Moc06g30400 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g30400
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Photosystem II D2 protein
Location	chr6: 22855891 .. 22856829 (+)
RNA-Seq Expression	Moc06g30400
Synteny	Moc06g30400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATAGCCATTGGTAAATTTACCAAAGACGAAAATGATTTATTCGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTAGGAGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTATCTACTCCTGCTAATAGCTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCGGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCTATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTTAG

mRNA sequence

ATGACTATAGCCATTGGTAAATTTACCAAAGACGAAAATGATTTATTCGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTAGGAGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTATCTACTCCTGCTAATAGCTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCGGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCTATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTTAG

Coding sequence (CDS)

ATGACTATAGCCATTGGTAAATTTACCAAAGACGAAAATGATTTATTCGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTAGGAGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTATCTACTCCTGCTAATAGCTTAGCACACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCGGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCTATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACCTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTTAG

Protein sequence

MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEF

Homology

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BLAST of Moc06g30400 vs. NCBI nr
Match: YP_006503786.1 (photosystem II protein D2 [Datura stramonium] >YP_008563083.1 photosystem II protein D2 [Solanum lycopersicum] >YP_009123152.1 photosystem II protein D2 [Dunalia obovata] >YP_009123346.1 photosystem II protein D2 [Iochroma nitidum] >YP_009123628.1 photosystem II protein D2 [Iochroma stenanthum] >YP_009128176.1 photosystem II protein D2 [Saracha punctata] >YP_009128835.1 photosystem II protein D2 [Iochroma loxense] >YP_009131708.1 photosystem II protein D [Solanum cheesmaniae] >YP_009131791.1 photosystem II protein D [Solanum chilense] >YP_009131874.1 photosystem II protein D [Solanum galapagense] >YP_009131957.1 photosystem II protein D [Solanum habrochaites] >YP_009132040.1 photosystem II protein D [Solanum neorickii] >YP_009132123.1 photosystem II protein D [Solanum peruvianum] >YP_009132206.1 photosystem II protein D [Solanum pimpinellifolium] >YP_009132747.1 photosystem II protein D2 [Dunalia brachyacantha] >YP_009139463.1 photosystem II protein D2 [Dunalia solanacea] >YP_009171777.1 PsbD [Solanum commersonii] >YP_009171863.1 PsbD [Solanum nigrum] >YP_009240594.1 photosystem II protein D2 [Trompettia cardenasiana] >YP_009243211.1 photosystem II protein D2 [Iochroma australe] >YP_009250860.1 photosystem II protein D2 [Iochroma umbellatum] >YP_009252587.1 photosystem II protein D2 [Iochroma lehmannii] >YP_009252843.1 photosystem II protein D2 [Eriolarynx fasciculata] >YP_009253068.1 photosystem II protein D2 [Iochroma ellipticum] >YP_009253383.1 photosystem II protein D2 [Acnistus arborescens] >YP_009380293.1 PsbD [Solanum berthaultii] >YP_009420656.1 photosystem II protein D2 [Solanum dulcamara] >YP_009421352.1 photosystem II protein D2 [Solanum pennellii] >YP_009582251.1 PsbD [Solanum acaule] >YP_009582338.1 PsbD [Solanum demissum] >YP_009584877.1 PsbD [Solanum abancayense] >YP_009584962.1 PsbD [Solanum achacachense] >YP_009585047.1 PsbD [Solanum acroglossum] >YP_009585217.1 PsbD [Solanum albornozii] >YP_009585302.1 PsbD [Solanum ambosinum] >YP_009585387.1 PsbD [Solanum andreanum] >YP_009585472.1 PsbD [Solanum avilesii] >YP_009585557.1 PsbD [Solanum microdontum] >YP_009585642.1 PsbD [Solanum x blanco-galdosii] >YP_009585727.1 PsbD [Solanum stenophyllidium] >YP_009585812.1 PsbD [Solanum brevicaule] >YP_009585897.1 PsbD [Solanum bukasovii] >YP_009585982.1 PsbD [Solanum cajamarquense] >YP_009586067.1 PsbD [Solanum canasense] >YP_009586152.1 PsbD [Solanum cardiophyllum] >YP_009586237.1 PsbD [Solanum chacoense] >YP_009586322.1 PsbD [Solanum chomatophilum] >YP_009586407.1 PsbD [Solanum etuberosum] >YP_009586492.1 PsbD [Solanum stenotomum subsp. goniocalyx] >YP_009586577.1 PsbD [Solanum gourlayi] >YP_009586662.1 PsbD [Solanum stenotomum] >YP_009586747.1 PsbD [Solanum hondelmannii] >YP_009586832.1 PsbD [Solanum venturii] >YP_009586917.1 PsbD [Solanum marinasense] >YP_009587002.1 PsbD [Solanum hypacrarthrum] >YP_009587087.1 PsbD [Solanum incamayoense] >YP_009587172.1 PsbD [Solanum jamesii] >YP_009587257.1 PsbD [Solanum kurtzianum] >YP_009587342.1 PsbD [Solanum laxissimum] >YP_009587427.1 PsbD [Solanum leptophyes] >YP_009587512.1 PsbD [Solanum limbaniense] >YP_009587597.1 PsbD [Solanum medians] >YP_009587682.1 PsbD [Solanum megistacrolobum] >YP_009587767.1 PsbD [Solanum multiinterruptum] >YP_009587852.1 PsbD [Solanum bukasovii f. multidissectum] >YP_009587937.1 PsbD [Solanum palustre] >YP_009588022.1 PsbD [Solanum pampasense] >YP_009588107.1 PsbD [Solanum paucissectum] >YP_009588192.1 PsbD [Solanum phureja] >YP_009588277.1 PsbD [Solanum pinnatisectum] >YP_009588362.1 PsbD [Solanum polyadenium] >YP_009588447.1 PsbD [Solanum sogarandinum] >YP_009588532.1 PsbD [Solanum sparsipilum] >YP_009588617.1 PsbD [Solanum spegazzinii] >YP_009588702.1 PsbD [Solanum tarijense] >YP_009588787.1 PsbD [Solanum verrucosum] >YP_009588872.1 PsbD [Solanum vernei] >YP_009588957.1 PsbD [Solanum violaceimarmoratum] >YP_009630517.1 photosystem II protein D2 [Lycium chinense] >YP_009685406.1 photosystem II protein D2 [Cirsium rhinoceros] >YP_009756275.1 photosystem II protein D2 [Withania coagulans] >YP_009915714.1 PsbD [Solanum stenotomum subsp. goniocalyx] >YP_009915799.1 PsbD [Solanum ahanhuiri] >YP_009915884.1 PsbD [Solanum stenotomum subsp. stenotomum] >YP_009915969.1 PsbD [Solanum tuberosum subsp. andigenum] >YP_009916054.1 PsbD [Solanum x juzepczukii] >YP_009916139.1 PsbD [Solanum chaucha] >YP_009916224.1 PsbD [Solanum x curtilobum] >YP_010027012.1 photosystem II protein D2 [Cirsium japonicum] >YP_538843.1 photosystem II protein D2 [Solanum bulbocastanum] >YP_635634.1 photosystem II protein D2 [Solanum tuberosum] >AP_004923.1 photosystem II protein D2 [Solanum lycopersicum] >Q2MIA5.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Solanum lycopersicum] >Q2MIJ2.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Solanum bulbocastanum] >Q2VEI1.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Solanum tuberosum] >AJE73484.1 photosystem II protein D2 [Cirsium undulatum] >AJE74092.1 photosystem II protein D2 [Cirsium altissimum] >AJE74776.1 photosystem II protein D2 [Cirsium canescens] >AJR30374.1 photosystem II protein D2 [Vassobia breviflora] >AJR32895.1 photosystem II protein D2 [Dunalia spinosa] >AJS14333.1 photosystem II protein D2 [Iochroma calycinum] >AJW75045.1 photosystem II protein D2 [Vassobia dichotoma] >AKZ22944.1 photosystem II protein D2 [Solanum triflorum] >ALN11568.1 photosystem II protein D2 [Iochroma edule] >AMX21592.1 photosystem II protein D2 [Iochroma grandiflorum] >ANC95051.1 photosystem II protein D2 [Dunalia spathulata] >ANC95230.1 photosystem II protein D2 [Iochroma gesnerioides] >ANC96373.1 photosystem II protein D2 [Iochroma albianthum] >ANE20276.1 photosystem II protein D2 [Iochroma confertiflorum] >ATL16734.1 photosystem II protein D2 [Cirsium japonicum var. maackii] >ATL16799.1 photosystem II protein D2 [Cirsium japonicum var. spinosissimum] >ATL23052.1 PsbD [Solanum hougasii] >ATL23139.1 PsbD [Solanum stoloniferum] >QBE87808.1 photosystem II protein D2 [Corbichonia decumbens] >QFR99302.1 photosystem II D2 protein [Withania somnifera] >QGT34727.1 PsbD [Solanum hjertingii] >QGX04307.1 photosystem II protein D2 [Nicandra physalodes] >QWE50216.1 photosystem II subunit D2 [Biophytum sensitivum] >QXL61690.1 photosystem II protein D2 [Litothamnus nitidus] >DAC81840.1 TPA_asm: photosystem II protein D2 [Withania adpressa])

HSP 1 Score: 639.4 bits (1648), Expect = 1.6e-179
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. NCBI nr
Match: AMX21683.1 (photosystem II protein D2 [Iochroma parvifolium])

HSP 1 Score: 639.4 bits (1648), Expect = 1.6e-179
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. NCBI nr
Match: DAC81924.2 (TPA_asm: photosystem II protein D2 [Withania riebeckii])

HSP 1 Score: 639.4 bits (1648), Expect = 1.6e-179
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. NCBI nr
Match: YP_004841778.1 (photosystem II protein D2 [Cucumis melo subsp. melo] >YP_009004039.1 photosystem II protein D2 [Cucumis hystrix] >YP_009317381.1 photosystem II protein D2 [Coccinia grandis] >YP_009325984.1 photosystem II protein D2 [Citrullus lanatus] >YP_009346480.1 photosystem II protein D2 [Cucumis x hytivus] >YP_009348026.1 photosystem II protein D2 [Citrullus mucosospermus] >YP_009420789.1 photosystem II protein D2 [Citrullus colocynthis] >YP_009431552.1 photosystem II protein D2 [Citrullus amarus] >YP_009431637.1 photosystem II protein D2 [Citrullus rehmii] >YP_009456056.1 photosystem II protein D2 [Momordica charantia] >YP_009456141.1 photosystem II protein D2 [Lagenaria siceraria] >YP_009751985.1 photosystem II protein D2 [Cionosicys macranthus] >YP_009752322.1 photosystem II protein D2 [Bryonia marmorata] >YP_009860068.1 photosystem II protein D2 [Cucumis melo subsp. agrestis] >YP_009945412.1 photosystem II protein D2 [Sechium edule] >YP_010131089.1 photosystem II protein D2 [Benincasa hispida] >YP_247594.1 photosystem II protein D2 [Cucumis sativus] >Q4VZN8.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Cucumis sativus] >ALF03296.1 photosystem II protein D2 [Cucumis sativus var. hardwickii] >ALO21958.1 PsbD [Cucurbita cordata] >ALO21964.1 PsbD [Cucurbita digitata] >ALO22105.1 PsbD [Cucurbita ficifolia] >ALO22173.1 PsbD [Cucurbita foetidissima] >ALO22881.1 PsbD [Cucurbita pedatifolia] >APW82456.1 photosystem II protein D2 [Citrullus lanatus subsp. vulgaris] >ASY96624.1 photosystem II protein D2 [Cucumis melo var. conomon] >ASY96712.1 photosystem II protein D2 [Cucumis melo var. makuwa] >ASY96799.1 photosystem II protein D2 [Cucumis melo var. momordica] >ASY96886.1 photosystem II protein D2 [Cucumis melo var. dudaim] >ASY96973.1 photosystem II protein D2 [Cucumis melo var. cantalupo] >ASY97147.1 photosystem II protein D2 [Cucumis melo var. inodorus] >ASY97321.1 photosystem II protein D2 [Cucumis melo var. flexuosus] >AVE15326.1 PsbD [Cucumis sativus var. sativus] >QIT04045.1 photosystem II protein D2 [Luffa aegyptiaca] >QJF46378.1 photosystem II protein D2 [Cucumis melo] >QKX48468.1 photosystem II protein D2 [Luffa acutangula] >QNM38526.1 photosystem II protein D2 [Lagenaria siceraria var. microcarpa] >QZL38588.1 photosystem II protein D2 [Citrullus naudinianus] >QZL38676.1 photosystem II protein D2 [Citrullus ecirrhosus])

HSP 1 Score: 639.0 bits (1647), Expect = 2.1e-179
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIA+GKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. NCBI nr
Match: YP_009447530.1 (photosystem II protein D2 [Cucurbita moschata] >YP_009505075.1 photosystem II protein D2 [Cucurbita pepo] >YP_009751901.1 photosystem II protein D2 [Cyclanthera pedata] >ALO21745.1 PsbD [Cucurbita argyrosperma] >ALO21771.1 PsbD [Cucurbita argyrosperma var. palmeri] >ALO21860.1 PsbD [Cucurbita argyrosperma subsp. sororia] >ALO22068.1 PsbD [Cucurbita ecuadorensis] >ALO22271.1 PsbD [Cucurbita lundelliana] >ALO22411.1 PsbD [Cucurbita okeechobeensis] >ALO22525.1 PsbD [Cucurbita okeechobeensis subsp. martinezii] >ALO22558.1 PsbD [Cucurbita pepo subsp. fraterna] >ALO22652.1 PsbD [Cucurbita pepo subsp. ovifera] >ALO22682.1 PsbD [Cucurbita pepo var. ozarkana] >ALO22789.1 PsbD [Cucurbita pepo subsp. pepo] >ALO22833.1 PsbD [Cucurbita pepo var. texana])

HSP 1 Score: 638.6 bits (1646), Expect = 2.7e-179
Identity = 309/312 (99.04%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIA+GKFTKDENDLFD+MDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDENDLFDVMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy Swiss-Prot
Match: Q2MIJ2 (Photosystem II D2 protein OS=Solanum bulbocastanum OX=147425 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 2.1e-182
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy Swiss-Prot
Match: Q2MIA5 (Photosystem II D2 protein OS=Solanum lycopersicum OX=4081 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 2.1e-182
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy Swiss-Prot
Match: Q2VEI1 (Photosystem II D2 protein OS=Solanum tuberosum OX=4113 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 2.1e-182
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy Swiss-Prot
Match: Q4VZN8 (Photosystem II D2 protein OS=Cucumis sativus OX=3659 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 2.7e-182
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIA+GKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAVGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy Swiss-Prot
Match: P69685 (Photosystem II D2 protein OS=Antirrhinum majus OX=4151 GN=psbD PE=1 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 3.6e-182
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIA+GKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy TrEMBL
Match: A0A482BUW6 (Photosystem II D2 protein OS=Solanum megistacrolobum OX=445678 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 7.7e-180
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy TrEMBL
Match: A0A482CDN6 (Photosystem II D2 protein OS=Solanum violaceimarmoratum OX=315348 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 7.7e-180
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy TrEMBL
Match: A0A0C5CUN5 (Photosystem II D2 protein OS=Solanum lycopersicum OX=4081 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 7.7e-180
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy TrEMBL
Match: A0A482BD61 (Photosystem II D2 protein OS=Solanum cardiophyllum OX=160510 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 7.7e-180
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. ExPASy TrEMBL
Match: A0A482B807 (Photosystem II D2 protein OS=Solanum avilesii OX=315334 GN=psbD PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 7.7e-180
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY
Sbjct: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. TAIR 10
Match: ATCG00270.1 (photosystem II reaction center protein D )

HSP 1 Score: 630.9 bits (1626), Expect = 5.3e-181
Identity = 306/312 (98.08%), Postives = 308/312 (98.72%), Query Frame = 0


Query: 1   MTIAIGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWY 60
           MTIA+GKFTKDE DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFA+GGWFTGTTFVTSWY
Sbjct: 1   MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60

Query: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120
           THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLW FVALHGA
Sbjct: 61  THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGA 120

Query: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180
           F LIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
Sbjct: 121 FALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180

Query: 181 RFILFFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240
           RFILFFQGFHNWTLN FHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240

Query: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300
           AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
Sbjct: 241 AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV 300

Query: 301 SQEIRAAEDPEF 313
           SQEIRAAEDPEF
Sbjct: 301 SQEIRAAEDPEF 312

[Close]

BLAST of Moc06g30400 vs. TAIR 10
Match: ATCG00020.1 (photosystem II reaction center protein A )

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-36
Identity = 88/298 (29.53%), Postives = 156/298 (52.35%), Query Frame = 0


Query: 10  KDENDLFDIMDDWL-RRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 69
           ++   L+    +W+   +  +++GW G+L+ P    A   +             G+    
Sbjct: 8   RESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67

Query: 70  ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLI 129
           + S L G N ++ A+   + ++      +W          W   GG +  + LH   G+ 
Sbjct: 68  SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 127

Query: 130 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 189
            +M R++EL+  + +RP+ A+A+S P+A   +VFLIYP+GQ  +      G++  F F++
Sbjct: 128 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 187

Query: 190 FFQGFHNWTLNLFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 249
            FQ  HN  ++ FHM+GVAGV G +L  A+HG+ V ++L  E  +  +    +   Q EE
Sbjct: 188 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 247

Query: 250 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 300
           TY++V A+ ++ ++     +F+N R LHFF+   PV G+W +ALG+  +A NL  ++F
Sbjct: 248 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

The following BLAST results are available for this feature:

BLAST of Moc06g30400 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_006503786.1	1.6e-179	99.68	photosystem II protein D2 [Datura stramonium] >YP_008563083.1 photosystem II pro...	[more]
AMX21683.1	1.6e-179	99.68	photosystem II protein D2 [Iochroma parvifolium]	[more]
DAC81924.2	1.6e-179	99.68	TPA_asm: photosystem II protein D2 [Withania riebeckii]	[more]
YP_004841778.1	2.1e-179	99.36	photosystem II protein D2 [Cucumis melo subsp. melo] >YP_009004039.1 photosystem...	[more]
YP_009447530.1	2.7e-179	99.04	photosystem II protein D2 [Cucurbita moschata] >YP_009505075.1 photosystem II pr...	[more]

BLAST of Moc06g30400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2MIJ2	2.1e-182	99.68	Photosystem II D2 protein OS=Solanum bulbocastanum OX=147425 GN=psbD PE=3 SV=1	[more]
Q2MIA5	2.1e-182	99.68	Photosystem II D2 protein OS=Solanum lycopersicum OX=4081 GN=psbD PE=3 SV=1	[more]
Q2VEI1	2.1e-182	99.68	Photosystem II D2 protein OS=Solanum tuberosum OX=4113 GN=psbD PE=3 SV=1	[more]
Q4VZN8	2.7e-182	99.36	Photosystem II D2 protein OS=Cucumis sativus OX=3659 GN=psbD PE=3 SV=1	[more]
P69685	3.6e-182	99.36	Photosystem II D2 protein OS=Antirrhinum majus OX=4151 GN=psbD PE=1 SV=1	[more]

BLAST of Moc06g30400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A482BUW6	7.7e-180	99.68	Photosystem II D2 protein OS=Solanum megistacrolobum OX=445678 GN=psbD PE=3 SV=1	[more]
A0A482CDN6	7.7e-180	99.68	Photosystem II D2 protein OS=Solanum violaceimarmoratum OX=315348 GN=psbD PE=3 S...	[more]
A0A0C5CUN5	7.7e-180	99.68	Photosystem II D2 protein OS=Solanum lycopersicum OX=4081 GN=psbD PE=3 SV=1	[more]
A0A482BD61	7.7e-180	99.68	Photosystem II D2 protein OS=Solanum cardiophyllum OX=160510 GN=psbD PE=3 SV=1	[more]
A0A482B807	7.7e-180	99.68	Photosystem II D2 protein OS=Solanum avilesii OX=315334 GN=psbD PE=3 SV=1	[more]

BLAST of Moc06g30400 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00270.1	5.3e-181	98.08	photosystem II reaction center protein D	[more]
ATCG00020.1	6.1e-36	29.53	photosystem II reaction center protein A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PRINTS	PR00256	REACTNCENTRE	coord: 109..137 score: 26.44 coord: 142..164 score: 27.54 coord: 197..223 score: 33.69
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 29..298 e-value: 7.1E-72 score: 241.8
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	PHOTOSYSTEM II PROTEIN D1	coord: 3..308
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	1.20.85.10		coord: 142..304 e-value: 7.9E-44 score: 151.2
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 16..312
IPR005868	Photosystem II D2 protein	TIGRFAM	TIGR01152	TIGR01152	coord: 1..312 e-value: 3.1E-209 score: 692.3
IPR005868	Photosystem II D2 protein	HAMAP	MF_01383	PSII_PsbD_D2	coord: 1..312 score: 50.508495
None	No IPR available	PANTHER	PTHR33149:SF7	PHOTOSYSTEM II D2 PROTEIN	coord: 3..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g30400.1	Moc06g30400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0015979	photosynthesis
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0010242	oxygen evolving activity