Moc06g31520 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g31520
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Locationchr6: 23712560 .. 23716046 (+)
RNA-Seq ExpressionMoc06g31520
SyntenyMoc06g31520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCATCATCTCAACCCTCCCAGGGCCGATTTGATTACAGAAGGTCAGATTCGGGTTCTAGACGAAGAAGACCTTACGAATGATACACTCCAAGAACCATCCCCATTTCTGAGATCTTTACTAATATCAAAGAGACGGGGATGGAGAAGCTCCTCAAGCGCCCTAAGAAACTTAGAGGAGACTCTGAAAAGCACAACAAAGACAGGTATTGCCGTTTCCACCACGACCACGGCCATGATACCTCAAGTTGCGGGGAGTTGAAGCGCCAGATTGAAGACTTGATTCAAGATTGCTATTTCAAGAAATATGTAGGTAAGCCGAGATCGAGCTCGACAGAAAAGAAAGATGAGAGGAAGCGTTCAAGGACGCCACTTCGGAAAGATGATCGACCTGCGGTTATCAACACCATTTTCAGAGAGGCCCGAGTGGAGGCCAGTCTAGAAACAAAAGGAAGGAGCTTTCCAGAGAAGCTAGGCTCAAAGTTTGCGCCATTCAAGAGCAGAAACCGACCTGCCCCATATCCTTCTCTGACTCTGACTTGGAAGGGGTCCATCTGTCCCATAATGACGTCCTGGTGATCTCCCCTCTGATCGACCACGTGCAGGTTAGGACAGTGCTGGTAGATGGTGGCGCCTCACCCAATATCCTATCTCTCACCACTTACATAGCTTTGGCGTGGACCGGGGCATAACTCAGGAGAAGTCCAACACCTTTATTTGGATTTGCAGGGGAATCAGTGACCGTCGAATGATGTGTCGACCTCCCTACCACAATTGGCCAGGGGGACACTCAAGTTACCCAGATGACCGAGTTTGTGGTGATAGATGGCAGATCAACTTACAACGCCATCTTCGAACGACCAATCATCCACTCACTTAGGGCCATCCCATCGACCATTCATCAAGTCGTGAAGTATTCTACCCTGAATCGAGTTGGAATAGTTTGATGTGAAAAGAAGACTTCCAGGGACTGTTATGCTTCAGCACTCAAAGGATCGACAATTTGTGCCTTAGAAGATGAGGCAACCCTGCCTAAGTAGATCGTCCTACCTTCTGAGGACGAGCAACTCAAGAGCAACCAGCGTGAAGTTGTTACACCCATTGAGGAGCTGGAGCTTGTCCCCTTACTCTGCCTAGAGAAGCAAGTGAACATAGGTACCATGCTAGGAGCCGCTGATAGGGAAGAACTTATCTCCTTCCTTAGATCCAACTCTGACATGTTCGCATGGTCTCACAAAGACATGTCTGGCATTGATCCGAAGATAATGGTGCATCGCCTCAACATTGACCCATCATTCCGACCTGTTAAGCAAAAAAGATGACCTGTAAATAAAGAGAGGAGTGATGTAATTGTTGAGGAAATAAACAAATTGCTCAAAGCTGAATACATAAAAGAAATTTTGTATCCCGAGTGGCTCTCTAATATTGTTCTAGTCAAAAAATCTAGCAGAAAGTGGAGAATGTATATAGACTTCACTAATCTTAATAAGGCGTGCCCAAAAGATTGCTTCCCACTATCGAGGATCGACCAGCTCGTAGACGCTACGGTCGGGCACGAGCTGCTCACCTTTATGGATGCTTACTTCAGATACAACCAAATAAAAATGCACAAGCTCGACCATGTCCACACTTCCTTCATAACTGATCAGGGTCTGTATTGCTACAAAGTCATGTCATTTGGTCTAAAGAATGCAGGTGCAACCTATCAAAGGATGGTGAATAAAATTTTTACTAATCAGATCGGATGTAACATGGAGATATATGTGGACGACATGCTTGTCAAGAGCAAGCAATCTAGGTCACACCTTGCCGACCTGACTGAACCCTTTGAGGTTTTTCATAAGTACCGGATGAAACTCAATCCGGCCAAGTGTGCCTTCGGAGTCTCGTCTGGGAAGTTCCTTGGATTTATGGTGAACAACCGAGGAATAGATACCAACCCAGAAAAATTAAGATCGTGCTCGAGATGTAAGCACTAAAGACTCTCAAACAGCTGCAATGGTTGAATGAGAGAATTGTTGTTTTAAACAAATTTGTGTCCAGGTCTACCGACAAATGCCTCCCATTTCTCAAAATATTAAGAAAGAAAGGGTCGTTCAAATGGTCATCCGAGTGCGAGGAAGCCTTTGAACAGCTCAAAAACTACCTCTGCTCGACACCGCTTCTGGCAAAACCTTTGCTAGGAGACAAGTTACACTTGTACTTGGCCAAGCTGACGATAGTCGTGTCTGACAATGCCGTCAGCTTGACCTTAATTAAGCAAGAGGAAGTGCACCAGAGTCCAGTTTACTACAGAAGTAAGGTCATCACCGAGGTTGAGACCAGATATCCCCAAATGGAGAAGTTGGCCCTCGCGGTTGGTCACTTCGGCACGAAGACTTAAGCCCTACTTCCAAGCACATACCATGACCGTGCTCACGAACCTACCCTTGAAGCAAGTCTTTCACAAGCCAGAGACATCTGACAGATTAATAAAGTGGCCAGTGGAGTTGAATGAATATGATATTCAGTTCGAACCACGAACAGCTATGAAGAGGCAAGCTATAGCCGACTTTATAGCGAGCTCACACCACCACTACCTAAGACTTCCGAGTTTGACCTGCCATGGACCATGTATATTGACGGGTCCTCCAATGAAAGGGGATGTGGTGTAGGTGTGCTCCTACTCGCACCAGATGGCATGCGCTACGAGTATGCTCTACACTTCAACTTCCGTACCTCAAATAACGAGGCCGAGTACAAAGCCTTTTTGGTTGGATTGCACATGGCTAATGGGCTAGAAGCCAGCCACATCCAAATTTTCAGCGACTCAGCTGATTCTGAACCAAATTAAAGAGGAGTACCAGACAAAGGATTCTTGGATGGAGAAGTACCTGAGCAAGGTCAGGTCGCACCTTGCTTAGTTTCGGGCTTACGAGATTAACCAAATTCCGAGATCCAAGAATTCAAACGCAGATGCCTTGGCCAAATTGGCATCCGCCTATGAGACTGACCTCGCGAGATCGGTCCCAATGGAGATATTAGACCCTCCTTCCATCCTGGAGCTAGACGTGATTCCATCCTGGAGCCAGACGTGATGGAAGTTTATTCCCAACCCCTATCATGGATGGATCCAATCAAGGAATTCTTGATGGGCAATGTAGGACTCAAATGAAGCAAAGAAAATGTCATGAAAGGCAGTTCGGTACCTGTTCCAAGATGGAGTCATGTATCGACACGGATTCTCCCTGCCTCTTTTCAAGTGCACTTTGGAAGAAGAGGGCTATTATGTTTTAAGGGAAATACACGAAGGCATATGCGGCAACCATTCGGGGGCCAGGTCGTTATCGACCAAGGTAGTCCATCAAGATTACTATTGGCCTACAATAGACCGAGATGCGAAGGAGTTTGTGAAGACGTGTGACAATTGCCAGCATTTCGTGAACATTATTCACCAGCCTCCCGAGTTACTTACTCTGATCTCCGCCCCTTGGCCATTTGCCTAG

mRNA sequence

ATGGATCATCATCTCAACCCTCCCAGGGCCGATTTGATTACAGAAGGTCAGATTCGGGTTCTAGACGAAGAAGACCTTACGAATGATACACTCCAAGAACCATCCCCATTTCTGAGATCTTTACTAATATCAAAGAGACGGGGATGGAGAAGCTCCTCAAGCGCCCTAAGAAACTTAGAGGAGACTCTGAAAAGCACAACAAAGACAGGTAAGCCGAGATCGAGCTCGACAGAAAAGAAAGATGAGAGGAAGCGTTCAAGGACGCCACTTCGGAAAGATGATCGACCTGCGGTTATCAACACCATTTTCAGAGAGGCCCGAGTGGAGGCCAGTCTAGAAACAAAAGGAAGGAGCTTTCCAGAGAAGCTAGGCTCAAAGTTTGCGCCATTCAAGAGCAGAAACCGACCTGCCCCATATCCTTCTCTGACTCTGACTTGGAAGGGGTCCATCTGTCCCATAATGACGTCCTGGGGAATCAGTGACCGTCGAATGATGTGTCGACCTCCCTACCACAATTGGCCAGGGGGACACTCAAGTTACCCAGATGACCGAATCGTCCTACCTTCTGAGGACGAGCAACTCAAGAGCAACCAGCGTGAAGTTGTTACACCCATTGAGGAGCTGGAGCTTGTCCCCTTACTCTGCCTAGAGAAGCAAGTGAACATAGTTCGGTACCTGTTCCAAGATGGAGTCATGTATCGACACGGATTCTCCCTGCCTCTTTTCAAGTGCACTTTGGAAGAAGAGGGCTATTATGTTTTAAGGGAAATACACGAAGGCATATGCGGCAACCATTCGGGGGCCAGGTCGTTATCGACCAAGGTAGTCCATCAAGATTACTATTGGCCTACAATAGACCGAGATGCGAAGGAGTTTGTGAAGACGTGTGACAATTGCCAGCATTTCGTGAACATTATTCACCAGCCTCCCGAGTTACTTACTCTGATCTCCGCCCCTTGGCCATTTGCCTAG

Coding sequence (CDS)

ATGGATCATCATCTCAACCCTCCCAGGGCCGATTTGATTACAGAAGGTCAGATTCGGGTTCTAGACGAAGAAGACCTTACGAATGATACACTCCAAGAACCATCCCCATTTCTGAGATCTTTACTAATATCAAAGAGACGGGGATGGAGAAGCTCCTCAAGCGCCCTAAGAAACTTAGAGGAGACTCTGAAAAGCACAACAAAGACAGGTAAGCCGAGATCGAGCTCGACAGAAAAGAAAGATGAGAGGAAGCGTTCAAGGACGCCACTTCGGAAAGATGATCGACCTGCGGTTATCAACACCATTTTCAGAGAGGCCCGAGTGGAGGCCAGTCTAGAAACAAAAGGAAGGAGCTTTCCAGAGAAGCTAGGCTCAAAGTTTGCGCCATTCAAGAGCAGAAACCGACCTGCCCCATATCCTTCTCTGACTCTGACTTGGAAGGGGTCCATCTGTCCCATAATGACGTCCTGGGGAATCAGTGACCGTCGAATGATGTGTCGACCTCCCTACCACAATTGGCCAGGGGGACACTCAAGTTACCCAGATGACCGAATCGTCCTACCTTCTGAGGACGAGCAACTCAAGAGCAACCAGCGTGAAGTTGTTACACCCATTGAGGAGCTGGAGCTTGTCCCCTTACTCTGCCTAGAGAAGCAAGTGAACATAGTTCGGTACCTGTTCCAAGATGGAGTCATGTATCGACACGGATTCTCCCTGCCTCTTTTCAAGTGCACTTTGGAAGAAGAGGGCTATTATGTTTTAAGGGAAATACACGAAGGCATATGCGGCAACCATTCGGGGGCCAGGTCGTTATCGACCAAGGTAGTCCATCAAGATTACTATTGGCCTACAATAGACCGAGATGCGAAGGAGTTTGTGAAGACGTGTGACAATTGCCAGCATTTCGTGAACATTATTCACCAGCCTCCCGAGTTACTTACTCTGATCTCCGCCCCTTGGCCATTTGCCTAG

Protein sequence

MDHHLNPPRADLITEGQIRVLDEEDLTNDTLQEPSPFLRSLLISKRRGWRSSSSALRNLEETLKSTTKTGKPRSSSTEKKDERKRSRTPLRKDDRPAVINTIFREARVEASLETKGRSFPEKLGSKFAPFKSRNRPAPYPSLTLTWKGSICPIMTSWGISDRRMMCRPPYHNWPGGHSSYPDDRIVLPSEDEQLKSNQREVVTPIEELELVPLLCLEKQVNIVRYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYYWPTIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPWPFA
Homology
[Close]
BLAST of Moc06g31520 vs. NCBI nr
Match: XP_022158092.1 (uncharacterized protein LOC111024661 [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 3.6e-41
Identity = 76/100 (76.00%), Postives = 86/100 (86.00%), Query Frame = 0 

Query: 224 RYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYYWP 283
           R++ +DGV+YR GFSLPL KC   EEG Y+LREIHEG+CGNHSGARSLS KVV Q YYWP
Sbjct: 323 RFILRDGVLYRRGFSLPLLKCVTPEEGLYILREIHEGVCGNHSGARSLSAKVVRQGYYWP 382

Query: 284 TIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPWPFA 324
           T++ DAK+FVKTCDNCQ F +IIHQPPELLT ISAPWPFA
Sbjct: 383 TVEHDAKQFVKTCDNCQRFASIIHQPPELLTPISAPWPFA 422

[Close]
BLAST of Moc06g31520 vs. NCBI nr
Match: XP_022136678.1 (uncharacterized protein LOC111008330 [Momordica charantia])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-40
Identity = 84/147 (57.14%), Postives = 106/147 (72.11%), Query Frame = 0 

Query: 182 DDRIVLPSEDEQLKSNQREVVTPIEE-LELVPLLCLEKQVNI----VRYLFQDGVMYRHG 241
           D+  +L  +  Q+ +     + PI E ++  PLL L++Q  +      ++ +DG +YR G
Sbjct: 249 DNLSILEPDVMQVDTPVPSWIDPIVEFIKGTPLLDLKEQKKMAWKAAWFILRDGALYRRG 308

Query: 242 FSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYYWPTIDRDAKEFVKTC 301
           FSLPL KC   EE  Y++REIHEG+CGNHSGARSLS KVV Q YYWPT+++DAK+FVKTC
Sbjct: 309 FSLPLLKCVTPEEDLYIIREIHEGVCGNHSGARSLSAKVVRQGYYWPTVEQDAKQFVKTC 368

Query: 302 DNCQHFVNIIHQPPELLTLISAPWPFA 324
           DNCQ F NIIHQPPELLTLI APWPFA
Sbjct: 369 DNCQRFTNIIHQPPELLTLILAPWPFA 395

[Close]
BLAST of Moc06g31520 vs. NCBI nr
Match: XP_022154404.1 (uncharacterized protein LOC111021681 [Momordica charantia])

HSP 1 Score: 175.6 bits (444), Expect = 6.7e-40
Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 0 

Query: 205 IEELELVPLLCLEKQVNI----VRYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEG 264
           +E ++  PLL  ++Q  +     R++ +DG +YR GFSLPL KC   EEG Y+LREIHEG
Sbjct: 192 VEFIKGNPLLDSKEQKKMARKAARFILRDGALYRRGFSLPLIKCVTPEEGIYILREIHEG 251

Query: 265 ICGNHSGARSLSTKVVHQDYYWPTIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPW 324
           +CGNHSG  SLS KVV Q YYWPT+D+DAK+FVK CDNCQ F NIIHQPPELLT ISAPW
Sbjct: 252 VCGNHSGVGSLSAKVVQQGYYWPTVDQDAKQFVKACDNCQRFANIIHQPPELLTPISAPW 311

[Close]
BLAST of Moc06g31520 vs. NCBI nr
Match: XP_022155184.1 (uncharacterized protein LOC111022318 [Momordica charantia])

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-39
Identity = 75/101 (74.26%), Postives = 85/101 (84.16%), Query Frame = 0 

Query: 222 IVRYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYY 281
           +VR++ +DG +YR GFSLPL KC   EEG Y+LREIHEG+CGNHSGARSLS KVV Q +Y
Sbjct: 226 VVRFILRDGALYRRGFSLPLLKCVTPEEGIYILREIHEGVCGNHSGARSLSAKVVRQWFY 285

Query: 282 WPTIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPWPF 323
           WPTI +DAK+FVKTCDNCQ F NIIHQ PELLT ISAPWPF
Sbjct: 286 WPTIKQDAKQFVKTCDNCQGFANIIHQLPELLTPISAPWPF 326

[Close]
BLAST of Moc06g31520 vs. NCBI nr
Match: XP_022158860.1 (uncharacterized protein LOC111025322 [Momordica charantia])

HSP 1 Score: 172.9 bits (437), Expect = 4.4e-39
Identity = 75/99 (75.76%), Postives = 83/99 (83.84%), Query Frame = 0 

Query: 224 RYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYYWP 283
           R++ QDG +YR  FSLPL KC   EEG YVLREIHEG+CGNHSGARSLS KVV Q YYWP
Sbjct: 287 RFVIQDGALYRRSFSLPLLKCVTLEEGLYVLREIHEGVCGNHSGARSLSAKVVRQGYYWP 346

Query: 284 TIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPWPF 323
           T+D+DAK+FV+TCDNCQ F NIIH PPELLT ISAPWPF
Sbjct: 347 TLDQDAKKFVRTCDNCQCFRNIIHHPPELLTPISAPWPF 385

[Close]
BLAST of Moc06g31520 vs. ExPASy TrEMBL
Match: A0A6J1DWA1 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024661 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-41
Identity = 76/100 (76.00%), Postives = 86/100 (86.00%), Query Frame = 0 

Query: 224 RYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYYWP 283
           R++ +DGV+YR GFSLPL KC   EEG Y+LREIHEG+CGNHSGARSLS KVV Q YYWP
Sbjct: 323 RFILRDGVLYRRGFSLPLLKCVTPEEGLYILREIHEGVCGNHSGARSLSAKVVRQGYYWP 382

Query: 284 TIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPWPFA 324
           T++ DAK+FVKTCDNCQ F +IIHQPPELLT ISAPWPFA
Sbjct: 383 TVEHDAKQFVKTCDNCQRFASIIHQPPELLTPISAPWPFA 422

[Close]
BLAST of Moc06g31520 vs. ExPASy TrEMBL
Match: A0A6J1C878 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111008330 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 8.6e-41
Identity = 84/147 (57.14%), Postives = 106/147 (72.11%), Query Frame = 0 

Query: 182 DDRIVLPSEDEQLKSNQREVVTPIEE-LELVPLLCLEKQVNI----VRYLFQDGVMYRHG 241
           D+  +L  +  Q+ +     + PI E ++  PLL L++Q  +      ++ +DG +YR G
Sbjct: 249 DNLSILEPDVMQVDTPVPSWIDPIVEFIKGTPLLDLKEQKKMAWKAAWFILRDGALYRRG 308

Query: 242 FSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYYWPTIDRDAKEFVKTC 301
           FSLPL KC   EE  Y++REIHEG+CGNHSGARSLS KVV Q YYWPT+++DAK+FVKTC
Sbjct: 309 FSLPLLKCVTPEEDLYIIREIHEGVCGNHSGARSLSAKVVRQGYYWPTVEQDAKQFVKTC 368

Query: 302 DNCQHFVNIIHQPPELLTLISAPWPFA 324
           DNCQ F NIIHQPPELLTLI APWPFA
Sbjct: 369 DNCQRFTNIIHQPPELLTLILAPWPFA 395

[Close]
BLAST of Moc06g31520 vs. ExPASy TrEMBL
Match: A0A6J1DM02 (uncharacterized protein LOC111021681 OS=Momordica charantia OX=3673 GN=LOC111021681 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.3e-40
Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 0 

Query: 205 IEELELVPLLCLEKQVNI----VRYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEG 264
           +E ++  PLL  ++Q  +     R++ +DG +YR GFSLPL KC   EEG Y+LREIHEG
Sbjct: 192 VEFIKGNPLLDSKEQKKMARKAARFILRDGALYRRGFSLPLIKCVTPEEGIYILREIHEG 251

Query: 265 ICGNHSGARSLSTKVVHQDYYWPTIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPW 324
           +CGNHSG  SLS KVV Q YYWPT+D+DAK+FVK CDNCQ F NIIHQPPELLT ISAPW
Sbjct: 252 VCGNHSGVGSLSAKVVQQGYYWPTVDQDAKQFVKACDNCQRFANIIHQPPELLTPISAPW 311

[Close]
BLAST of Moc06g31520 vs. ExPASy TrEMBL
Match: A0A6J1DPI3 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111022318 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.6e-39
Identity = 75/101 (74.26%), Postives = 85/101 (84.16%), Query Frame = 0 

Query: 222 IVRYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYY 281
           +VR++ +DG +YR GFSLPL KC   EEG Y+LREIHEG+CGNHSGARSLS KVV Q +Y
Sbjct: 226 VVRFILRDGALYRRGFSLPLLKCVTPEEGIYILREIHEGVCGNHSGARSLSAKVVRQWFY 285

Query: 282 WPTIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPWPF 323
           WPTI +DAK+FVKTCDNCQ F NIIHQ PELLT ISAPWPF
Sbjct: 286 WPTIKQDAKQFVKTCDNCQGFANIIHQLPELLTPISAPWPF 326

[Close]
BLAST of Moc06g31520 vs. ExPASy TrEMBL
Match: A0A6J1DX12 (uncharacterized protein LOC111025322 OS=Momordica charantia OX=3673 GN=LOC111025322 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-39
Identity = 75/99 (75.76%), Postives = 83/99 (83.84%), Query Frame = 0 

Query: 224 RYLFQDGVMYRHGFSLPLFKCTLEEEGYYVLREIHEGICGNHSGARSLSTKVVHQDYYWP 283
           R++ QDG +YR  FSLPL KC   EEG YVLREIHEG+CGNHSGARSLS KVV Q YYWP
Sbjct: 287 RFVIQDGALYRRSFSLPLLKCVTLEEGLYVLREIHEGVCGNHSGARSLSAKVVRQGYYWP 346

Query: 284 TIDRDAKEFVKTCDNCQHFVNIIHQPPELLTLISAPWPF 323
           T+D+DAK+FV+TCDNCQ F NIIH PPELLT ISAPWPF
Sbjct: 347 TLDQDAKKFVRTCDNCQCFRNIIHHPPELLTPISAPWPF 385

The following BLAST results are available for this feature:
BLAST of Moc06g31520 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158092.13.6e-4176.00uncharacterized protein LOC111024661 [Momordica charantia][more]
XP_022136678.11.8e-4057.14uncharacterized protein LOC111008330 [Momordica charantia][more]
XP_022154404.16.7e-4064.23uncharacterized protein LOC111021681 [Momordica charantia][more]
XP_022155184.13.3e-3974.26uncharacterized protein LOC111022318 [Momordica charantia][more]
XP_022158860.14.4e-3975.76uncharacterized protein LOC111025322 [Momordica charantia][more]
BLAST of Moc06g31520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g31520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DWA11.7e-4176.00Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024661 PE=4 SV=1[more]
A0A6J1C8788.6e-4157.14Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111008330 PE=4 SV=1[more]
A0A6J1DM023.3e-4064.23uncharacterized protein LOC111021681 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1DPI31.6e-3974.26Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111022318 PE=4 SV=1[more]
A0A6J1DX122.1e-3975.76uncharacterized protein LOC111025322 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc06g31520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 253..301
e-value: 9.5E-11
score: 41.6
NoneNo IPR availableGENE3D1.10.340.70coord: 215..301
e-value: 5.0E-14
score: 54.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g31520.1Moc06g31520.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0030430 host cell cytoplasm
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity