Moc06g29970 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g29970
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Locationchr6: 22534426 .. 22541377 (+)
RNA-Seq ExpressionMoc06g29970
SyntenyMoc06g29970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGATATGAACCAAGGAGCTACCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACTTCAACCAGCTTTGCTACTTCATGTCCAAGCGTTCTTGAACTCGACAAGAGAAATAAAGGGAGATGTGCAAGAAGTTAGAACTATGCACTTCAATTTGGTGCAAGTTATGCATTTTTAAGTGTTTTTATGGCAAGTTAAAGTCCACTTGGTCAAGGTCAAAGTAAACTCCATCAAGACAAGTCAAAGTCAACTCATTCAATTCAAAAACTAAGTCAAACACTCACATCCCTCATTATGGACGGGATTGCAATTATTTTGGTTGGATTTCCATGTTCTTAACCTTTTCATTTCTCGTAAGTTATGTCTTTTCATTTACAAGTCTTTTCATTTCTTGTAAGTTACAAGTCTTTTCATTTGCTTAAGACTTTTCATATGGCTTGCTAGGATGGCTATATATAGCCTTGAGATGTCTTGTTGTAACACAATTTGAAGTTGAATGAAAAGTGAGTTTTCTCATTAGCTTGGTTGAGAGATTTATCTCCCATTTCTTGTGCAATTTCTTTTGTCTTTAGAATTTGCATGTTAGGATCATTCAAGCGGTGTTGATCATACCTCTTGTGGAGTGATTCGAATCACGAGTTTAGAAACAAGTTTTCTCTACTCTTGATATTGATCATCAAGGTAATCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGGTTCTTAGATCCAACTCTCAAGGGTTTCTTAACATTTTGGTATCAGAGCATTAGGCTCTTTGATCGGATATATGTTTCCTTGCATTTATCTCTTTGAATTCTGTGTTCCTTGCTTATGTTTTATTATATCTAAGCATATGCATTCTGTCAAAAAATTACAAAAAAAAAAAAAGTATCAATTCCATTCATCTTTTCCAATTTTCGTCTGCTGCATTATTATAGATCTGGATCTTATCTACAAATCTATCTTCTTTGAAGTCTTCTGATTCGACTTTCTTAGTGGTGAAATTCGTGCACTTTGCTGATTGATTTATAAAAAAAAAAACTGAATGTGAAAGCATTTATTGTTAGCATTATTGTGCTTTTGCTGATCCATAACTGAAAAAAAAAAGAAAGAAAGAAGAAAAAAGCATAGAAGACCCCATTTGTCATTACTTCTTTGTGTAGCCTTGCATTGAAATCTCATGCTACTTCCTTGTTGCTTAATTCCCAACCATCTTTATCTTTAACTCTACTTTCGTTTCTTTCTAGCTTCCATTATAATTCTGTCCATTATTTTTTTTTCTTAACTTGTTTCTTTGTTGTTATTCGGGTTACTCCCAAAATCACACTCTTGTTTGAGTTCTTATGTGCTGTCTAAACCACTTGAAATGCACATAGCTTTTAACTTTGCTAGACTCACTTGCCGATTTGTTTGAAGTGCATAAGAGTGTACTAAGTTGTGAGGGAGAGATTGTAAGGGAGCGATACATTATTTTGAGTGTTGAGGGTTAAACACGAGTGAACTTCACTAACGAGTGAATTAGTGAGGGAGTGCTTGTGAGGTCCATTTCTTGTCACTTTATTTTGTTTTTACAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTTGTAGCATGAAAGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAACGGAGAGTTCCACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGATCCGATCATTGGGAGGACGATCAGGCTACAGTTTTAGCAGCTCCAAGAGGGGGTGATAGACACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAATTTCCAAAGAGCCCCACGAGCGAATGCTCAAGTTGATCGAAACTTGGGAAACATCAAATTAAAACTTCCGAAGTTCTATGGTAAGACTGATCCGGAAGCGTACATTCAATGGGAGAAAGAAGTGGAGTTCGTGTTTGATTGCCATAATTTCAGTGAAGAAAAGAAGGTACGACTATGTCTTGCTCAATTCAAAGATTATGCAGTAACATGGTGGGACAAATTAATGCCAATTAGGAGACGAAACCTTGAGGCGCCAATCAATTCATGGTATGAGTTCAAGGAGTTGTTGAGGAGGCGATTTGTTCCTAGACATTTCCACAGGGACACAGCGCAAAAGCTTCAAGTGTTGAGACAAGGTAGTAAGTCTGTGGAGGACTATTACAAGGAGATGGATACGTTGATGAATCGGCTGGATCTTGAAGAGGACATGGAGAATCTCATGGCACAGTTTCTTAATGGCTTAAACAAGGAGATTGCGGATAAGGTTGATCTACAACCTTACTTTAACATCGAAGAGATGTTGCACCTTGCCATCAAAATTGAGAAGCAGCTCCAAAGGCGATCTCAAAGGTATTCTACTAAGCCCTTTTCCCATTCATCTTCTACATGGAAAACGGATAGTAAGAGTGCTGATTCTAAACTTAGAAATCGAGAGGCATATGAGAAACCAAAAGAAAAGTTTGAGAAAGGAGAGAGTTCCAAGAAGGGGAAAGAGAAAGTTGATGAACCTAATGTGAGAAATCGGGATATTAAATGCTGGAAATGTCAAGGAGTAGGACATTACAGTCGAGACTGCCCTAATAGAAGAACTATGATAATTAGAGAAGGAGAGTTTGTAACAGAAGATGAGAAGGAAGATGAGGTAGAAGAGGACGACAATGGTGAATGTGAGAGTGAGGAGTATAGTGAAGAGGACCCTACACATATGTCCTTAGTCACTAGGAGAGCTCTCAATACTCAAATTAAGGAGGATGGCCTAGACCAACGAGAGAACTTATTTCACACTAGGTGTCTTGTCCAAACTGTGTCTTGTAGTGTGATTATTGATAGTGGTAGTTGTACCAACGTTGTAAGTTCTATTCTGGTCAAGAGGCTTAACTTAGAGACAAAACCACATCCTAGACCATATAAACTTCAATGGTTGAGTGATTGTGGGGAGGTAAAGGTGAGTAGACAAGCTCTTGTTTCTTTTGCTATTGGAAAATATGTTGATGATGTTTTGTGTGATGTTGTACCTATGCATGCCGGAGATATATTGTTGGGTAGACCTTGGCAATTTGACCGTCGGGTAATGTATGATGGGTATGCCAATCGCTATTCTTTTACTCATCATGGAAGAAAAACTACTCTTGTACCTTTGTCACCAAAATATGTGCATGTTGATCAATGCAAACTTGAAAAGAAGAGGCAAGAGGTTGATGCAAAAGCAAAAAGTGAAAAAGAAACAAAAGAAAATGAGTTGAGAGAAAAAAAGAGTTTGAGTGAAAAGCAAGGGAGTAGCAATCAGCCTAGTGGGAAAAATGAGAGAAAAGCCAAAACGGTGAGCTTGTATGCTAGTTCAAGTGAGGTTAGGAATGTTTTAATGGTGAAACGGACTGTTCTTGTACTTTTGTACAAAGGGTCTTGTTTTCTTACTAACGAGCTTAACACCTCCTTGCCTAGTATTTTTGTTTCTCTTTTACAGGAATTTGAGGACTTGTTTCCCGAGGAGATGCCCAAGGAATTGCCACCACTTTGTGGCATCGAGCATAAGATTGACTTCATTCCAGGTGCTACCATACCTAACCGACCAGCTTATAGGACTAATCCTACTGAAGCCAAAGAAATTTAAAGGCAAGTGGATGAATTGTTAGCTCATGGGTATGTACGCGAAAGCCTTAGTCCTTGTAGTGTGCCTGTTATTTTAGTGCCTAAAAAAGATGGAACTTGGAGAATGTGTGTAGACTGTAGGGCCATTAATAAGATCACTGTTAAATATCGTCATCCTATTCCTAGGTTAGATGATATGTTAGATGAATTGCATGGCTGTAGTCTCTTTACTAAGATTGATTTGAAATCTGGGTATCATCAAATTCGTATGAATGTTGGAGATGAATGGAAAACTGCATTTAAGACCAAATATGGATTGTATGAGTGGCTTGTTATGCCTTTTGGTTTAACTAATGCTCCTAGTACTTTCATGAGGTTGATGAACCATGTATTGCGTGAATATTTGGGAAAATTTGTGGTTGTTTATTTTGATGATATACTTGTGTATTCGAAGTCTTTGGAAGATCATGTAATGCATGTGCGTGCTGTTTTGACTACACTTAGAAACGAGAAATTGTATGCTAACCTAAAGAAATGTAATTTTTGCATGGAAAGGGTTAATTTTCTTGGTTTCATTGTGTCTAGTCGAGGAGTTGAGGTGGATAGTGAGAAAGTTAAGGCTATTAACGAATGGCCAACTCCCACGAATGTTGGGGAGGTTCGAAGTTTTCATGGGCTAGCTAGCTTTTATCGGCGTTTTATTAAGGACTTTAGCACCTAGCTTCACCCCTAAATGAATTGGTAAAGAAAAATGTTCCTTTTGTTTGGGGTACATCCCAAGAGCATGCTTTTAATGTTTTAAAGGATAAGTTGTGCAATGCTCCTCTACTTGCTTTACCGAACTTTGATTTGACTTTTGAAATTGAATATGATGCAAGTGGGGTTGGAATTGGGGCTGTACTAATGCAAAACCATAAGCCACTAATGTTCTTTAGTGAAAAGTTGAGTGATGCTTCTTTGGGTACCCAACTTATGACAAAGAACTTTATGCTTTGGTACGAGCTTTGCAAACTTGGCAGCATTATCTTTGGCCAAAGGAGTTCGTCATTCATACGGATCATGAGAGCTTAAAGCACTTGAGAGGGCAAAGCAAACTGAATCGCAGACATGCCAAGTGGTTGGAGTTTATAGAGACATTTCCATATGTGATTAAGTATAAACAAGGTAAGGAGAACATTGTTGCAGATGCTTTATCACGAAGGTATGCTCTCTTTAATACTTTGAATGCTAAGATTTTAGGATTTGAACATCTCAAGTCCTTGTATCTAGATGATGTGTTCTTTGCTCCTTTTGTTGAATCGTGTGAAAAAGGACTTGTTGTTGATGATTACATGTTGTTTGAAGGATTTTTGTTTCGAAAAGGAAAACTTTGCATTCCATCTTGTTCAATTCGTGAATTGCTTGTAAAGGAAGCTCATGGGGGTGGTTTAATGGCTCATTTTGGTGTTTCTAAAACTTATGATATGCTTGCTGAACATTTTTATTGGCCTAAGATGAAGCATGATGTGCATAAAGTGTGTAAGCATTGTATTGCATGCAAACAAGCTAAGTCTAGGTTACAACCACATGGTTTATATTCACCTTTGCCTGTTCTTACTACTCCTTGGGTTGATATTTCTATGGATTTTGTCCTTGGTTTACCAAGAACTCGGAAGGGTAGGGATAGTATATTTGTAGTGGTTGATAGGTTTAGCAAGATGACGCATTTCATACCATGCCATAAAACTGATGATGCTAAATTGATTGCTGATTTGTTTTTTAGGGAAGTTGTTCGTTTGCATGGCATTCCTAGAACTATTGTTAGTGATCGCGATGTAAAATTTTTAAGTCATTTTTGGCGTGTGTTATGGGGAAAGTTGGGAACCAAACTTGTTTATTCTACTACTTGTCATCCCCAAACTGATGGACAAACTGAGGTAGTAAATAGGACAATGGTTACCATGCTTCGAGCAATCATAGATAAAAATCTTAAAACTTGGGAGGATTGTTTGCCATTAATTGAATTTGCATATAATAGGGCTGTCCATAGTACTACTAAATGCACACCGTTTGAAATTGTATATGGTTTCAATCCTATCTCCCCACTTGATTTGTTGCCTATGCCTCCTAATGAATTTGTGAGTTATGATGCTAGCACAAAGGTTGATCTTGTCCATATGCTACATAAAGAAGTTAAGGAAAGGATTGAGAAGCAAAACACTAAGGTTTCTTCCCGCATCAATAAAGGACGCAAGCTCCTTGTTTTCCAGCCAGGGGATTGGGTTTGGGTACATTTTCGAAAGGAACGGTTTCCAACTCAACGAAGGTCTAAGTTGCTACCACGAGGCGATGGTCCTTTTCAAGTCCTTGAACGGATCAATGATAATGCTTATAAGATTAATTTGCCAGGTAAGTATGGAGTGAGTGCTACCTTTAATGTTTCTGATTTGTCTCCTTTTGATGTAGTTAATGACTTCGATTCGAGGACGAATCCTTCTGAAGATGGGGAGGATGATATGAACCAAGGAGCTACCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACTTCAACAAGCTTTGCTACTTCATGTCCAAGCGTTCTTGAACTCGACAAGAGAAATAAAGGGAGATGTGCAAGAAGTTAGAACTATGCACTTCAATTTGGTGCAAGTTATGCATTTTTAAGTGTTTTTATGGCAAGTTAAAGTCCACTTGGTCAAGGTCAAAGTCAACTCCATCAAGACAAGTCAAAGTCAACTCATTCAATTCAAAAACCAAGTCAAACACTCACATCCCTCATTATGGACGGGATTGCAATTATTTTGGTTGGATTTCCATGTTCTTAACCTTTTCATTTGCTTGTCTTTTCATTTCTCGTAAGTTATGTCTTTTCATTTACAAGTCTTTTCATTTCTTGTAAGTTACAAGTCTTTTCATTTGCTTAAGATTTTTCATATGGCTTGCTAGGATGGCTATATATAGCCTTGAGATGTCTTGTTGTAACACAATTTGAAGTTGAATGAAAAATGAGTTTTCTCATTAGCTTGGTTGAGAGATTTATCTCCCATTTCTTGTGTAATTTCTTTTGTCTTTAGAATTTGCATGTTAGGATCATTCAAGCGGTGTTGATCATACCTCTTGTGGAGTGATTCGAATCACGAGTTTAGAAACAAGTTTTCTCTACTCTTGA

mRNA sequence

ATGGAAACTGATATGAACCAAGGAGCTACCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACTTCAACCAGCTTTGCTACTTCATGTCCAAGCGTTCTTGAACTCGACAAGAGAAATAAAGGGAGATGTGCAAGAAGTAATCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTTGTAGCATGAAAGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAACGGAGAGTTCCACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGATCCGATCATTGGGAGGACGATCAGGCTACAGTTTTAGCAGCTCCAAGAGGGGGTGATAGACACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAATTTCCAAAGAGCCCCACGAGCGAATGCTCAAGATCATTCAAGCGGTGTTGATCATACCTCTTGTGGAGTGATTCGAATCACGAGTTTAGAAACAAGTTTTCTCTACTCTTGA

Coding sequence (CDS)

ATGGAAACTGATATGAACCAAGGAGCTACCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACTTCAACCAGCTTTGCTACTTCATGTCCAAGCGTTCTTGAACTCGACAAGAGAAATAAAGGGAGATGTGCAAGAAGTAATCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTTGTAGCATGAAAGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAACGGAGAGTTCCACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGATCCGATCATTGGGAGGACGATCAGGCTACAGTTTTAGCAGCTCCAAGAGGGGGTGATAGACACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAATTTCCAAAGAGCCCCACGAGCGAATGCTCAAGATCATTCAAGCGGTGTTGATCATACCTCTTGTGGAGTGATTCGAATCACGAGTTTAGAAACAAGTTTTCTCTACTCTTGA

Protein sequence

METDMNQGATVVMPHGPITRSRARKLQPALLLHVQAFLNSTREIKGDVQEVIRSKTFPWVDSILVFGVFGIEFYGSCSLASMANLGDEGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVMDEDEYEGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQDHSSGVDHTSCGVIRITSLETSFLYS
Homology
[Close]
BLAST of Moc06g29970 vs. NCBI nr
Match: XP_022157414.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia])

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-47
Identity = 104/116 (89.66%), Postives = 106/116 (91.38%), Query Frame = 0 

Query: 82  MANLGDEGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVMD 141
           MANLG EGNISDARRREALEGTVERMI SM+ALTERIGRLETQNQA+ RVPPPP  RVMD
Sbjct: 1   MANLGXEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAEGRVPPPPXXRVMD 60

Query: 142 EDEYE--GSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQ 196
           EDEYE  GSDHWEDDQATVLA PRGGD HVG GLDRGRGRGRGYHNFQRAPRANAQ
Sbjct: 61  EDEYEGDGSDHWEDDQATVLAXPRGGDXHVGXGLDRGRGRGRGYHNFQRAPRANAQ 116

[Close]
BLAST of Moc06g29970 vs. NCBI nr
Match: KAA0043652.1 (uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-12
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0 

Query: 88  EGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVM-----DE 147
           E    + + REA +G + RMI +M+ALT+R+ R E +N+A+ R+PPP  P ++     ++
Sbjct: 2   ENQNDEVQLREAQQGVIARMISNMEALTDRLERFEIENRARERMPPPLAPPMLINHNDNQ 61

Query: 148 DEYEGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANA 195
           DE +GSD  +DDQ T+L  P    R VG G+ R RGRGR Y N QR  +  A
Sbjct: 62  DEGDGSDDLDDDQVTLLGEP----RRVGHGVVRRRGRGRAYQNIQRRAQQEA 109

[Close]
BLAST of Moc06g29970 vs. NCBI nr
Match: XP_023520282.1 (uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-11
Identity = 57/122 (46.72%), Postives = 70/122 (57.38%), Query Frame = 0 

Query: 82  MANLGDEGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVMD 141
           M N  D  NI+DAR REA + T+ER+I  ++ LT+RIGRLE QNQA++R+P P P     
Sbjct: 1   MENPDDNTNITDARLREAQQRTMERLIRGIEELTDRIGRLEIQNQARQRIPQPTP----S 60

Query: 142 EDEYEG--SDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNF-QRAPRANAQDHS 201
            D YEG  SDH ED+              VG GL RGR  GR YHN  QR P  +  D +
Sbjct: 61  TDTYEGDNSDHHEDN-----------PHAVGHGLMRGRDHGRRYHNLQQRVPYDDRIDRN 107

[Close]
BLAST of Moc06g29970 vs. NCBI nr
Match: XP_023520835.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-11
Identity = 57/122 (46.72%), Postives = 70/122 (57.38%), Query Frame = 0 

Query: 82  MANLGDEGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVMD 141
           M N  D  NI+DAR REA + T+ER+I  ++ LT+RIGRLE QNQA++R+P P P     
Sbjct: 1   MENPDDNTNITDARLREAQQRTMERLIRGIEELTDRIGRLEIQNQARQRIPQPTP----S 60

Query: 142 EDEYEG--SDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNF-QRAPRANAQDHS 201
            D YEG  SDH ED+              VG GL RGR  GR YHN  QR P  +  D +
Sbjct: 61  TDTYEGDNSDHHEDN-----------PHAVGHGLMRGRDHGRRYHNLQQRVPYDDRIDRN 107

[Close]
BLAST of Moc06g29970 vs. NCBI nr
Match: XP_023553652.1 (uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 76.6 bits (187), Expect = 2.9e-10
Identity = 55/122 (45.08%), Postives = 70/122 (57.38%), Query Frame = 0 

Query: 82  MANLGDEGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVMD 141
           M N  D  +I+DAR REA + T++R+I  ++ LT+RIGRLE QNQA++R+P P P     
Sbjct: 1   MENPDDNTDITDARLREAQQRTMKRLIRGIEELTDRIGRLEIQNQARQRIPLPAP----S 60

Query: 142 EDEYEG--SDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNF-QRAPRANAQDHS 201
            D YEG  SDH ED+              VG GL RGR  GR YHN  QR P  +  D +
Sbjct: 61  TDTYEGDNSDHHEDN-----------PHAVGHGLMRGRDHGRRYHNLQQRVPYDDRIDRN 107

[Close]
BLAST of Moc06g29970 vs. ExPASy TrEMBL
Match: A0A6J1DWE9 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 OS=Momordica charantia OX=3673 GN=LOC111024115 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 8.5e-48
Identity = 104/116 (89.66%), Postives = 106/116 (91.38%), Query Frame = 0 

Query: 82  MANLGDEGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVMD 141
           MANLG EGNISDARRREALEGTVERMI SM+ALTERIGRLETQNQA+ RVPPPP  RVMD
Sbjct: 1   MANLGXEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAEGRVPPPPXXRVMD 60

Query: 142 EDEYE--GSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQ 196
           EDEYE  GSDHWEDDQATVLA PRGGD HVG GLDRGRGRGRGYHNFQRAPRANAQ
Sbjct: 61  EDEYEGDGSDHWEDDQATVLAXPRGGDXHVGXGLDRGRGRGRGYHNFQRAPRANAQ 116

[Close]
BLAST of Moc06g29970 vs. ExPASy TrEMBL
Match: A0A5A7TK52 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G001000 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0 

Query: 88  EGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVM-----DE 147
           E    + + REA +G + RMI +M+ALT+R+ R E +N+A+ R+PPP  P ++     ++
Sbjct: 2   ENQNDEVQLREAQQGVIARMISNMEALTDRLERFEIENRARERMPPPLAPPMLINHNDNQ 61

Query: 148 DEYEGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANA 195
           DE +GSD  +DDQ T+L  P    R VG G+ R RGRGR Y N QR  +  A
Sbjct: 62  DEGDGSDDLDDDQVTLLGEP----RRVGHGVVRRRGRGRAYQNIQRRAQQEA 109

[Close]
BLAST of Moc06g29970 vs. ExPASy TrEMBL
Match: A0A5D3CHG3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001250 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.7e-09
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 107 MICSMKALTERIGRLETQNQAQRRVPPPPPPRVM-----DEDEYEGSDHWEDDQATVLAA 166
           MI +M+ALT+R+ R E +N+A+ R+PPP  P ++     ++DE +GSD  +DDQ T+L  
Sbjct: 1   MISNMEALTDRLERFEIENRARERMPPPLAPPMLINHNDNQDEGDGSDDLDDDQVTLLGE 60

Query: 167 PRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANA 195
           P    R VG G+ R RGRGR Y N QR  +  A
Sbjct: 61  P----RRVGHGVVRRRGRGRAYQNIQRRAQQEA 89

[Close]
BLAST of Moc06g29970 vs. ExPASy TrEMBL
Match: A0A6J1I7T3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111469948 OS=Cucurbita maxima OX=3661 GN=LOC111469948 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 0 

Query: 82  MANLGDEGNISDARRREALEGTVERMICSMKALTERIGRLETQNQAQRRVPPPPPPRVMD 141
           M N  +  +I+DAR REA + T+ER+I  ++ LT+RIGRLE QNQA++R+P P P     
Sbjct: 1   MENPDNNTDITDARLREAQQRTMERLIRGIEELTDRIGRLEIQNQARQRIPLPTP----S 60

Query: 142 EDEYEG--SDHWEDD 155
            D YEG  SDH ED+
Sbjct: 61  TDTYEGDNSDHHEDN 71

The following BLAST results are available for this feature:
BLAST of Moc06g29970 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157414.11.7e-4789.66LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia][more]
KAA0043652.13.1e-1242.86uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa][more]
XP_023520282.11.5e-1146.72uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo][more]
XP_023520835.11.5e-1146.72LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp.... [more]
XP_023553652.12.9e-1045.08uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo][more]
BLAST of Moc06g29970 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g29970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DWE98.5e-4889.66LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 OS=Momordica charantia... [more]
A0A5A7TK521.5e-1242.86Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3CHG32.7e-0945.16Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1I7T31.6e-0650.67LOW QUALITY PROTEIN: uncharacterized protein LOC111469948 OS=Cucurbita maxima OX... [more]
BLAST of Moc06g29970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g29970.1Moc06g29970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding