTTCAACGAAATAGTTGATATTTTGGAGGACCTAGCGTCCCACAATGAGCTATGGTGTTCTCAAAGGTCGAAACCTGCACCTAAGAAGCAAGACACAGCAGGAGTGTTGGCATTGGACATCGCAACTTCAATGCACAAAGAGATGGTGATAATGACCCAAATGCTCAAGGATATGGCCTTGGACAGGAAGAACACACCGACCACACCGGTGCAACCTGCACAACCTGTGCAACCTGAATATACTGCCCCTTCTCCTGTTTGCCAAATTAATGAAATTGTTTGTGTTGGGATTCTGGAAGGCCAAATTGAGAGAAAGTTCCTGATGATAGAGGAACAGAACTTGAAGCGACTTTTGGGACATGCGCTTGCTCGGGAGGCAGTTCGAGGAGGCTCAACGAATTCTGAGATTCGAGCCCTGAGGGACATTGTCGTCGGTTGGAGCACAAATTGGAGGTAA

Coding sequence (CDS)

ATGGATTACCAGCATAAGACCTTCAACGAAATAGTTGATATTTTGGAGGACCTAGCGTCCCACAATGAGCTATGGTGTTCTCAAAGGTCGAAACCTGCACCTAAGAAGCAAGACACAGCAGGAGTGTTGGCATTGGACATCGCAACTTCAATGCACAAAGAGATGGTGATAATGACCCAAATGCTCAAGGATATGGCCTTGGACAGGAAGAACACACCGACCACACCGGTGCAACCTGCACAACCTGTGCAACCTGAATATACTGCCCCTTCTCCTGTTTGCCAAATTAATGAAATTGTTTGTGTTGGGATTCTGGAAGGCCAAATTGAGAGAAAGTTCCTGATGATAGAGGAACAGAACTTGAAGCGACTTTTGGGACATGCGCTTGCTCGGGAGGCAGTTCGAGGAGGCTCAACGAATTCTGAGATTCGAGCCCTGAGGGACATTGTCGTCGGTTGGAGCACAAATTGGAGGTAA

Protein sequence

MDYQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQMLKDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVCVGILEGQIERKFLMIEEQNLKRLLGHALAREAVRGGSTNSEIRALRDIVVGWSTNWR
Homology
[Close]
BLAST of Moc06g33190 vs. NCBI nr
Match: XP_022150317.1 (uncharacterized protein LOC111018514 [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 9.0e-30
Identity = 74/99 (74.75%), Postives = 79/99 (79.80%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDILEDLASHNELWCSQRSKPAPKKQD AGVLALDIATSM KEM  M QML
Sbjct: 45  FTKKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDQAGVLALDIATSMQKEMXTMNQML 104

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVC 102
           K++AL+RK+       P  P QPEY   SPVCQINEIVC
Sbjct: 105 KELALERKSA------PXXPXQPEYA--SPVCQINEIVC 135

[Close]
BLAST of Moc06g33190 vs. NCBI nr
Match: XP_022143608.1 (uncharacterized protein LOC111013464 [Momordica charantia])

HSP 1 Score: 137.9 bits (346), Expect = 7.6e-29
Identity = 70/107 (65.42%), Postives = 80/107 (74.77%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDIL DLASHNELWCSQR + APKKQD AGVLALDIATSM KEMV M Q L
Sbjct: 11  FTKKTFNEIVDILNDLASHNELWCSQRYRAAPKKQDPAGVLALDIATSMQKEMVTMNQRL 70

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVCVGILEGQI 110
           K+MAL  KN    P+   QPVQP+Y  P+PVCQ+N+++C    E  I
Sbjct: 71  KEMALGIKNPLAMPI---QPVQPDYCTPAPVCQVNDLICSFCSENHI 114

[Close]
BLAST of Moc06g33190 vs. NCBI nr
Match: XP_022159345.1 (uncharacterized protein LOC111025764 [Momordica charantia])

HSP 1 Score: 134.4 bits (337), Expect = 8.4e-28
Identity = 68/107 (63.55%), Postives = 79/107 (73.83%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDIL DLASHNELWCSQRS+ APKKQD AGVLALDIA+SM KE V M Q L
Sbjct: 11  FTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAGVLALDIASSMQKEKVTMNQRL 70

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVCVGILEGQI 110
           K+M L  KN   TP+   QPVQ +Y  P+PVCQ+N+++C    E  I
Sbjct: 71  KEMVLGLKNPLATPI---QPVQSDYCTPAPVCQVNDLICSFCSENHI 114

[Close]
BLAST of Moc06g33190 vs. NCBI nr
Match: XP_022158408.1 (uncharacterized protein LOC111024897, partial [Momordica charantia])

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-27
Identity = 67/99 (67.68%), Postives = 77/99 (77.78%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDIL DLASHNELWCSQRS+ APKKQD AGVLALDIATSM KEMV M Q L
Sbjct: 278 FTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAGVLALDIATSMQKEMVTMNQRL 337

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVC 102
           K+MAL  KN   T +   QPVQ +Y   +PVCQ+N+++C
Sbjct: 338 KEMALGIKNPLATXI---QPVQSDYCTHAPVCQVNDLIC 373

[Close]
BLAST of Moc06g33190 vs. NCBI nr
Match: XP_022155016.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia])

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-24
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 3    YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
            +  KTFNEIVDILEDLASHNELWCSQRSKPAPKKQD AGVLALDI TSM KE+V M QM+
Sbjct: 1184 FTKKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDQAGVLALDIVTSMQKEIVTMNQMV 1243

Query: 63   KDMALDRKNTPTTPVQ 79
            K++AL+RK+ PTT VQ
Sbjct: 1244 KELALERKSAPTTTVQ 1259

[Close]
BLAST of Moc06g33190 vs. ExPASy TrEMBL
Match: A0A6J1DAE9 (uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018514 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 4.4e-30
Identity = 74/99 (74.75%), Postives = 79/99 (79.80%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDILEDLASHNELWCSQRSKPAPKKQD AGVLALDIATSM KEM  M QML
Sbjct: 45  FTKKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDQAGVLALDIATSMQKEMXTMNQML 104

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVC 102
           K++AL+RK+       P  P QPEY   SPVCQINEIVC
Sbjct: 105 KELALERKSA------PXXPXQPEYA--SPVCQINEIVC 135

[Close]
BLAST of Moc06g33190 vs. ExPASy TrEMBL
Match: A0A6J1CR45 (uncharacterized protein LOC111013464 OS=Momordica charantia OX=3673 GN=LOC111013464 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29
Identity = 70/107 (65.42%), Postives = 80/107 (74.77%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDIL DLASHNELWCSQR + APKKQD AGVLALDIATSM KEMV M Q L
Sbjct: 11  FTKKTFNEIVDILNDLASHNELWCSQRYRAAPKKQDPAGVLALDIATSMQKEMVTMNQRL 70

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVCVGILEGQI 110
           K+MAL  KN    P+   QPVQP+Y  P+PVCQ+N+++C    E  I
Sbjct: 71  KEMALGIKNPLAMPI---QPVQPDYCTPAPVCQVNDLICSFCSENHI 114

[Close]
BLAST of Moc06g33190 vs. ExPASy TrEMBL
Match: A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.1e-28
Identity = 68/107 (63.55%), Postives = 79/107 (73.83%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDIL DLASHNELWCSQRS+ APKKQD AGVLALDIA+SM KE V M Q L
Sbjct: 11  FTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAGVLALDIASSMQKEKVTMNQRL 70

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVCVGILEGQI 110
           K+M L  KN   TP+   QPVQ +Y  P+PVCQ+N+++C    E  I
Sbjct: 71  KEMVLGLKNPLATPI---QPVQSDYCTPAPVCQVNDLICSFCSENHI 114

[Close]
BLAST of Moc06g33190 vs. ExPASy TrEMBL
Match: A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 67/99 (67.68%), Postives = 77/99 (77.78%), Query Frame = 0 

Query: 3   YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
           +  KTFNEIVDIL DLASHNELWCSQRS+ APKKQD AGVLALDIATSM KEMV M Q L
Sbjct: 278 FTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAGVLALDIATSMQKEMVTMNQRL 337

Query: 63  KDMALDRKNTPTTPVQPAQPVQPEYTAPSPVCQINEIVC 102
           K+MAL  KN   T +   QPVQ +Y   +PVCQ+N+++C
Sbjct: 338 KEMALGIKNPLATXI---QPVQSDYCTHAPVCQVNDLIC 373

[Close]
BLAST of Moc06g33190 vs. ExPASy TrEMBL
Match: A0A6J1DQF5 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 OS=Momordica charantia OX=3673 GN=LOC111022160 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 9.4e-25
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 3    YQHKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDTAGVLALDIATSMHKEMVIMTQML 62
            +  KTFNEIVDILEDLASHNELWCSQRSKPAPKKQD AGVLALDI TSM KE+V M QM+
Sbjct: 1184 FTKKTFNEIVDILEDLASHNELWCSQRSKPAPKKQDQAGVLALDIVTSMQKEIVTMNQMV 1243

Query: 63   KDMALDRKNTPTTPVQ 79
            K++AL+RK+ PTT VQ
Sbjct: 1244 KELALERKSAPTTTVQ 1259

The following BLAST results are available for this feature:
BLAST of Moc06g33190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150317.19.0e-3074.75uncharacterized protein LOC111018514 [Momordica charantia][more]
XP_022143608.17.6e-2965.42uncharacterized protein LOC111013464 [Momordica charantia][more]
XP_022159345.18.4e-2863.55uncharacterized protein LOC111025764 [Momordica charantia][more]
XP_022158408.14.2e-2767.68uncharacterized protein LOC111024897, partial [Momordica charantia][more]
XP_022155016.11.9e-2478.95LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia][more]
BLAST of Moc06g33190 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g33190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DAE94.4e-3074.75uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1CR453.7e-2965.42uncharacterized protein LOC111013464 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DYG04.1e-2863.55uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DW022.0e-2767.68uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DQF59.4e-2578.95LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 OS=Momordica charantia... [more]
BLAST of Moc06g33190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g33190.1Moc06g33190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding