Moc06g31350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g31350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr6: 23585131 .. 23585966 (-)
RNA-Seq Expression	Moc06g31350
Synteny	Moc06g31350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCAAGAAATTTGTGGGAAAGCCCAGGACCAGCTCGGCAGAGAAAAAGGAAGAGCGGAAGCGTTCGAGGACGCCGCCCCGGCGCACTGACCAACCTGCGGTCATCAATACCATTTTTGGAGGGCCAAGTGGGGGGTCAGTCCGGACATAAAAGAAAGGAGTTAGCCGTGCAGCCAGGCGTGAGGTGTGCATCATCAGGGAGGAGAGGCCGACCTGCTGAATCACCTTCGACGGTGCAGACTTGAAGGAGGTCCACCTGCCCCACAATGATGCACTTGTGATTGCTCCCTTGATTGATCATGTGGTGGTCAGGAGGGTGCTGGTAGACGGAGGCGCATCTGCTAACATCCTGTCCTTACCGACCTACCTCGCCTTGGGATGGACGAGGTCGCAATTGAAGAAAAGCCCGACACCGCTGGTTAGGTTCTCTGGAGAATCGGTCATCCCAGAGGGTTGCATCGACTTGCCGGTCACGCTTGGGCAGGACCAAACTCAGGTCACCCAAATGGCCGAGTTCGTGTGATTGACGGTAGATCGGCCTATAACGCCATCTTTGGGAGACCTATCATCCACTCATTCCGGGCCATTCCCTCGACACTTCATCAAGTTTTGAAGTATTCCCCCCAATGGCGTTGGCACGGTCCGAGGAGAACAGACCGCTTCAAGGGAGTGCTATGCCTCCGCACTCAAAGGCTCATCGGTCTGCGCCCTTGAAACTCTCGCCAGTAGGGATGGGACGCTCGAGTTCAAGGCCGACCTGCCGAGGAGGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGAGAAGTAA

mRNA sequence

ATGGCTACTTCAAGAAATTTGTGGGAAAGCCCAGGACCAGCTCGGCAGAGAAAAAGGAAGAGCGGAAGCGTTCGAGGACGCCGCCCCGGCGCACTGACCAACCTGCGGTCATCAATACCATTTTTGGAGGGCCAAGTGGGGGGTCAGTCCGGACATAAAAGAAAGGAGTTAGCCGTGCAGCCAGGCGTGAGGAGGGTGCTGGTAGACGGAGGCGCATCTGCTAACATCCTGTCCTTACCGACCTACCTCGCCTTGGGATGGACGAGGTCGCAATTGAAGAAAAGCCCGACACCGCTGGTTAGGTTCTCTGGAGAATCGGTCATCCCAGAGGGTTGCATCGACTTGCCGGTCACGCTTGGGCAGGACCAAACTCAGACCGCTTCAAGGGAGTGCTATGCCTCCGCACTCAAAGGCTCATCGGTCTGCGCCCTTGAAACTCTCGCCAGTAGGGATGGGACGCTCGAGTTCAAGGCCGACCTGCCGAGGAGGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGAGAAGTAA

Coding sequence (CDS)

ATGGCTACTTCAAGAAATTTGTGGGAAAGCCCAGGACCAGCTCGGCAGAGAAAAAGGAAGAGCGGAAGCGTTCGAGGACGCCGCCCCGGCGCACTGACCAACCTGCGGTCATCAATACCATTTTTGGAGGGCCAAGTGGGGGGTCAGTCCGGACATAAAAGAAAGGAGTTAGCCGTGCAGCCAGGCGTGAGGAGGGTGCTGGTAGACGGAGGCGCATCTGCTAACATCCTGTCCTTACCGACCTACCTCGCCTTGGGATGGACGAGGTCGCAATTGAAGAAAAGCCCGACACCGCTGGTTAGGTTCTCTGGAGAATCGGTCATCCCAGAGGGTTGCATCGACTTGCCGGTCACGCTTGGGCAGGACCAAACTCAGACCGCTTCAAGGGAGTGCTATGCCTCCGCACTCAAAGGCTCATCGGTCTGCGCCCTTGAAACTCTCGCCAGTAGGGATGGGACGCTCGAGTTCAAGGCCGACCTGCCGAGGAGGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGAGAAGTAA

Protein sequence

MATSRNLWESPGPARQRKRKSGSVRGRRPGALTNLRSSIPFLEGQVGGQSGHKRKELAVQPGVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLGQDQTQTASRECYASALKGSSVCALETLASRDGTLEFKADLPRREFAAPTEELELVPLLSPEK

Homology

[Close]

BLAST of Moc06g31350 vs. NCBI nr
Match: XP_022152110.1 (uncharacterized protein LOC111019899 [Momordica charantia])

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-46
Identity = 130/263 (49.43%), Postives = 139/263 (52.85%), Query Frame = 0


Query: 18  KRKSGSVRGRRPGALTNLRSSI-PFLEGQVGGQSGHKRKELA------------------ 77
           ++K    R R P   T+  + I     G  GGQSGHKRK+LA                  
Sbjct: 175 EKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKKLARAARREVCIIREQRPTCP 234

Query: 78  --------------------VQP-----GVRRVLVDGGASANILSLPTYLALGWTRSQLK 137
                               + P      VRRVLVDGGASANILSLPTYLALGWTRSQLK
Sbjct: 235 ITFDXADLXEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPTYLALGWTRSQLK 294

Query: 138 KSPTPLVRFSGESVIPEGCIDLPVTLGQDQT----------------------------- 183
           KSPTPLV FSGESV+PEGCIDLPVTLGQDQT                             
Sbjct: 295 KSPTPLVGFSGESVVPEGCIDLPVTLGQDQTRVTQMAEFVVVDGRSAYNAIFGRPIIHSF 354

[Close]

BLAST of Moc06g31350 vs. NCBI nr
Match: XP_022157676.1 (uncharacterized protein LOC111024332 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-46
Identity = 134/275 (48.73%), Postives = 143/275 (52.00%), Query Frame = 0


Query: 13  PARQRKRKSGSV-------RGRRPGALTNLRSSI-PFLEGQVGGQSGHKRKELAVQPG-- 72
           P R+ K K+ S        R R P   T+  + I     G  GGQSGHKRKELA +    
Sbjct: 123 PERRSKDKTSSAEKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKELAREARRE 182

Query: 73  -----------------------------------------VRRVLVDGGASANILSLPT 132
                                                    VRRVLVDGGASANILSLPT
Sbjct: 183 VCIIREQGPTCPITFDGADLEEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPT 242

Query: 133 YLALGWTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLGQDQT----------------- 183
           YLALGWTRSQLK+SPTPLV FSGESVIPEGCIDLPVTLGQDQT                 
Sbjct: 243 YLALGWTRSQLKRSPTPLVGFSGESVIPEGCIDLPVTLGQDQTRVTQMTEFVVVDGRSTY 302

[Close]

BLAST of Moc06g31350 vs. NCBI nr
Match: XP_022155866.1 (uncharacterized protein LOC111022880 [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 2.2e-43
Identity = 129/270 (47.78%), Postives = 143/270 (52.96%), Query Frame = 0


Query: 11  PGPARQRKRKSGSVRGRRPGALTNLRSSI-PFLEGQVGGQSGHKRKELA----------V 70
           PG +   K++    R R P   T+  + I     G  GGQSGHKRKELA           
Sbjct: 60  PGTSSAEKKEERK-RSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKELARAARREVCIIR 119

Query: 71  QPG---------------------------------VRRVLVDGGASANILSLPTYLALG 130
           + G                                 VRRVLV+GGASANILSLPTYLALG
Sbjct: 120 EQGPTCPITFDGADLEEVHLPHNDALMIALLIDHVVVRRVLVNGGASANILSLPTYLALG 179

Query: 131 WTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLGQDQT---------------------- 183
           WTRSQL++SPTPLV FSGESVIPEGCIDLPVTLGQ+QT                      
Sbjct: 180 WTRSQLRRSPTPLVGFSGESVIPEGCIDLPVTLGQNQTRITQMAEFVVVDGRSVYNAIFG 239

[Close]

BLAST of Moc06g31350 vs. NCBI nr
Match: XP_022150760.1 (uncharacterized protein LOC111018823 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 119/232 (51.29%), Postives = 122/232 (52.59%), Query Frame = 0


Query: 44  GQVGGQSGHKRKELA--------------------------------------VQP---- 103
           G  GGQSGHKRKELA                                      + P    
Sbjct: 339 GPSGGQSGHKRKELARAARREVCIIREQRPTCPITFDSADLEEVHLPHNDALVIAPLIDH 398

Query: 104 -GVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLG 163
             VRRVLVD G SANI+SL TYLALGWTRSQLKKS TPLV FS ESVIPEGCIDLPVTLG
Sbjct: 399 VVVRRVLVDEGVSANIVSLLTYLALGWTRSQLKKSTTPLVGFSRESVIPEGCIDLPVTLG 458

Query: 164 QDQTQT------------------------------------------------------ 179
            DQTQ                                                       
Sbjct: 459 HDQTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVGMVRGEQI 518

[Close]

BLAST of Moc06g31350 vs. NCBI nr
Match: XP_022156024.1 (uncharacterized protein LOC111022993 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 5.3e-34
Identity = 93/154 (60.39%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 14  ARQRKRKSGSVRGRRPGALTNLRSSIPFLEGQVGGQSGHKRKELAVQP-----GVRRVLV 73
           AR+ KR+   +R ++P        SI F +  + G        L + P      VRRVLV
Sbjct: 220 AREAKREVCIIRDQKP------TCSITFDDTDLEGVHLPHNDALVIAPLIDHVLVRRVLV 279

Query: 74  DGGASANILSLPTYLALGWTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLGQDQTQTAS 133
           DGGASANILSLPTYLALGWTRSQLKKSPTPLV FSGESV PEGC+DLPVT+GQD TQ   
Sbjct: 280 DGGASANILSLPTYLALGWTRSQLKKSPTPLVGFSGESVSPEGCVDLPVTIGQDSTQ--- 339

Query: 134 RECYASALKGSSVCALETLASRDGTLEFKADLPR 163
            ECYASALK SSVCALE  A+ D  LE +ADLP+
Sbjct: 340 -ECYASALKRSSVCALEEQANWDELLEPEADLPK 363

[Close]

BLAST of Moc06g31350 vs. ExPASy TrEMBL
Match: A0A6J1DD03 (uncharacterized protein LOC111019899 OS=Momordica charantia OX=3673 GN=LOC111019899 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.7e-46
Identity = 130/263 (49.43%), Postives = 139/263 (52.85%), Query Frame = 0


Query: 18  KRKSGSVRGRRPGALTNLRSSI-PFLEGQVGGQSGHKRKELA------------------ 77
           ++K    R R P   T+  + I     G  GGQSGHKRK+LA                  
Sbjct: 175 EKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKKLARAARREVCIIREQRPTCP 234

Query: 78  --------------------VQP-----GVRRVLVDGGASANILSLPTYLALGWTRSQLK 137
                               + P      VRRVLVDGGASANILSLPTYLALGWTRSQLK
Sbjct: 235 ITFDXADLXEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPTYLALGWTRSQLK 294

Query: 138 KSPTPLVRFSGESVIPEGCIDLPVTLGQDQT----------------------------- 183
           KSPTPLV FSGESV+PEGCIDLPVTLGQDQT                             
Sbjct: 295 KSPTPLVGFSGESVVPEGCIDLPVTLGQDQTRVTQMAEFVVVDGRSAYNAIFGRPIIHSF 354

[Close]

BLAST of Moc06g31350 vs. ExPASy TrEMBL
Match: A0A6J1DYW5 (uncharacterized protein LOC111024332 OS=Momordica charantia OX=3673 GN=LOC111024332 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.2e-46
Identity = 134/275 (48.73%), Postives = 143/275 (52.00%), Query Frame = 0


Query: 13  PARQRKRKSGSV-------RGRRPGALTNLRSSI-PFLEGQVGGQSGHKRKELAVQPG-- 72
           P R+ K K+ S        R R P   T+  + I     G  GGQSGHKRKELA +    
Sbjct: 123 PERRSKDKTSSAEKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKELAREARRE 182

Query: 73  -----------------------------------------VRRVLVDGGASANILSLPT 132
                                                    VRRVLVDGGASANILSLPT
Sbjct: 183 VCIIREQGPTCPITFDGADLEEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPT 242

Query: 133 YLALGWTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLGQDQT----------------- 183
           YLALGWTRSQLK+SPTPLV FSGESVIPEGCIDLPVTLGQDQT                 
Sbjct: 243 YLALGWTRSQLKRSPTPLVGFSGESVIPEGCIDLPVTLGQDQTRVTQMTEFVVVDGRSTY 302

[Close]

BLAST of Moc06g31350 vs. ExPASy TrEMBL
Match: A0A6J1DT04 (uncharacterized protein LOC111022880 OS=Momordica charantia OX=3673 GN=LOC111022880 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.0e-43
Identity = 129/270 (47.78%), Postives = 143/270 (52.96%), Query Frame = 0


Query: 11  PGPARQRKRKSGSVRGRRPGALTNLRSSI-PFLEGQVGGQSGHKRKELA----------V 70
           PG +   K++    R R P   T+  + I     G  GGQSGHKRKELA           
Sbjct: 60  PGTSSAEKKEERK-RSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKELARAARREVCIIR 119

Query: 71  QPG---------------------------------VRRVLVDGGASANILSLPTYLALG 130
           + G                                 VRRVLV+GGASANILSLPTYLALG
Sbjct: 120 EQGPTCPITFDGADLEEVHLPHNDALMIALLIDHVVVRRVLVNGGASANILSLPTYLALG 179

Query: 131 WTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLGQDQT---------------------- 183
           WTRSQL++SPTPLV FSGESVIPEGCIDLPVTLGQ+QT                      
Sbjct: 180 WTRSQLRRSPTPLVGFSGESVIPEGCIDLPVTLGQNQTRITQMAEFVVVDGRSVYNAIFG 239

[Close]

BLAST of Moc06g31350 vs. ExPASy TrEMBL
Match: A0A6J1D9E1 (uncharacterized protein LOC111018823 OS=Momordica charantia OX=3673 GN=LOC111018823 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 7.5e-42
Identity = 119/232 (51.29%), Postives = 122/232 (52.59%), Query Frame = 0


Query: 44  GQVGGQSGHKRKELA--------------------------------------VQP---- 103
           G  GGQSGHKRKELA                                      + P    
Sbjct: 339 GPSGGQSGHKRKELARAARREVCIIREQRPTCPITFDSADLEEVHLPHNDALVIAPLIDH 398

Query: 104 -GVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLG 163
             VRRVLVD G SANI+SL TYLALGWTRSQLKKS TPLV FS ESVIPEGCIDLPVTLG
Sbjct: 399 VVVRRVLVDEGVSANIVSLLTYLALGWTRSQLKKSTTPLVGFSRESVIPEGCIDLPVTLG 458

Query: 164 QDQTQT------------------------------------------------------ 179
            DQTQ                                                       
Sbjct: 459 HDQTQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRAIPSTLHQVLKYSTPNGVGMVRGEQI 518

[Close]

BLAST of Moc06g31350 vs. ExPASy TrEMBL
Match: A0A6J1DS14 (uncharacterized protein LOC111022993 OS=Momordica charantia OX=3673 GN=LOC111022993 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.6e-34
Identity = 93/154 (60.39%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 14  ARQRKRKSGSVRGRRPGALTNLRSSIPFLEGQVGGQSGHKRKELAVQP-----GVRRVLV 73
           AR+ KR+   +R ++P        SI F +  + G        L + P      VRRVLV
Sbjct: 220 AREAKREVCIIRDQKP------TCSITFDDTDLEGVHLPHNDALVIAPLIDHVLVRRVLV 279

Query: 74  DGGASANILSLPTYLALGWTRSQLKKSPTPLVRFSGESVIPEGCIDLPVTLGQDQTQTAS 133
           DGGASANILSLPTYLALGWTRSQLKKSPTPLV FSGESV PEGC+DLPVT+GQD TQ   
Sbjct: 280 DGGASANILSLPTYLALGWTRSQLKKSPTPLVGFSGESVSPEGCVDLPVTIGQDSTQ--- 339

Query: 134 RECYASALKGSSVCALETLASRDGTLEFKADLPR 163
            ECYASALK SSVCALE  A+ D  LE +ADLP+
Sbjct: 340 -ECYASALKRSSVCALEEQANWDELLEPEADLPK 363

The following BLAST results are available for this feature:

BLAST of Moc06g31350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152110.1	3.5e-46	49.43	uncharacterized protein LOC111019899 [Momordica charantia]	[more]
XP_022157676.1	4.6e-46	48.73	uncharacterized protein LOC111024332 [Momordica charantia]	[more]
XP_022155866.1	2.2e-43	47.78	uncharacterized protein LOC111022880 [Momordica charantia]	[more]
XP_022150760.1	1.5e-41	51.29	uncharacterized protein LOC111018823 [Momordica charantia]	[more]
XP_022156024.1	5.3e-34	60.39	uncharacterized protein LOC111022993 [Momordica charantia]	[more]

BLAST of Moc06g31350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g31350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD03	1.7e-46	49.43	uncharacterized protein LOC111019899 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DYW5	2.2e-46	48.73	uncharacterized protein LOC111024332 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DT04	1.0e-43	47.78	uncharacterized protein LOC111022880 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D9E1	7.5e-42	51.29	uncharacterized protein LOC111018823 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DS14	2.6e-34	60.39	uncharacterized protein LOC111022993 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Moc06g31350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 65..132 e-value: 7.2802E-8 score: 46.1756

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g31350.1	Moc06g31350.1	mRNA