Moc06g19590 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g19590
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr6: 15417703 .. 15421361 (+)
RNA-Seq ExpressionMoc06g19590
SyntenyMoc06g19590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCTGATGATCATGAAGCGCTCAATTCTAGAAACGTTTAGAGGCTCTATTGTTGAGGGAACGAATGCCAAAGGTTTTTTAAAGGAAATGAAGCAGTACATTACCAAAAACGATATGGCAGAGGTGAGTACCCTTATGGCAAAACTCACCTCTTCAAGATACGTTGGTAAAGGAAACATCAGGGAATACATAATGAAAATATCAAATGTTGCAACAAAACTTAAAACACTGAAGTTGGAAGTTTCTGAAGACTTTTTAGTGGAATTTTTGGTGCTAGCATTCATGATTAAGTTAATGCATATCAAAGTACTTAATCTATGGAGTAATAAATCAATTAATATATTGTTGCAATTACTTAAAGAAGCTGTTCCTAATGATTGTAAAATTCCAAAGTCTTATTATGGTGCAAAAAAGATGTTACGAGATTTGGGTTTAGGATATGAAAAAAATACATGCTTGGAAGAATGATTGTATCTTATTTTGGAGAGAAATGAGCAAGCTGATGTTTGTCTACAATGCAACGTATCTCGTTACAAAACAAACAAGGGTAAAGGAAAAAAGATTCCACAAAAAATTTAAAATATTTCCCATTGAAGCCTTGATTGCAACGATTACTTTTGTCTAACCATACGCCAAAAGAAATGAGATGGTATAAGGGAAAAAAACTAGAAAATGAGGGGGTTTTAAGACATCGAACAGATGTTGTGGCGTGGAAAAATTTTGATAGACAACATTCTTGGTTCGCAGAAGAACCAAAAAATGTAAAATTAGCCTTGACTATTGATGATTGAATCCATTTGGAAGCATGAATTTGTCATAATGTGCCCAGTAATATTGATTCCATATAACTTGCCACTTGGAAATGTATGAAAGAATCATCTTTTTTCATGTCATTACTCATCCCCAGGAAAAGAGATAGACATTTATTTGCAACCATTGATAGAAAAGTTAAAAGAATTATGGTCTATCGGTGTTGATACGTATGATGCATGTAGTGGTAACAACTTTCGACTTCATCCAGCTTTGATAAGGACAATCAACAACTTTCCAACTTATGACAATTCATCAAGATGGAGTACGAAAGGATAAAAGACATGTCTAGTATGTAATAAGGACATTACGTCAGATAAATTGAATAGTAAGATATGCTACATGTGACATCGCCGATTCTTACCACAAAGTCATCATTAGCGAAAAAGCAAATAGTACAATGGGGAAAACAAAAAATAGAGTTGCACCACGACATTTTTCTAGATTATATGTTGTCCACTAGTTAGATTCCATTGTTTTTCCGCCACTTGGGAAAACTATCAACGTTTTACAGTGGAAACAGAAAGGACTTCATAGTGAATTTAATTGGGTGAAGAGAAGCATATTGTTTGAATTACCCTATTGGCAAAGTCTCAAAATTCGACACAAACTAGATGTCATGCACATCGAGAAGAATATTAGTGATAATGTCACGTGCACGTTATTAAATATTGAAGGGAAAATAAAGGACACCGATAAAGCACATAAGGATTTAATAAAATTGAACATACGTAAAGAATTACATCTCTGACAAGTTGGGAACAAATTGTTGAAATCGCATGCTAGCTACACTTTAACGGTAGATGAAAGAAAGAAGTTTTGTAGCTTTTTGAAAATCGTCAAATTCCCTTATAGTTTTGCATCGAACGTATCGAGATGTGTTAACGTTAAAGACAGAAAAATATATGGCCTGAAAAGTCATGACTCACAAGTGTTGCTGTAAAGAGTTTTACTAGTGGGGGTTCGTCCATTTTTGCCTTGTGATGTTAGTGGGGCTATTGCAGAACTATCGAATTTCTTTAAAGAATTGACTGCAACGACATTGAAAGTTGAGACGTTGAATAAGTTGCAAGATGCAATTGTATTGATTCTATGCAAATTTGAGAGAATATTCCCTATGGCGTTTTTCGATGTTATGGTTTATCTAGCTATCCACTTGCCTGAAGAAGCCAAACTAGTGGGATCTGTCGATTATAGCTAGACGTATCCTATTGAGAGGTATAAACCTTTATTTATATGTTTAGTTACAAAAGATATTTAGTGATATAACTAATTAATATCACATATGCTCATAGGAGTCTGAGGACACTGAAACAATATGTGAAAAATAAAGCTCGACTTGAAGGTTCTATAGCAGAAGCTATCATTGCGAATGAAGCATTGACGTTTTGCTCAATGTATCTGGATGGAATTGAAACCGAATTAAATAGGCCCATTCGAAATGATGACATGGTGGACTTAAGAGAATCAAAGGAACATCTTCCTGTATTTTCACAAAATGCACGTCCAATCGGTGGTTCACAACTGAAGGAATTATTGCCTGCTGAGTTGCTAAGGGCGCATTGGTATGTTCTATCCAATTGCGAAGCAGTGGATCCATATAGACTGTATGAACTTTCTTATACTCAAATTGGATAAATTTATTTTAAACATTATTGATTATTGGTATCGTCTCACAGAGAACATGAATTAGAATTACAACGAGAATGTAATGGTAATTTAGCTAGGTTGCACGAAGTTCCATTTCCATAATGGTTCAAAAGAAAAGTGAGTTTTACTACATGAAATTTTTTTATATCAACTATTTACTATGGTTCACTATTTCTATGACTTTTGTTCTTGTAAAATATGTCTCTAGATGACATCCAAAGTTTCTTCAAAGTCGGATGCTGTTGTGCATGAATTGAATACATTAGCATGTGGTCCTGATATTCGAATTCATTCGTATAATTGGTGTATTACGAATGAAGCTCGATTTAATTCGATAGATCGATGATCAATGCACAACACAAAATAGTGGAGTCTGTGTTATGGGTAGACATAACACTAAGTAATCTGATTTCTACGGTGTCATCAAAGAAGTTCTCGAATTGAGCTACACTAATAAAAAATGAGTACTATTGTTCAGGTGTGATTGGTATGATACGAATTCTAAGAAAAATCGTATTCTTCAGTACCATAATTTTACGAGCATAGACACACGTTATTTGTGGTGTCAGAACGAACGATTCATACTTGTCTCCCAAGCACAACAAGTATTTTATATTGAAGATCTGAAGTTAGGTAGTAGATGGAAAGTAGTTCAAAAAGTTGAACATAGACATTTATGGGATGTGCCAGAGATAGAAGAAGTTGACTTACAAGAACAAGTTATAAATCAGTGTCAAGTTGAAGAAGTGGATCTCGAAACACATACATTTTATAGAGATGATATAGAACCGATTATAATTTCCGACAATAATGATAGTCTCGAGATAGTATTAGATTTCGATGAGGTAATAAAGGAAGACATATTTGATGAGGAATAAGATGAAGATGAGGAAGAATGCAAAAATTATAAAACATCATAAGAAGAAGACGATGACGAAGAAAGCGATAACTTTGACACATACATATGATTGGTATATGAAATATCGTTTCAATGTTATGCAATATAATTGTGATAAAGTATTACAAGTGTGATAATTTTTTTTTATTTTGCAGGAACAATGTTGTTAGATAACGACTATGATGGAGAACTAGGAGTTCGCAGAGAATCTCGAGGAGTCGTGATGATAGTTGCAAATGGAGGTAATCCCATACCAATTTCGTGGACTGCAAAAGCAGCAAACCTGTTGGGTATCTAG

mRNA sequence

ATGTGTCTGATGATCATGAAGCGCTCAATTCTAGAAACGTTTAGAGGCTCTATTGTTGAGGGAACGAATGCCAAAGGTTTTTTAAAGGAAATGAAGCAGTACATTACCAAAAACGATATGGCAGAGGTGAGTACCCTTATGGCAAAACTCACCTCTTCAAGATACGTTGGTAAAGGAAACATCAGGGAATACATAATGAAAATATCAAATGTTGCAACAAAACTTAAAACACTGAAGTTGGAAGTTTCTGAAGACTTTTTAGTGGAATTTTTGGTGCTAGCATTCATGATTAAGAGTCTGAGGACACTGAAACAATATGTGAAAAATAAAGCTCGACTTGAAGGTTCTATAGCAGAAGCTATCATTGCGAATGAAGCATTGACGTTTTGCTCAATGTATCTGGATGGAATTGAAACCGAATTAAATAGGCCCATTCGAAATGATGACATGGTGGACTTAAGAGAATCAAAGGAACATCTTCCTGTATTTTCACAAAATGCACGTCCAATCGGTGGTTCACAACTGAAGGAATTATTGCCTGCTGAGTTGCTAAGGGCGCATTGGTGTGATTGGTATGATACGAATTCTAAGAAAAATCGTATTCTTCAGTACCATAATTTTACGAGCATAGACACACGTTATTTGTGGTGTCAGAACGAACGATTCATACTTGTCTCCCAAGCACAACAAGTATTTTATATTGAAGATCTGAAGTTAGGAACAATGTTGTTAGATAACGACTATGATGGAGAACTAGGAGTTCGCAGAGAATCTCGAGGAGTCGTGATGATAGTTGCAAATGGAGGTAATCCCATACCAATTTCGTGGACTGCAAAAGCAGCAAACCTGTTGGGTATCTAG

Coding sequence (CDS)

ATGTGTCTGATGATCATGAAGCGCTCAATTCTAGAAACGTTTAGAGGCTCTATTGTTGAGGGAACGAATGCCAAAGGTTTTTTAAAGGAAATGAAGCAGTACATTACCAAAAACGATATGGCAGAGGTGAGTACCCTTATGGCAAAACTCACCTCTTCAAGATACGTTGGTAAAGGAAACATCAGGGAATACATAATGAAAATATCAAATGTTGCAACAAAACTTAAAACACTGAAGTTGGAAGTTTCTGAAGACTTTTTAGTGGAATTTTTGGTGCTAGCATTCATGATTAAGAGTCTGAGGACACTGAAACAATATGTGAAAAATAAAGCTCGACTTGAAGGTTCTATAGCAGAAGCTATCATTGCGAATGAAGCATTGACGTTTTGCTCAATGTATCTGGATGGAATTGAAACCGAATTAAATAGGCCCATTCGAAATGATGACATGGTGGACTTAAGAGAATCAAAGGAACATCTTCCTGTATTTTCACAAAATGCACGTCCAATCGGTGGTTCACAACTGAAGGAATTATTGCCTGCTGAGTTGCTAAGGGCGCATTGGTGTGATTGGTATGATACGAATTCTAAGAAAAATCGTATTCTTCAGTACCATAATTTTACGAGCATAGACACACGTTATTTGTGGTGTCAGAACGAACGATTCATACTTGTCTCCCAAGCACAACAAGTATTTTATATTGAAGATCTGAAGTTAGGAACAATGTTGTTAGATAACGACTATGATGGAGAACTAGGAGTTCGCAGAGAATCTCGAGGAGTCGTGATGATAGTTGCAAATGGAGGTAATCCCATACCAATTTCGTGGACTGCAAAAGCAGCAAACCTGTTGGGTATCTAG

Protein sequence

MCLMIMKRSILETFRGSIVEGTNAKGFLKEMKQYITKNDMAEVSTLMAKLTSSRYVGKGNIREYIMKISNVATKLKTLKLEVSEDFLVEFLVLAFMIKSLRTLKQYVKNKARLEGSIAEAIIANEALTFCSMYLDGIETELNRPIRNDDMVDLRESKEHLPVFSQNARPIGGSQLKELLPAELLRAHWCDWYDTNSKKNRILQYHNFTSIDTRYLWCQNERFILVSQAQQVFYIEDLKLGTMLLDNDYDGELGVRRESRGVVMIVANGGNPIPISWTAKAANLLGI
Homology
[Close]
BLAST of Moc06g19590 vs. NCBI nr
Match: XP_022155096.1 (uncharacterized protein LOC111022228 [Momordica charantia])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30
Identity = 75/92 (81.52%), Postives = 82/92 (89.13%), Query Frame = 0 

Query: 1   MCLMIMKRSILETFRGSIVEGTNAKGFLKEMKQYITKNDMAEVSTLMAKLTSSRYVGKGN 60
           MCLMIMKRSI ETFRGSIVEGTNAK FLKEMKQY TKND AE STLM KLTSSRYVGKGN
Sbjct: 62  MCLMIMKRSIPETFRGSIVEGTNAKSFLKEMKQYFTKNDKAEASTLMTKLTSSRYVGKGN 121

Query: 61  IREYIMKISNVATKLKTLKLEVSEDFLVEFLV 93
           IREY M++S+VATKLK LKL+VSE+FLV  ++
Sbjct: 122 IREYKMQMSSVATKLKALKLKVSEEFLVHLVL 153

[Close]
BLAST of Moc06g19590 vs. NCBI nr
Match: XP_022156979.1 (uncharacterized protein LOC111023808 [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-30
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 1   MCLMIMKRSILETFRGSIVEGTNAKGFLKEMKQYITKNDMAEVSTLMAKLTSSRYVGKGN 60
           MCLMIMKRSI ETFRGSIVEGTNAKGFLKEM+QY TKND AE STLMAKLTSSRYVGKGN
Sbjct: 73  MCLMIMKRSIPETFRGSIVEGTNAKGFLKEMEQYFTKNDKAEASTLMAKLTSSRYVGKGN 132

Query: 61  IREYIMKISNVATKLKTLKLEV 83
           IREYIM++SNVATKLK LKLEV
Sbjct: 133 IREYIMQMSNVATKLKALKLEV 154

[Close]
BLAST of Moc06g19590 vs. NCBI nr
Match: XP_022152232.1 (uncharacterized protein LOC111020001 [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-29
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1   MCLMIMKRSILETFRGSIVEGTNAKGFLKEMKQYITKNDMAEVSTLMAKLTSSRYVGKGN 60
           M LMIMKRSI ETFRGSI+EGTNAKGFLKEM+QY TKND AE STLMAKLTSSRYVGKGN
Sbjct: 73  MFLMIMKRSIPETFRGSIIEGTNAKGFLKEMEQYFTKNDKAEASTLMAKLTSSRYVGKGN 132

Query: 61  IREYIMKISNVATKLKTLKLEVS 84
           IREYIM++SNVATKLK LKLEVS
Sbjct: 133 IREYIMQMSNVATKLKALKLEVS 155

[Close]
BLAST of Moc06g19590 vs. NCBI nr
Match: KAA0035742.1 (uncharacterized protein E6C27_scaffold403G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-24
Identity = 80/211 (37.91%), Postives = 104/211 (49.29%), Query Frame = 0 

Query: 98  KSLRTLKQYVKNKARLEGSIAEAIIANEALTFCSMYLDGIETELNRPIRNDDMVDLRESK 157
           +SLR LK+YV+NKAR EGSIAEA + NE+L FCSMYL GIET  NR  RN+D +D  E  
Sbjct: 292 RSLRYLKKYVRNKARPEGSIAEAYVINESLNFCSMYLRGIETRFNRGDRNNDDIDDEEIN 351

Query: 158 E-HLPVFSQNARPIGGSQLKELLPAELLRAHW-----CD--------------------- 217
              L +FSQ+ R +GG+  ++L P EL ++HW     CD                     
Sbjct: 352 NCGLSIFSQHIRWLGGAVFRQLTPDELEKSHWYILNNCDEVKPYLQEHMRILESSNGNGD 411

Query: 218 -----------WYDTNS------------------------------KKNRILQYHNFTS 241
                      W+   +                              +KNRI     FTS
Sbjct: 412 LYKRQQLEFPTWFKAKAQRLHCDKFISDDLYALACGPNDCARSYSGLRKNRINIVDGFTS 471

[Close]
BLAST of Moc06g19590 vs. NCBI nr
Match: TYK21879.1 (uncharacterized protein E5676_scaffold494G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 4.6e-24
Identity = 80/211 (37.91%), Postives = 103/211 (48.82%), Query Frame = 0 

Query: 98  KSLRTLKQYVKNKARLEGSIAEAIIANEALTFCSMYLDGIETELNRPIRNDDMVDLRESK 157
           +SL  LK+YV+NKAR EGSIAEA + NE+L FCSMYL GIET  NR  RN+D +D  E  
Sbjct: 261 RSLHYLKKYVRNKARPEGSIAEAYVINESLNFCSMYLRGIETRFNRGDRNNDDIDDEEIN 320

Query: 158 E-HLPVFSQNARPIGGSQLKELLPAELLRAHW-----CD--------------------- 217
              L +FSQ+ R +GG+  ++L P EL ++HW     CD                     
Sbjct: 321 NCGLSIFSQHIRWLGGAVFRQLTPDELEKSHWYILNNCDEVKPYLQEHMRILESSNGNGD 380

Query: 218 -----------WYDTNS------------------------------KKNRILQYHNFTS 241
                      W+   +                              +KNRI     FTS
Sbjct: 381 LYKRQQLEFPTWFKAKAQRLHCDKFISDDLYALACGPNDCARSYSGLRKNRINIVDGFTS 440

[Close]
BLAST of Moc06g19590 vs. ExPASy TrEMBL
Match: A0A6J1DQP2 (uncharacterized protein LOC111022228 OS=Momordica charantia OX=3673 GN=LOC111022228 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.5e-31
Identity = 75/92 (81.52%), Postives = 82/92 (89.13%), Query Frame = 0 

Query: 1   MCLMIMKRSILETFRGSIVEGTNAKGFLKEMKQYITKNDMAEVSTLMAKLTSSRYVGKGN 60
           MCLMIMKRSI ETFRGSIVEGTNAK FLKEMKQY TKND AE STLM KLTSSRYVGKGN
Sbjct: 62  MCLMIMKRSIPETFRGSIVEGTNAKSFLKEMKQYFTKNDKAEASTLMTKLTSSRYVGKGN 121

Query: 61  IREYIMKISNVATKLKTLKLEVSEDFLVEFLV 93
           IREY M++S+VATKLK LKL+VSE+FLV  ++
Sbjct: 122 IREYKMQMSSVATKLKALKLKVSEEFLVHLVL 153

[Close]
BLAST of Moc06g19590 vs. ExPASy TrEMBL
Match: A0A6J1DV67 (uncharacterized protein LOC111023808 OS=Momordica charantia OX=3673 GN=LOC111023808 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 1   MCLMIMKRSILETFRGSIVEGTNAKGFLKEMKQYITKNDMAEVSTLMAKLTSSRYVGKGN 60
           MCLMIMKRSI ETFRGSIVEGTNAKGFLKEM+QY TKND AE STLMAKLTSSRYVGKGN
Sbjct: 73  MCLMIMKRSIPETFRGSIVEGTNAKGFLKEMEQYFTKNDKAEASTLMAKLTSSRYVGKGN 132

Query: 61  IREYIMKISNVATKLKTLKLEV 83
           IREYIM++SNVATKLK LKLEV
Sbjct: 133 IREYIMQMSNVATKLKALKLEV 154

[Close]
BLAST of Moc06g19590 vs. ExPASy TrEMBL
Match: A0A6J1DFM1 (uncharacterized protein LOC111020001 OS=Momordica charantia OX=3673 GN=LOC111020001 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.9e-30
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1   MCLMIMKRSILETFRGSIVEGTNAKGFLKEMKQYITKNDMAEVSTLMAKLTSSRYVGKGN 60
           M LMIMKRSI ETFRGSI+EGTNAKGFLKEM+QY TKND AE STLMAKLTSSRYVGKGN
Sbjct: 73  MFLMIMKRSIPETFRGSIIEGTNAKGFLKEMEQYFTKNDKAEASTLMAKLTSSRYVGKGN 132

Query: 61  IREYIMKISNVATKLKTLKLEVS 84
           IREYIM++SNVATKLK LKLEVS
Sbjct: 133 IREYIMQMSNVATKLKALKLEVS 155

[Close]
BLAST of Moc06g19590 vs. ExPASy TrEMBL
Match: A0A5A7SWV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00130 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-24
Identity = 80/211 (37.91%), Postives = 104/211 (49.29%), Query Frame = 0 

Query: 98  KSLRTLKQYVKNKARLEGSIAEAIIANEALTFCSMYLDGIETELNRPIRNDDMVDLRESK 157
           +SLR LK+YV+NKAR EGSIAEA + NE+L FCSMYL GIET  NR  RN+D +D  E  
Sbjct: 292 RSLRYLKKYVRNKARPEGSIAEAYVINESLNFCSMYLRGIETRFNRGDRNNDDIDDEEIN 351

Query: 158 E-HLPVFSQNARPIGGSQLKELLPAELLRAHW-----CD--------------------- 217
              L +FSQ+ R +GG+  ++L P EL ++HW     CD                     
Sbjct: 352 NCGLSIFSQHIRWLGGAVFRQLTPDELEKSHWYILNNCDEVKPYLQEHMRILESSNGNGD 411

Query: 218 -----------WYDTNS------------------------------KKNRILQYHNFTS 241
                      W+   +                              +KNRI     FTS
Sbjct: 412 LYKRQQLEFPTWFKAKAQRLHCDKFISDDLYALACGPNDCARSYSGLRKNRINIVDGFTS 471

[Close]
BLAST of Moc06g19590 vs. ExPASy TrEMBL
Match: A0A5D3DEV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold494G00120 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-24
Identity = 80/211 (37.91%), Postives = 103/211 (48.82%), Query Frame = 0 

Query: 98  KSLRTLKQYVKNKARLEGSIAEAIIANEALTFCSMYLDGIETELNRPIRNDDMVDLRESK 157
           +SL  LK+YV+NKAR EGSIAEA + NE+L FCSMYL GIET  NR  RN+D +D  E  
Sbjct: 261 RSLHYLKKYVRNKARPEGSIAEAYVINESLNFCSMYLRGIETRFNRGDRNNDDIDDEEIN 320

Query: 158 E-HLPVFSQNARPIGGSQLKELLPAELLRAHW-----CD--------------------- 217
              L +FSQ+ R +GG+  ++L P EL ++HW     CD                     
Sbjct: 321 NCGLSIFSQHIRWLGGAVFRQLTPDELEKSHWYILNNCDEVKPYLQEHMRILESSNGNGD 380

Query: 218 -----------WYDTNS------------------------------KKNRILQYHNFTS 241
                      W+   +                              +KNRI     FTS
Sbjct: 381 LYKRQQLEFPTWFKAKAQRLHCDKFISDDLYALACGPNDCARSYSGLRKNRINIVDGFTS 440

The following BLAST results are available for this feature:
BLAST of Moc06g19590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155096.11.1e-3081.52uncharacterized protein LOC111022228 [Momordica charantia][more]
XP_022156979.12.5e-3090.24uncharacterized protein LOC111023808 [Momordica charantia][more]
XP_022152232.11.6e-2987.95uncharacterized protein LOC111020001 [Momordica charantia][more]
KAA0035742.12.7e-2437.91uncharacterized protein E6C27_scaffold403G00130 [Cucumis melo var. makuwa][more]
TYK21879.14.6e-2437.91uncharacterized protein E5676_scaffold494G00120 [Cucumis melo var. makuwa][more]
BLAST of Moc06g19590 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g19590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DQP25.5e-3181.52uncharacterized protein LOC111022228 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DV671.2e-3090.24uncharacterized protein LOC111023808 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DFM17.9e-3087.95uncharacterized protein LOC111020001 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A5A7SWV91.3e-2437.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DEV92.2e-2437.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Moc06g19590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025312Domain of unknown function DUF4216PFAMPF13952DUF4216coord: 189..238
e-value: 7.0E-12
score: 45.5
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 14..92
e-value: 7.6E-7
score: 29.0
NoneNo IPR availablePANTHERPTHR35317OS04G0629600 PROTEINcoord: 1..117
NoneNo IPR availablePANTHERPTHR35317:SF3TRANSMEMBRANE PROTEINcoord: 1..117
IPR025452Domain of unknown function DUF4218PFAMPF13960DUF4218coord: 98..147
e-value: 9.8E-15
score: 54.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g19590.1Moc06g19590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding