Moc06g30440 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g30440
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr6: 22875811 .. 22880245 (-)
RNA-Seq Expression	Moc06g30440
Synteny	Moc06g30440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGATCACATAACTGATGATCCATCTAAGGATGAGAGCAAGAAAGCTTGGTTGTGGGATAATGCTCGACTGGTTCTGCAGATCAATAATTCGATCGAGGGTGACATTATTGGCTTGGTTAATGAATGTGAGTATGTTAAAGAGTTGCTTAAATATTTAGAATTCCTTTATTCTGGAAAAGGAAATGTTAGTCGAATATTTGAAATCTGCAAGCGCTGCTACCAACCTGAGTTTGGTGACCAATCTCTTACAAATTACTTTATGGAACACAAACGAATTTATGCAGAGTTTAATGCATTACTCCCAGATAGTAATGATCCAAAAGTTCGGCTTGCTCAATGCGAACAACTAACAGTTATCGGTTTTCTTCTTGGTCTTCCAGCTAGATTTGATGTGGCCAAAGACCAATTACTCTCTAGTTCGGAAATTCCAGCTTTAGAGGAGGCATACACTTGAGTACTTCAAGTTGATAAGTCACAACCCGTCTTGTCATCTTAGTCTAATAGTGCTTTGGTTGGACGTAGTACAAATGCAAACAAAGGTAATACCTACCAAGGGAATTCCACGACTTCAAATGCTCAACATTGGAATTCTAGTGCTCCAAAATCAAATTCAGGAGATATTATTTTTTGCAATTATTGCCATAAGCCTAGTCATACAAAACGAGAATCTAGAAAGCTATTGAATAAACGTCAGAAAACACAGTCTGCCCATGTTGCATCTACTTCTGATAATGCTGGCAAGTTAGTTACAATTCCTGCGGAATAATTTGCTAAGTTCCAACAGTATCAAGAGTCATTGACGGCATCGTCCTTTAATCCGATTACCGCCATCACTGAGTCAGGTAACACCAGTAAATGTCTTATTTTCTCCGCATCAAAATGGGTCATTGACTCTGGTGTGACAAATCATATATCAGGTAACCCTAACTTATTTGCTAATTTCTCCCCATCTGCATCTTTGCCTGATGTTACCATAGTAAATGGCACCACTTCTCCTGTTCTTGGCTCTGGCATAGTTCATCTTTCCACATCTCTTTCCCTAACATCTGTCTTAAATTTACCAAAATTTTCTTTTAATTTGATCTCTGTTAGTAAACTCACTCGTTCTTCAATTGTTGTGTCTTATTCTTCCCTGGTTATTGCCTATTTCAGGATCTTACGACGAAGAAGACTATTGGTAAAGGACATGAATCCAATGGCCTCTACACGTTTGATACACAAATACCTACAACTACCATTTGCACTTGAGTACCCTTTCCTTTCGAAGAATCTTGTCGTTTGGGTCATCCATATCTCTCCGTGTTAAAGAGTCTTCGTCCTCAATTTCATAGTTTGCATTCTTTAGATTGTGAGTCATGTCAATTTGCTAAGTTTCATCGTCTTAGTTTATATCCTAGAGTCAATAAATGAGCTACTACCTTTTTTGAATTAGTTCATTCTGATGTTTGGGGTCTTTGACCTATTGAGTCCAAAAGTGGGTTTCGATACTTTATTACCTTTGTCGATGATTTTTCCCGTAACTTGGTTATATTTAATGAAACATCGTTCTGAGTTACTTTCTCATTTTCGTAACTTTCATGCTGAAATTCGAACTCAATTTGGTGGCTCTCTTAAAGTTCTACGAAGTGATGATGCTAAAAAATATTTTTCTGGAGCTCTTGACTCTTATTTGAGTGAATATGGTATTCTTCACCAATCCTCTAGTGTCGATACTCCATCTCAAAATGGAGTTGCAGAAAGAAAAAATAGACATCTTCTCGAAACAGCGGGTCTTAATGTTTCAAATGCATGTTCCAAAATGCTTTTGGGCCGATGCTATTTCGACGACTTGCTTCCTGATTAATCGCATGCCTTCATCAGTTCTTAAGGGTGAGATACCTTATCGTACTCTATGTCCTATGCAACCTTTATTTCCTATTAAACTTAAAATATTTGGTTGCACCTATTTTGTTCGTGATGTTCGCCCTCAGCTCCCCAAATTGGACCCCAAGTCCTTGAAATGCATTTTCCTTGGTTATTCTCGTGTGCAAAAAAGGTATCGATGTTATTGTCCTCATCTCAATAGATATTTTGTCTCTCCCGACGTTACATTCTTTGAAGATACTCCTTTTTCTTCATCTTTGAGTACCAGTCAGGGGAGAGGTCACAAGAAGATGATGACATTCTTGTCTATTTCATTGTCTCTCCTTCTACTGAAGAGCTTCCTAGCAATACATCTTCCTATGTGCTTGATCCTTCTCTTCCCACCATTACTCAAGTTTATTCTCGTCGGCAACCTCCTACGGACTCATGCCCTATACCAACAGCTTCTTCGTCCGAGGATCCAGGAACAAGTGATGACCTTCCTATTGCTCTTAGAAAAGGTAAGCGTAAATGTACTTATCCTGTTTCTTCTTTTGTCTCATATAACCATTTGTCCTCACCTACCTTTTCGTTTCTTGCATCCCTTGAGTCTGTATCTGTTCCTAAAACTGTTCATGAAGCTTTGTCTCATCCTGGTTGGCGAGCTGCTATGTTGGAGGAAATGACTGCCTTAGATGACAATGGTACTTGGGATTTAGTGTCTTTTCCTGCAGGAAAGAAACCTATCAGTTGTAAATGGGTGTTTGCTGTTAAAGTTCATCCTGATGGATCCATTGCCCGTTTGAAAGCTCGCCTTGTTGTTAAAGGATATGTGCAGACTTATGGAATTGTTTATAGTGATACTTTTTCTCCGACTGCTAAATTGGCTTCTGTTAGGTTATTCATTTCCTTGGCATCTATTCACCATTGGACGTTACATCAGCTTGATATTAAAAATGCCTTCCTCCATGGTGATCTTCAAGAGGAAGTGTATATGGAGCAACCACCAGGTTTTGTTGCTCAGGGGGAGAATGGAAAGGTATGTCGTCTTCGTAAATCCTTATATGGGTTGAAACAAAGTCCACGAGAATGGTTTGGAAAATTCAGTCTGGTGGTTGAGAACTTTGGAATGAAGAAGAGTAAGTCGGACCATTCTGTCTTCTATAAACAAACTGAGTCTAGTGTTATCTTACTGGTTGTATATGTTGATGATATTGTGATTACTGGTAATGATTCATCAGGCATCCTATCACTCAAAACTTTCCTTCATAGTCAATTTCATACGAAGGATTTGGGAGTGCTGAAATATTTCTTAGGAATTGAGGTAATAAGGAGCAAGAAGGGGATTCTCTTATCACAGAGGAAATTTGTACTTGACCTGTTAACTGTAACAGGAAAGTTAGCTGCTAAGCCGCGTAGTACCCAAATGATACCTAATTTACAACTTATAAAGGAAGGGGAGTTGTTGAAAGATCCTGAGAAGTATAGGAGATTAGTAGGGAAGCTGAATTATCTTACGGTTACGATGCCAGACATAGTTTATCCAGTCAGTATTATAAGCCAGTTTATGAATTCTCCTACGACTGACCATTGGATCACATTGGAACATATTCTATGTTATTTGAAAGGTGTTCCTGGACGTGGTTTGTTATATAAAGATCATGGTCATCTTAATATTGAATGTGTTTTCAGATGTTGATTGGGCAAGTTCTAAGGAAGATAGAAGATCAACCTCAGGATATTGTGTATTTGTCGGAGGTAATTTAGTTTCTTGGAAAAGTAAGAAATAAAACGTGGTGTCGCGTTCGAGTGCTGAATCAGAATATAAAGCTATGGCACAGTCGGTGTGTGAATTAGTATGGATATATCAGCTTCTGACTGAATTGGGATTTGGCATCACCACTTCAATGAAACTTTGGTGTGATAATCAAGCAGCTCTTCATATTGCATTTAATCGAGTATTTCATGAACGAACCAAACACATTGAAGTTGATTGTCATTATGTACGTGAGAAAATACAACAAGGATTGGTGGCTACAAGGTATGTGAAGACTGGAGAGCAGCTAGGAGATATATTTACTAAAGCATTGAATGGAGCACGAATAGATTGTTTGTCTAACAAGTTGGACATGATTAATATATATGCACCAACTTGAGGGGGAGTGTTAGAGTATAGATATTAGTATATTTTATATTCTTGTATATTCTTGTATTAATATTAATTTGTCCTTTACCTTCCTTATAGGATTAAGTCAACCTTGTATATTTGTCTATATATATAGACTTTAATAATGAGAATACATCACATTGGATTCTCTCCAACCTTAGTCTCTACAATGCTTAGTATATATTAAATTTCTAATGTGCATACATTTTCTTTGTGATAGTGATATGCTTTAAGCAATGCACATCATGACATTAGGGCAATGAACATAATGGCATTAGGGTCAACCAATGAAGAAGAGGATTTCCACTTCAACATGATGAGAACTATCAAGATTCATAAAGATGGAGAACAAGTGGAGAAAGGAACTTCAACGGAACATGAAGACACCAAACATGAGAGCTCCAATTTAGGGATTATTTAG

mRNA sequence

ATGGACGATCACATAACTGATGATCCATCTAAGGATGAGAGCAAGAAAGCTTGGTTGTGGGATAATGCTCGACTGGTTCTGCAGATCAATAATTCGATCGAGGGTGACATTATTGGCTTGGTTAATGAATGTGAGTATGTTAAAGAGTTGCTTAAATATTTAGAATTCCTTTATTCTGGAAAAGGAAATGTTAGTCGAATATTTGAAATCTGCAAGCGCTGCTACCAACCTGAGTTTGGTGACCAATCTCTTACAAATTACTTTATGGAACACAAACGAATTTATGCAGAGTTTAATGCATTACTCCCAGATAGTAATGATCCAAAAGTTCGGCTTGCTCAATGCGAACAACTAACAGTTATCGGTTTTCTTCTTGGTCTTCCAGCTAGATTTGATTCAGGGGAGAGGTCACAAGAAGATGATGACATTCTTGTCTATTTCATTGTCTCTCCTTCTACTGAAGAGCTTCCTAGCAATACATCTTCCTATGTGCTTGATCCTTCTCTTCCCACCATTACTCAAGTTTATTCTCGTCGGCAACCTCCTACGGACTCATGCCCTATACCAACAGCTTCTTCGTCCGAGGATCCAGGAACAAGTGATGACCTTCCTATTGCTCTTAGAAAAGGGTCAACCAATGAAGAAGAGGATTTCCACTTCAACATGATGAGAACTATCAAGATTCATAAAGATGGAGAACAAGTGGAGAAAGGAACTTCAACGGAACATGAAGACACCAAACATGAGAGCTCCAATTTAGGGATTATTTAG

Coding sequence (CDS)

ATGGACGATCACATAACTGATGATCCATCTAAGGATGAGAGCAAGAAAGCTTGGTTGTGGGATAATGCTCGACTGGTTCTGCAGATCAATAATTCGATCGAGGGTGACATTATTGGCTTGGTTAATGAATGTGAGTATGTTAAAGAGTTGCTTAAATATTTAGAATTCCTTTATTCTGGAAAAGGAAATGTTAGTCGAATATTTGAAATCTGCAAGCGCTGCTACCAACCTGAGTTTGGTGACCAATCTCTTACAAATTACTTTATGGAACACAAACGAATTTATGCAGAGTTTAATGCATTACTCCCAGATAGTAATGATCCAAAAGTTCGGCTTGCTCAATGCGAACAACTAACAGTTATCGGTTTTCTTCTTGGTCTTCCAGCTAGATTTGATTCAGGGGAGAGGTCACAAGAAGATGATGACATTCTTGTCTATTTCATTGTCTCTCCTTCTACTGAAGAGCTTCCTAGCAATACATCTTCCTATGTGCTTGATCCTTCTCTTCCCACCATTACTCAAGTTTATTCTCGTCGGCAACCTCCTACGGACTCATGCCCTATACCAACAGCTTCTTCGTCCGAGGATCCAGGAACAAGTGATGACCTTCCTATTGCTCTTAGAAAAGGGTCAACCAATGAAGAAGAGGATTTCCACTTCAACATGATGAGAACTATCAAGATTCATAAAGATGGAGAACAAGTGGAGAAAGGAACTTCAACGGAACATGAAGACACCAAACATGAGAGCTCCAATTTAGGGATTATTTAG

Protein sequence

MDDHITDDPSKDESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSGKGNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTVIGFLLGLPARFDSGERSQEDDDILVYFIVSPSTEELPSNTSSYVLDPSLPTITQVYSRRQPPTDSCPIPTASSSEDPGTSDDLPIALRKGSTNEEEDFHFNMMRTIKIHKDGEQVEKGTSTEHEDTKHESSNLGII

Homology

[Close]

BLAST of Moc06g30440 vs. NCBI nr
Match: AAT38747.2 (Polyprotein, putative [Solanum demissum])

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-38
Identity = 85/168 (50.60%), Postives = 114/168 (67.86%), Query Frame = 0


Query: 2   DDHITDDPSKDESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSGK 61
           DDH+  DP  D++KKAWL D+ARL+LQI NSI+ +++GLVN CE+VKEL+ YLE+LYSGK
Sbjct: 45  DDHLIQDPPTDDAKKAWLRDDARLILQIINSIDNEVVGLVNHCEFVKELMDYLEYLYSGK 104

Query: 62  GNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTVI 121
           GN+SRI+E+ K  Y+ E   +SLT YFME K+ Y E N LLP S D KV+ AQ EQ+ ++
Sbjct: 105 GNLSRIYEVSKAFYRSEKEAKSLTTYFMEFKKTYEELNVLLPFSTDIKVQQAQREQMAIM 164

Query: 122 GFLLGLPARFDSGE----RSQEDDDILVYFIVSPSTEELPSNTSSYVL 166
            FL GLP+ F++ +     S E   +   F     TE  P+N  + VL
Sbjct: 165 SFLAGLPSEFETAKSQILSSSEITSLKDVFSQVLRTESTPANQQTNVL 212

[Close]

BLAST of Moc06g30440 vs. NCBI nr
Match: KAF9689200.1 (hypothetical protein SADUNF_Sadunf01G0066900 [Salix dunnii])

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-37
Identity = 76/133 (57.14%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 2   DDHITDDPSKD-ESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSG 61
           DDH+ DDP  D  +KKAWL D+AR+ LQI NSI+ ++I LVN CE+VK+LL YL FLYSG
Sbjct: 50  DDHLVDDPPSDAAAKKAWLRDDARIFLQIRNSIDTEVISLVNHCEFVKDLLDYLAFLYSG 109

Query: 62  KGNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTV 121
           KGN+SRI+++CK  Y+P+  ++SLT YFM+ KR+Y E N+LLP S D K + +Q EQ+ V
Sbjct: 110 KGNISRIYDVCKEFYRPDKQERSLTEYFMDFKRVYEELNSLLPFSTDVKTQQSQREQMAV 169

Query: 122 IGFLLGLPARFDS 134
           + FL GLP  FD+
Sbjct: 170 MSFLAGLPPEFDA 182

[Close]

BLAST of Moc06g30440 vs. NCBI nr
Match: KAF9662291.1 (hypothetical protein SADUNF_Sadunf18G0037700 [Salix dunnii])

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-37
Identity = 76/133 (57.14%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 2   DDHITDDPSKD-ESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSG 61
           DDH+ DDP  D  +KKAWL D+AR+ LQI NSI+ ++I LVN CE+VK+LL YL FLYSG
Sbjct: 50  DDHLVDDPPSDAAAKKAWLRDDARIFLQIRNSIDTEVISLVNHCEFVKDLLDYLAFLYSG 109

Query: 62  KGNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTV 121
           KGN+SRI+++CK  Y+P+  ++SLT YFM+ KR+Y E N+LLP S D K + +Q EQ+ V
Sbjct: 110 KGNISRIYDVCKEFYRPDKQERSLTEYFMDFKRVYEELNSLLPFSTDVKTQQSQREQMAV 169

Query: 122 IGFLLGLPARFDS 134
           + FL GLP  FD+
Sbjct: 170 MSFLAGLPPEFDA 182

[Close]

BLAST of Moc06g30440 vs. NCBI nr
Match: KAF9661591.1 (hypothetical protein SADUNF_Sadunf19G0084700 [Salix dunnii])

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-37
Identity = 76/133 (57.14%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 2   DDHITDDPSKD-ESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSG 61
           DDH+ DDP  D  +KKAWL D+AR+ LQI NSI+ ++I LVN CE+VK+LL YL FLYSG
Sbjct: 50  DDHLVDDPPSDAAAKKAWLRDDARIFLQIRNSIDTEVISLVNHCEFVKDLLDYLAFLYSG 109

Query: 62  KGNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTV 121
           KGN+SRI+++CK  Y+P+  ++SLT YFM+ KR+Y E N+LLP S D K + +Q EQ+ V
Sbjct: 110 KGNISRIYDVCKEFYRPDKQERSLTEYFMDFKRVYEELNSLLPFSTDVKTQQSQREQMAV 169

Query: 122 IGFLLGLPARFDS 134
           + FL GLP  FD+
Sbjct: 170 MSFLAGLPPEFDA 182

[Close]

BLAST of Moc06g30440 vs. NCBI nr
Match: XP_038882618.1 (uncharacterized protein LOC120073824 [Benincasa hispida])

HSP 1 Score: 166.4 bits (420), Expect = 3.2e-37
Identity = 73/132 (55.30%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1   MDDHITDDPSKDESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSG 60
           MDDHIT++   D +KK W  D++R++LQI NSI+ +I+ LVN CE VK+LL+YL+FLYSG
Sbjct: 45  MDDHITEESPIDANKKIWWRDDSRMLLQIKNSIDREIVELVNHCESVKKLLEYLDFLYSG 104

Query: 61  KGNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTV 120
           K N++R+F++CK  YQP+ G++SLT+YFME K   AEFNAL+P S DPKV +A+CE+L +
Sbjct: 105 KENINRVFDVCKTLYQPDQGEKSLTSYFMEVKNTCAEFNALMPISTDPKVLMARCEKLFI 164

Query: 121 IGFLLGLPARFD 133
           + FL+GL  +++
Sbjct: 165 MSFLVGLAPKYE 176

[Close]

BLAST of Moc06g30440 vs. ExPASy TrEMBL
Match: Q6L3Q0 (Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_42t00018 PE=4 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.9e-39
Identity = 85/168 (50.60%), Postives = 114/168 (67.86%), Query Frame = 0


Query: 2   DDHITDDPSKDESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSGK 61
           DDH+  DP  D++KKAWL D+ARL+LQI NSI+ +++GLVN CE+VKEL+ YLE+LYSGK
Sbjct: 45  DDHLIQDPPTDDAKKAWLRDDARLILQIINSIDNEVVGLVNHCEFVKELMDYLEYLYSGK 104

Query: 62  GNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTVI 121
           GN+SRI+E+ K  Y+ E   +SLT YFME K+ Y E N LLP S D KV+ AQ EQ+ ++
Sbjct: 105 GNLSRIYEVSKAFYRSEKEAKSLTTYFMEFKKTYEELNVLLPFSTDIKVQQAQREQMAIM 164

Query: 122 GFLLGLPARFDSGE----RSQEDDDILVYFIVSPSTEELPSNTSSYVL 166
            FL GLP+ F++ +     S E   +   F     TE  P+N  + VL
Sbjct: 165 SFLAGLPSEFETAKSQILSSSEITSLKDVFSQVLRTESTPANQQTNVL 212

[Close]

BLAST of Moc06g30440 vs. ExPASy TrEMBL
Match: A0A5N5KWB0 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_017504 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.7e-36
Identity = 116/305 (38.03%), Postives = 148/305 (48.52%), Query Frame = 0


Query: 2   DDHITDDPSKD-ESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSG 61
           DDH+ DDP  D  +KKAWL D+AR+ LQI NSI+ ++IGLVN CE+VK LL YL FLYSG
Sbjct: 50  DDHLVDDPPSDAAAKKAWLRDDARIFLQIRNSIDTEVIGLVNHCEFVKNLLDYLAFLYSG 109

Query: 62  KGNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTV 121
           KGN+SRI+++CK  Y PE  D+ LT YFM+ KR+Y E N+LLP S D K + +Q EQ+ V
Sbjct: 110 KGNISRIYDVCKEFYHPEKQDRPLTEYFMDFKRVYEELNSLLPFSTDVKTQQSQREQMAV 169

Query: 122 IGFLL-----------GLPARFDSGERSQEDDD--------------------------- 181
           + FL             L +R  S E  +   D                           
Sbjct: 170 MSFLAEGSRSAPIITSALVSRGTSNEAGRGSHDSRGSRRNTGFQGSWSGGGLGRNTGHNK 229

Query: 182 ILVYFIVSP--------------------------------------------STEE--- 214
           ++ Y+   P                                            S +E   
Sbjct: 230 LVCYYCDEPCHTRRTCWKLNGKPQQQAQVANIATQGINHVSAMSSSNDKSVLVSVDEFAC 289

[Close]

BLAST of Moc06g30440 vs. ExPASy TrEMBL
Match: A0A438DZQ8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3537 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 6.6e-36
Identity = 77/168 (45.83%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 2   DDHITDDPSKDESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSGK 61
           DDH+T++P  D ++K W+ D+ARL LQ+ NSI  DI+GL++ CE+VKEL+ YL+FLYSGK
Sbjct: 45  DDHLTEEPPNDHTRKLWMQDDARLFLQMKNSINSDIVGLLSHCEFVKELMDYLDFLYSGK 104

Query: 62  GNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTVI 121
           GNVS+++++    + PE G +SLT YFM+ K++Y E NAL+P S D +V+ AQ EQ+TV+
Sbjct: 105 GNVSQMYDVWNAFHCPEKGAKSLTAYFMDFKKVYEELNALMPFSPDVRVQQAQWEQMTVM 164

Query: 122 GFLLGLPARFDSGE----RSQEDDDILVYFIVSPSTEELPSNTSSYVL 166
            FL GLP+ F++ +       + D +   F     TE + S+  + VL
Sbjct: 165 SFLSGLPSEFETAKSQILSGSDIDSLQEVFSRVLRTENVSSSQHTNVL 212

[Close]

BLAST of Moc06g30440 vs. ExPASy TrEMBL
Match: A0A438HPS2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2969 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 8.6e-36
Identity = 70/134 (52.24%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 2   DDHITDDPSKDESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSGK 61
           DDH+T++P  D ++K W+ D+ARL+LQ+ NSI  DI+GL + CE+VKEL+ YL+FLYSGK
Sbjct: 45  DDHLTEEPPNDHTRKLWMQDDARLILQMKNSINSDIVGLPSHCEFVKELMDYLDFLYSGK 104

Query: 62  GNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTVI 121
           GNVSR++++    + PE G +SLT YFM+ K++Y E NAL+P S D +V+ AQ EQ+ V+
Sbjct: 105 GNVSRMYDVWNAFHCPEKGAKSLTAYFMDFKKVYEELNALMPFSPDVRVQQAQREQMAVM 164

Query: 122 GFLLGLPARFDSGE 136
            FL GLP+ F++ +
Sbjct: 165 SFLSGLPSEFETAK 178

[Close]

BLAST of Moc06g30440 vs. ExPASy TrEMBL
Match: A5AWD0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019194 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.1e-35
Identity = 70/134 (52.24%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 2   DDHITDDPSKDESKKAWLWDNARLVLQINNSIEGDIIGLVNECEYVKELLKYLEFLYSGK 61
           DDH+T++P  D ++K W+ D+ARL LQ+ NSI  DI+GL++ CE+VKEL+ YL+FLYSGK
Sbjct: 45  DDHLTEEPPNDHTRKLWMQDDARLFLQMKNSINSDIVGLLSHCEFVKELMDYLDFLYSGK 104

Query: 62  GNVSRIFEICKRCYQPEFGDQSLTNYFMEHKRIYAEFNALLPDSNDPKVRLAQCEQLTVI 121
           GNVSR++++    + PE G +SLT YFM+ K++Y E NAL+P S D +V+ AQ EQ+ V+
Sbjct: 105 GNVSRMYDVWNAFHCPEKGAKSLTAYFMDFKKVYEELNALMPFSPDVRVQQAQREQMAVM 164

Query: 122 GFLLGLPARFDSGE 136
            FL GLP+ F++ +
Sbjct: 165 SFLSGLPSEFETAK 178

The following BLAST results are available for this feature:

BLAST of Moc06g30440 vs. NCBI nr


Match Name	E-value	Identity	Description
AAT38747.2	1.0e-38	50.60	Polyprotein, putative [Solanum demissum]	[more]
KAF9689200.1	1.9e-37	57.14	hypothetical protein SADUNF_Sadunf01G0066900 [Salix dunnii]	[more]
KAF9662291.1	1.9e-37	57.14	hypothetical protein SADUNF_Sadunf18G0037700 [Salix dunnii]	[more]
KAF9661591.1	1.9e-37	57.14	hypothetical protein SADUNF_Sadunf19G0084700 [Salix dunnii]	[more]
XP_038882618.1	3.2e-37	55.30	uncharacterized protein LOC120073824 [Benincasa hispida]	[more]

BLAST of Moc06g30440 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g30440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q6L3Q0	4.9e-39	50.60	Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_42t00018 PE=4 SV=2	[more]
A0A5N5KWB0	1.7e-36	38.03	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_017504 PE=4 SV=1	[more]
A0A438DZQ8	6.6e-36	45.83	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438HPS2	8.6e-36	52.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5AWD0	1.1e-35	52.24	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019194 PE=4 SV=1	[more]

BLAST of Moc06g30440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g30440.1	Moc06g30440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding