Moc06g19610 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g19610
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr6: 15427995 .. 15430419 (+)
RNA-Seq ExpressionMoc06g19610
SyntenyMoc06g19610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGACTGGGTCACCCAGGTATAGAAGCTATGTATGGATCGACAGTGTATGGATCACTGGCTAAAGCTGGCTTAGATGGGCTGCTACTTCTAGCAGCTTGCTTCAAAAAGCTTGACTTGACCTTATTATTATTCAAAGGGGGCAAAATTACAGTAAAGAAAAAGTCTCATGTAGGATAGCTGCCGCTAACAAAATTCACACAATTTTTGTATAGAAACAACAGCAGCAATACGGCTTGTGAAAAGCAAGCGCAAGTGATAGAAAGTCTCGTCCCTCGTGCGTTCGCGCGAACGACTATAAAATGGTGATTTCATTCGATAATTATTGAAAGAAGGACCAACGACGATCCTATCCTAAAGGAGAAGGAGGAGTAGGAGAATTCGTATTCTTTGAAGATCGAGGGTGTGTTACTGGGTCGGTGGGGGAACCCATAGGAAGGGTGGACAACCCGTCGAATTCACATCAGAGATCACCAACATAAACACAAACGAAATCGTCGAATTGCGTATAAAAACAATGAAACCTGTACAGTAGTTGCCGATCGACTTGGTATTCTCGACGAAGCCTATATATATACCTGCAGAACTAACGACTTTATTAGAAATTCGAATTACCAACTTTTACACGAATTTTAAAGTGGATGAGATTGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACATGTTTATGGATTGAAGGCGATTCAAGCTTGGGAAATGGTGGAATTTGCTTGCGGTGAAAGCAGCGAAAAAAGTAGAGCTGTGAAATCGGTGTGGTGAGGTATTGGAAGTGTTTAGCGAATCAAGAGAAAGACAAAATAGAAGAGCACTGTGCTATACTGGCAGAGCTTCCGAAGGACAGGATCACAGTGGCTCTTAGATGCCATGTGTTGGGCCTTCTCACTTGTGGTGTGGTCCAACCCATGGACGGAGTCGCCTTCATCCCCCCCCCCCATTGCTCAGTGCTCCCTACTATTTCTCATGGCTTTACCCGTTCCCGGCGTGGACGCATGCTTCTATAAGAGAATGAGAAGCTTGGCCCCTCTTCATTCTCTACAGGGTTCCAAACCTTTCTTCAACATAGGTGACAACGAGCGAGGCAGAGATGGAAGAGATCTAACAAGGGAATAAGAAGCAAGCTCGCCTTTTTTGATTTTGATAGAGGGGGATGGAGAAAGTGGACAAAACAGACTCGCATTTCCCAGTCGAAAAGATGAGTTCCTTTTTTGTCTCGCATTTCTCATCAAAGCTAACGCGTGAAACACTCCGCCTGGGTAGTACGATCGCAAGACCAAAACTCAAAGGAATTGACAGGGGCCTGCACAAGCGGTGAAGCATAGCGCTGCCGGAGGTCCCCGATCAACAATAGGTGGCAGCTCAAGAGGCGCTGCCCCCTTCAAGTTCGGTTCTTCTTAGTTGGAACCTCTTTTTCTTTTTGAACAACCCAAGCTAGATGACAAAGCTGAGCTCGAAGGTACCTTTTTGATGAGAAAGAGGAAAAGAGTCAGTATTGAAAGACAAATCAATTAGATATCTCTTTTAACTAATTCCCTGATTGCGAGATCGTGGGATCAAGTGGACATTCAAAGTTTCCATGGCCGATTGCATCCTAAGGACTTTCTTGATTGAAAATGTAGCATGGAAAAGTTCTTTGATTGGAAAGAACGAGACGAGGTTTGCGAAGATGAAATTCCTGAGCACCTTAGTAAGCTATTTCACATGAATGATCTTGGTCCTCTAACCGAGATTGAAGTTTTTGTCCCAGCATACCCCTAGTTACTATATGCTGAGTGAAAGTGAAGTGGTGGGCCTACCCGTTCCAACCAGAGGTATGCAGGGATTTATGAAGAGCAGCACCTTATAATGTTCATGACCAATTGGATCTTGACGTACCAGTAGGTACCAGAGGAGATCGTTATGATCGTTACTGTATCCATATCGAAGAGATGTGACAAAGTGTTCGGATCATTGTGCAATGTCTTTTTTGCTCGTTACTGTCTCATCCCAATGTTCAGACGGACGAATGCTGCTGGGAGAGTGCAGAATCATCTACAGGCGCCTGATAAAACCATTATCTTCACTGCGAGTCATCAATCATTCCACAAATGCTCAGTCCTTGGTTAAAAAGTGAACAGTTTCAAGCACCTTTTCTAGACCTACCACAAAGTGTAATTCTATCTTACCATGAAATATTTAGGGATTTTAACATCTACAGTAATCCTGAAGGTATCCGATAAGATAAGATCTCTCGAACGAAGTGAAGTGATAGCAAGAGAAGACAACTGGCGGGAGATCTCTATTCATTACGCCCCTTTGTATAGGTTGGGGAAAATGGAAGTGGCTTTTTGGGAAGCCCATTCCAACCGCGCTCACGGTCCGGCTGGCCTGCCAGCGATAGTGGGAATTCTCCCGTTCCCTGGTTAA

mRNA sequence

ATGCGACTGGGTCACCCAGGTATAGAAGCTATGTATGGATCGACAGTGTATGGATCACTGGCTAAAGCTGGCTTAGATGGGCTGCTACTTCTAGCAGCTTGCTTCAAAAAGCTTGACTTGACCTTATTATTATTCAAAGGGGGCAAAATTACAGTAAAGAAAAAGTCTCATGCGATTCAAGCTTGGGAAATGGTGGAATTTGCTTGCGGTGAAAGCAGCGAAAAAAGTAGAGCTGTGAAATCGGTGTGGACAGGATCACAGTGGCTCTTAGATGCCATGTGTTGGGCCTTCTCACTTGTGGTGTGGTCCAACCCATGGACGGAGTCGCCTTCATCCCCCCCCCCCATTGCTCAGTGCTCCCTACTATTTCTCATGGCTTTACCCGTTCCCGGCGTGGACGCATGCTTCTATAAGAGAATGAGAAGCTTGGCCCCTCTTCATTCTCTACAGGGTTCCAAACCTTTCTTCAACATAGCATGGAAAAGTTCTTTGATTGGAAAGAACGAGACGAGGTTTGCGAAGATGAAATTCCTGAGCACCTTAGTACCAGAGGAGATCGTTATGATCGTTACTGTATCCATATCGAAGAGATGTGACAAAGTGTTCGGATCATTGTGCAATGTCTTTTTTGCTCGTTACTGTCTCATCCCAATGTTCAGACGGACGAATGCTGCTGGGAGAGTGCAGAATCATCTACAGGCGCCTGATAAAACCATTATCTTCACTGCGAGGATTTTAACATCTACAGTAATCCTGAAGGTATCCGATAAGATAAGATCTCTCGAACGAAGTGAAGTGATAGCAAGAGAAGACAACTGGCGGGAGATCTCTATTCATTACGCCCCTTTGTATAGGTTGGGGAAAATGGAAGTGGCTTTTTGGGAAGCCCATTCCAACCGCGCTCACGGTCCGGCTGGCCTGCCAGCGATAGTGGGAATTCTCCCGTTCCCTGGTTAA

Coding sequence (CDS)

ATGCGACTGGGTCACCCAGGTATAGAAGCTATGTATGGATCGACAGTGTATGGATCACTGGCTAAAGCTGGCTTAGATGGGCTGCTACTTCTAGCAGCTTGCTTCAAAAAGCTTGACTTGACCTTATTATTATTCAAAGGGGGCAAAATTACAGTAAAGAAAAAGTCTCATGCGATTCAAGCTTGGGAAATGGTGGAATTTGCTTGCGGTGAAAGCAGCGAAAAAAGTAGAGCTGTGAAATCGGTGTGGACAGGATCACAGTGGCTCTTAGATGCCATGTGTTGGGCCTTCTCACTTGTGGTGTGGTCCAACCCATGGACGGAGTCGCCTTCATCCCCCCCCCCCATTGCTCAGTGCTCCCTACTATTTCTCATGGCTTTACCCGTTCCCGGCGTGGACGCATGCTTCTATAAGAGAATGAGAAGCTTGGCCCCTCTTCATTCTCTACAGGGTTCCAAACCTTTCTTCAACATAGCATGGAAAAGTTCTTTGATTGGAAAGAACGAGACGAGGTTTGCGAAGATGAAATTCCTGAGCACCTTAGTACCAGAGGAGATCGTTATGATCGTTACTGTATCCATATCGAAGAGATGTGACAAAGTGTTCGGATCATTGTGCAATGTCTTTTTTGCTCGTTACTGTCTCATCCCAATGTTCAGACGGACGAATGCTGCTGGGAGAGTGCAGAATCATCTACAGGCGCCTGATAAAACCATTATCTTCACTGCGAGGATTTTAACATCTACAGTAATCCTGAAGGTATCCGATAAGATAAGATCTCTCGAACGAAGTGAAGTGATAGCAAGAGAAGACAACTGGCGGGAGATCTCTATTCATTACGCCCCTTTGTATAGGTTGGGGAAAATGGAAGTGGCTTTTTGGGAAGCCCATTCCAACCGCGCTCACGGTCCGGCTGGCCTGCCAGCGATAGTGGGAATTCTCCCGTTCCCTGGTTAA

Protein sequence

MRLGHPGIEAMYGSTVYGSLAKAGLDGLLLLAACFKKLDLTLLLFKGGKITVKKKSHAIQAWEMVEFACGESSEKSRAVKSVWTGSQWLLDAMCWAFSLVVWSNPWTESPSSPPPIAQCSLLFLMALPVPGVDACFYKRMRSLAPLHSLQGSKPFFNIAWKSSLIGKNETRFAKMKFLSTLVPEEIVMIVTVSISKRCDKVFGSLCNVFFARYCLIPMFRRTNAAGRVQNHLQAPDKTIIFTARILTSTVILKVSDKIRSLERSEVIAREDNWREISIHYAPLYRLGKMEVAFWEAHSNRAHGPAGLPAIVGILPFPG
Homology
[Close]
BLAST of Moc06g19610 vs. NCBI nr
Match: KAG2270293.1 (hypothetical protein Bca52824_064848 [Brassica carinata])

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-04
Identity = 23/28 (82.14%), Postives = 27/28 (96.43%), Query Frame = 0 

Query: 291 VAFWEAHSNRAHGPAGLPAIVGILPFPG 319
           +AFWEA S+RAHGPAGLPA+VGI+PFPG
Sbjct: 193 LAFWEARSHRAHGPAGLPAVVGIIPFPG 220

[Close]
BLAST of Moc06g19610 vs. NCBI nr
Match: KAG2394644.1 (uncharacterized protein HKW66_Vig0079810 [Vigna angularis])

HSP 1 Score: 56.6 bits (135), Expect = 4.5e-04
Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 291 VAFWEAHSNRAHGPAGLPAIVGILPFPG 319
           +AFWEA S+R HGPAGLPA+VGILPFPG
Sbjct: 61  LAFWEARSHRTHGPAGLPAVVGILPFPG 88

The following BLAST results are available for this feature:
BLAST of Moc06g19610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG2270293.12.6e-0482.14hypothetical protein Bca52824_064848 [Brassica carinata][more]
KAG2394644.14.5e-0482.14uncharacterized protein HKW66_Vig0079810 [Vigna angularis][more]
BLAST of Moc06g19610 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g19610 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g19610 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g19610.1Moc06g19610.1mRNA