Moc06g29440 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATACGAGAATGCTAGTGATCTTTGGACAGCCATTCAAGAGCTATTTGGAGTTCAATCTCGAGCAAAGGAAGACTATCTTCGTCAGGTATTTCAACAAACTCATAAAAGTTCCCTCAAAATGGTTGATTATTTGCGTGTGATGAAGTCTCATGTCGTCAATTTGGGTCAAGCAGGTAGTCCTGCCTCTACTCATTCACTAATTTCTCAAGTTTTACTAGGATTAGATGAAGAGTACAAACCAGTTGTTGCTATGATTCAAGGAAGCACAGGAATTACATGGTTTGAAATGCAGGCAGAGTTACTTGTCTTTGAAAAAATATTGGAACTCCAGAACACCCAAAAAAGTGTCGTGTCATTTAATTTAGCCTCAGTGAATATCGCAAATAGCAAAAATAATGTTCATGGTGGACAACGACAGGCTTACTTTAACAACACCCAAGTTAACAATAGTCGGCAGACCCAACATTCTAATAATAATCAAAGGGGTGGTGGAGGCCGAAGTTGTGGCAAAGGTCGTTGGAACAACAACAATCGTCTCATTTGTTAGGTTTGTGGAAAGGTAAGGCACTCAGCATTAACTTGTCATCACTAGTTTGATAAACCGTTTTTAGGGTCTAATTCGAATCAAGGAAAGACTGGAAATCCCAATGGTTCATATGCACAAAAATGGGGGAAATAATCCAAGTCTAGCTCCTCATGCCTTTCTCACAACACAGAACATCAATCCTTTTGTGGCAAATTCTGAAACCGTCCTAGATCCAAATTGGTATGTTGACAATGGTGCCTCAAATCATGTGATAGCGGACTATCACAATATTATACATCCTTCGGAGTATGGAGGTACAGAAAAAGTGACGGTCGGTAATGGAAATAAATTGATGATTTCTCATGTTGGTAAATCTTATTTAGCCTCTGATCATGCTTTGCTTAATCTTGAGAATGTACTTTGTGTGCCTGACATTACTAAAAATCTTGCAAGTGTGTCAAAACTTGGTTGAGATAATAATGTGTGTTTGGAATTTCATGCTGATTTCTGTCTTGTAAAGGACATTCATTCGAGCAAGGTGATGCTGAAGGGTCTCTTAAAGATGAGCTTTACCAACTTGACACGGGAGGTGCAATTACTAATAGTGCTTCAAGTCACACTACGAGTTGCTTGGAGTCAGCTAATGATACAATTTCTCACTCTATTTGTGTTCTTTCTAATTTTGCTCCTAGTGTAAATGTTGTGGTGTCTAAAGTTACGTGGCATCGAAGACTTGGACACCCATCTTCCAAAGTTCTTGATTTATTAGTTAAAATTTGTCTTATACTGGTGAAAGTGAATGATATTTTCAAATTTTCTGAAGCATTTCAGTTTGGTAAATCTCATGCTCTTCCGCTTGCCAATTCAAATTCTCATGCTACTACCCCATGTGATTTGGTTCACACGGACCTATAA ATGGGATACGAGAATGCTAGTGATCTTTGGACAGCCATTCAAGAGCTATTTGGAGTTCAATCTCGAGCAAAGGAAGACTATCTTCGTCAGGTATTTCAACAAACTCATAAAAGTTCCCTCAAAATGGTTGATTATTTGCGTGTGATGAAGTCTCATGTCGTCAATTTGGGTCAAGCAGGTAGTCCTGCCTCTACTCATTCACTAATTTCTCAAGTTTTACTAGGATTAGATGAAGAGTACAAACCAGTTGTTGCTATGATTCAAGGAAGCACAGGAATTACATGGCTTACTTTAACAACACCCAAGTTAACAATAGTCGGCAGACCCAACATTCTAATAATAATCAAAGGGGTGGTGGAGGCCGAAGTTGTGGCAAAGGGTCTAATTCGAATCAAGGAAAGACTGGAAATCCCAATGGTTCATATGCACAAAAATGGGGGAAATAATCCAAGTCTAGCTCCTCATGCCTTTCTCACAACACAGAACATCAATCCTTTTGTGGCAAATTCTGAAACCGTCCTAGATCCAAATTGGTATGTTGACAATGGTGCCTCAAATCATGTGATAGCGGACTATCACAATATTATACATCCTTCGGAGTATGGAGGACATTCATTCGAGCAAGGTGATGCTGAAGGGTCTCTTAAAGATGAGCTTTACCAACTTGACACGGGAGGTGCAATTACTAATAGTGCTTCAAGTCACACTACGAGTTGCTTGGAGTCAGCTAATGATACAATTTCTCACTCTATTTGTGTTCTTTCTAATTTTGCTCCTAGTGTAAATGTTGTGGTGTCTAAAGTTACGTGGCATCGAAGACTTGGACACCCATCTTCCAAAGTTCTTGATTTATTAGTTAAAATTTGTCTTATACTGGTGAAAGTGAATGATATTTTCAAATTTTCTGAAGCATTTCAGTTTGGTAAATCTCATGCTCTTCCGCTTGCCAATTCAAATTCTCATGCTACTACCCCATGTGATTTGGTTCACACGGACCTATAA ATGGGATACGAGAATGCTAGTGATCTTTGGACAGCCATTCAAGAGCTATTTGGAGTTCAATCTCGAGCAAAGGAAGACTATCTTCGTCAGGTATTTCAACAAACTCATAAAAGTTCCCTCAAAATGGTTGATTATTTGCGTGTGATGAAGTCTCATGTCGTCAATTTGGGTCAAGCAGGTAGTCCTGCCTCTACTCATTCACTAATTTCTCAAGTTTTACTAGGATTAGATGAAGAGTACAAACCAGTTGTTGCTATGATTCAAGGAAGCACAGGAATTACATGGCTTACTTTAACAACACCCAAGTTAACAATAGTCGGCAGACCCAACATTCTAATAATAATCAAAGGGGTGGTGGAGGCCGAAGTTGTGGCAAAGGGTCTAATTCGAATCAAGGAAAGACTGGAAATCCCAATGGTTCATATGCACAAAAATGGGGGAAATAATCCAAGTCTAGCTCCTCATGCCTTTCTCACAACACAGAACATCAATCCTTTTGTGGCAAATTCTGAAACCGTCCTAGATCCAAATTGGTATGTTGACAATGGTGCCTCAAATCATGTGATAGCGGACTATCACAATATTATACATCCTTCGGAGTATGGAGGACATTCATTCGAGCAAGGTGATGCTGAAGGGTCTCTTAAAGATGAGCTTTACCAACTTGACACGGGAGGTGCAATTACTAATAGTGCTTCAAGTCACACTACGAGTTGCTTGGAGTCAGCTAATGATACAATTTCTCACTCTATTTGTGTTCTTTCTAATTTTGCTCCTAGTGTAAATGTTGTGGTGTCTAAAGTTACGTGGCATCGAAGACTTGGACACCCATCTTCCAAAGTTCTTGATTTATTAGTTAAAATTTGTCTTATACTGGTGAAAGTGAATGATATTTTCAAATTTTCTGAAGCATTTCAGTTTGGTAAATCTCATGCTCTTCCGCTTGCCAATTCAAATTCTCATGCTACTACCCCATGTGATTTGGTTCACACGGACCTATAA MGYENASDLWTAIQELFGVQSRAKEDYLRQVFQQTHKSSLKMVDYLRVMKSHVVNLGQAGSPASTHSLISQVLLGLDEEYKPVVAMIQGSTGITWLTLTTPKLTIVGRPNILIIIKGVVEAEVVAKGLIRIKERLEIPMVHMHKNGGNNPSLAPHAFLTTQNINPFVANSETVLDPNWYVDNGASNHVIADYHNIIHPSEYGGHSFEQGDAEGSLKDELYQLDTGGAITNSASSHTTSCLESANDTISHSICVLSNFAPSVNVVVSKVTWHRRLGHPSSKVLDLLVKICLILVKVNDIFKFSEAFQFGKSHALPLANSNSHATTPCDLVHTDL Homology
BLAST of Moc06g29440 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia]) HSP 1 Score: 166.0 bits (419), Expect = 5.5e-37 Identity = 122/371 (32.88%), Postives = 165/371 (44.47%), Query Frame = 0
BLAST of Moc06g29440 vs. NCBI nr
Match: XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia]) HSP 1 Score: 155.6 bits (392), Expect = 7.4e-34 Identity = 77/95 (81.05%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Moc06g29440 vs. NCBI nr
Match: KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]) HSP 1 Score: 155.6 bits (392), Expect = 7.4e-34 Identity = 102/287 (35.54%), Postives = 141/287 (49.13%), Query Frame = 0
BLAST of Moc06g29440 vs. NCBI nr
Match: KAA0057475.1 (uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa] >TYK30171.1 uncharacterized protein E5676_scaffold216G001590 [Cucumis melo var. makuwa]) HSP 1 Score: 153.3 bits (386), Expect = 3.7e-33 Identity = 91/209 (43.54%), Postives = 127/209 (60.77%), Query Frame = 0
BLAST of Moc06g29440 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 140.2 bits (352), Expect = 3.2e-29 Identity = 96/269 (35.69%), Postives = 133/269 (49.44%), Query Frame = 0
BLAST of Moc06g29440 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 2.7e-37 Identity = 122/371 (32.88%), Postives = 165/371 (44.47%), Query Frame = 0
BLAST of Moc06g29440 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.6e-34 Identity = 102/287 (35.54%), Postives = 141/287 (49.13%), Query Frame = 0
BLAST of Moc06g29440 vs. ExPASy TrEMBL
Match: A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.6e-34 Identity = 77/95 (81.05%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Moc06g29440 vs. ExPASy TrEMBL
Match: A0A5D3E3L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001590 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.8e-33 Identity = 91/209 (43.54%), Postives = 127/209 (60.77%), Query Frame = 0
BLAST of Moc06g29440 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.6e-29 Identity = 96/269 (35.69%), Postives = 133/269 (49.44%), Query Frame = 0
BLAST of Moc06g29440 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|