Moc06g29680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g29680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr6: 22369719 .. 22370273 (-)
RNA-Seq Expression	Moc06g29680
Synteny	Moc06g29680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCCAAGCATATGAAGAAATGGGCCGACCGCAAGAGACGCCCTCTCGAATTTCGAGTAGGTGACAAAGTTCTTATTAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTAGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCAGCTTGGATGAAGATTCACCCGGTGATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATACTGTTGTGCGGCCCGCCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTTCTCGTCAAATGGAAGAACCTACCTGATGCAGAGACCAGCTGGAAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCCAGCTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

mRNA sequence

ATGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCCAAGCATATGAAGAAATGGGCCGACCGCAAGAGACGCCCTCTCGAATTTCGAGTAGGTGACAAAGTTCTTATTAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTAGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCAGCTTGGATGAAGATTCACCCGGTGATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATACTGTTGTGCGGCCCGCCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTTCTCGTCAAATGGAAGAACCTACCTGATGCAGAGACCAGCTGGAAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCCAGCTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

Coding sequence (CDS)

ATGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCCAAGCATATGAAGAAATGGGCCGACCGCAAGAGACGCCCTCTCGAATTTCGAGTAGGTGACAAAGTTCTTATTAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTAGTGAGAAAGTACGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCGTATAAGGTGGTGTTACCAGCTTGGATGAAGATTCACCCGGTGATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATACTGTTGTGCGGCCCGCCATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTTCTCGTCAAATGGAAGAACCTACCTGATGCAGAGACCAGCTGGAAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCCAGCTGCAGCAGTTGACAGGGACGTCAACCGTTTAA

Protein sequence

MTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEAEEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTSTV

Homology

[Close]

BLAST of Moc06g29680 vs. NCBI nr
Match: KAA0032849.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 6.9e-74
Identity = 141/182 (77.47%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1406 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1465

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1466 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPIIDLSQKEDKDV 1525

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER RK  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1526 EEILAERVRKSRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1585

Query: 183  TV 185
            T+
Sbjct: 1586 TI 1587

[Close]

BLAST of Moc06g29680 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1402 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1461

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1462 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 1521

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1522 EEILAERVRRGRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1581

Query: 183  TV 185
            T+
Sbjct: 1582 TI 1583

[Close]

BLAST of Moc06g29680 vs. NCBI nr
Match: TYK19637.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK20902.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK28777.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3   EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
           +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 78  DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 137

Query: 63  EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
           EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 138 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 197

Query: 123 EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
           EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 198 EEILAERVRRGRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 257

Query: 183 TV 185
           T+
Sbjct: 258 TI 259

[Close]

BLAST of Moc06g29680 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1406 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1465

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1466 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 1525

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1526 EEILAERVRRGRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1585

Query: 183  TV 185
            T+
Sbjct: 1586 TI 1587

[Close]

BLAST of Moc06g29680 vs. NCBI nr
Match: TYK28713.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1406 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1465

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1466 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 1525

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1526 EEILAERVRRGRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1585

Query: 183  TV 185
            T+
Sbjct: 1586 TI 1587

[Close]

BLAST of Moc06g29680 vs. ExPASy TrEMBL
Match: A0A5A7SUK4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00100 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.4e-74
Identity = 141/182 (77.47%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1406 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1465

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1466 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPIIDLSQKEDKDV 1525

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER RK  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1526 EEILAERVRKSRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1585

Query: 183  TV 185
            T+
Sbjct: 1586 TI 1587

[Close]

BLAST of Moc06g29680 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.5e-74
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1406 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1465

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1466 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 1525

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1526 EEILAERVRRGRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1585

Query: 183  TV 185
            T+
Sbjct: 1586 TI 1587

[Close]

BLAST of Moc06g29680 vs. ExPASy TrEMBL
Match: A0A5D3DBE0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00240 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.5e-74
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3   EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
           +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 78  DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 137

Query: 63  EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
           EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 138 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 197

Query: 123 EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
           EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 198 EEILAERVRRGRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 257

Query: 183 TV 185
           T+
Sbjct: 258 TI 259

[Close]

BLAST of Moc06g29680 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.5e-74
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1406 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1465

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1466 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 1525

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1526 EEILAERVRRGRRPARRIHEYLVKWKNLPVEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1585

Query: 183  TV 185
            T+
Sbjct: 1586 TI 1587

[Close]

BLAST of Moc06g29680 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.5e-74
Identity = 140/182 (76.92%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 3    EIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPV 62
            +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ+RFRGRKDQRLVRKYEGPV
Sbjct: 1406 DIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKLRPEQVRFRGRKDQRLVRKYEGPV 1465

Query: 63   EVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNTVVRPAIDFKRKEDKEA 122
            EV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ 
Sbjct: 1466 EVLKKVGNTSYRVALPTWMKIYPVIHVSNLKPYHQDTEDLQRNVVTRPTIDLSQKEDKDV 1525

Query: 123  EEILAERTRKVGRPVRKVREFLVKWKNLPDAETSWKREEDLEAWKTKIEDFQLQQLTGTS 182
            EEILAER R+  RP R++ E+LVKWKNLP  ETSW+R EDLEAWK KIEDF+L+QLTGTS
Sbjct: 1526 EEILAERVRRGRRPARRIHEYLVKWKNLPMEETSWERVEDLEAWKQKIEDFKLRQLTGTS 1585

Query: 183  TV 185
            T+
Sbjct: 1586 TI 1587

The following BLAST results are available for this feature:

BLAST of Moc06g29680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032849.1	6.9e-74	77.47	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	1.5e-73	76.92	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK19637.1	1.5e-73	76.92	reverse transcriptase [Cucumis melo var. makuwa] >TYK20902.1 reverse transcripta...	[more]
KAA0037220.1	1.5e-73	76.92	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
TYK28713.1	1.5e-73	76.92	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Moc06g29680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g29680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SUK4	3.4e-74	77.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81...	[more]
A0A5D3C4R1	7.5e-74	76.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3DBE0	7.5e-74	76.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24...	[more]
A0A5A7UXR6	7.5e-74	76.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5A7T0E2	7.5e-74	76.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]

BLAST of Moc06g29680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 119..178 e-value: 1.3E-7 score: 41.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 120..184 score: 12.738501
None	No IPR available	GENE3D	2.40.50.40		coord: 115..181 e-value: 4.0E-11 score: 44.4
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 121..174 e-value: 1.8E-10 score: 40.5
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 81..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g29680.1	Moc06g29680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity