Moc06g19300 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g19300
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr6: 15157771 .. 15160449 (-)
RNA-Seq ExpressionMoc06g19300
SyntenyMoc06g19300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACGGGTGCAAGATCAGGAAGTCAAGTTTTCAGTCTATGACTCCATAAAATGTCCTGCTAAATCAGAAGAATGCTCAATGTTAAAGATTTTGGATGAAGCTCTAATAGAGAAGTTGGAAGCAAAAGTGATGCTGAAGCATTTGAAAAATACTGAGCCGTCAGATGCCCCAGCACAGCATGCAGAAGCTAGTGAAAGCCAACAAAGTGGAGAGATGGTAGATGCTCTAGCATCTTGTGCCTTCAATGAAGAACAGAGCCTTACAACCCCTGTAGATAAAATGCACATCATTGTAGAGGAAAAGCCGGCAAACTTACCTAAAAAAAAGCCACCCGACATTAAGCCGATTCTAAAAGCTTCAGAAGCAAGGACGAGGAGACCGAAAATAGAGCTGGAATCGTCATGCATCAAAGAGAAAAAGGTAAAATCTTCCAAGTATTCGGCCAAGGTACGAATTGAGCAAGCAGAAGTAACTCCAGTCACCACTTCCAAGAAAAACAAAAGGGTAAAAAAAAAAGAATTTTCGTGTCCCCAACTGAGGGGAAGATGTATGCTGTAGCTATTTCATAGGAGCATGCCCCAGCAGCAAAGAGGGGGAAGAAGACAATGGATCTAGAGAGGAAGATCAGCCCACGAGCGACTCGTTGGATGGAAAAGAAGGCAAAAAATATTGACATGCTTGACCCGCGAGAGGGAAGTTCCTTTCCTTTTTACTCTGAAAAATGACCCCCACCCCCAGTTGTTGTTACTTTTTATTTTCCTTAGTCTAGTTTAGTTCAGTTTTAATTCATGCATTTTAAATTTCTATCTTTCAAATCGTCTTTGCATATTTTTTCTTTTTTGTAGATCAGTATGTGAATCCCCCTGAATTTAATGCAAAGAAGTTAGCAAATCCTGTGTTCTCAACGTCTGTCTTTTGCCCTACCCCGTATGTATAGTATTGATGCTAGAGCCTGCTAGTGCGCAGTTTTTCTGTTGATGCTGGAGCATTTTAATGAGTGTTAGCTTTCTTTTGTTCATCTTCTAGTTCATGTTTCATGCCCATGCCCTAGCATCCCTCTCGTAGTACTGGCCCCAGGTAGCGCTTACTCTAGGGAGGAATTTCAATGGCTATCTATCCAAAGCCACCCTTATCTTTGTATAGCTAGCATGAACCTCTTTCTTTAAGATCCCCTAGTTGGTAGCAAGCACCCCTTACTCATCTACGTATACACTTAGCGACCATTCCTCTCAGGCTCATATTAGTCGTACTTTAAGTTTGGGGGTGTGTTAGAGCATTACAATCTAGATGTCCTTAGCTGCATTGAAGACACTGCAACTTTTTAAGTTTGGGGGAGTGAACGTTCAGTTCTTACGTCTTTATTAGCAATTGTATAGAATCATGAATCTTTCTAATCCTGTAATTTAGCCCTAAAAAAAAACTCAATAAAGGAGGGGCTAGTAGCCCACATCTAGAGCACAAAGAGGCTTCAGGATCAGGAAGGGCTAGTAGCCCATGGTTAAGAAGCCCAAGTGAGTAGTACAAGGTTTAAAGGTTTAGACTAGTAAAAGGGGCTTGAGAAATGAATCTCTAGGAGAAGTTAAGCTTGAGGTTGGGAAGTAGAAGGAAGCTAGAGTTGGGCAGAAAATAGCGTCTTCCAGAGTGTGAACAAATCTAGGCTACTTTCATTTCTTTGCCCCAACTGAAGCACTATAGCAGAATATGTAAGTTCTAGCATTGACGATCAAGGTAAAGGTTTGAGGCATAGAACTGAATGTTTGAAGTGCAGGTTTCTAACGTTCTTTTTTTGTGAAAAGAGGGAAAAATGTATGCTCTTGCTTGAGGACAAGCAAGATTTTAAATTTGGGGGTGTGATAACTCTCCAAAAGAGAGTTATTCTGGTATTTATTTGGGTGAAAATGTGCATTAAAATGTCAAAGTGTGTCGGTTGTATGTCATAATTAGCATGAATAGTGTTAAAATTTAAATTCTTAGCTAAATATCCTTAGTCTTGATAACTTTGGCCAAAAACAGCATAAACTCTCATATTTGTGGTTCATTTGCACAGATTTTTAAAGAAGAGCTAAGAAGAGAAGGAAGTGTTGAACTAGAGAAGAGCAGTCAAAGCATTTTCAAAATAGAGCATATACAAGCTAGAGTATAGCGATGCCAGAGCATGGAGTGACCGTACAGTTAATTCCAAAAACACGGGATTTACTGTGTCCGTACAATTTTCGGGTGGGTGCCCTAAATTTAGAACCCAATATAAAATGGGAGTGTTGCCTTAGTCGCTACACACACAAAGGCCAAGGGAGACAAAATTTGCGGGCTGAAAAGACCAAGGAAGGGAAGATACTCATTTTCGGGAGGAGAGCTGACGCCAGAAAGGGGAAGCTCGTCTGCTGCTTTACGTTGACTGCTCTTCTTCTCTGTCATTTAGCTAATTTTCTGCTATGGGTTGTATTTCTTCTTCTTCCATTTTGTTTTCTTCACCCATTATAAGCTTAAACCCATTTCGGGGGAAGTTCACACACTGTAACTGACTTGAGACCGAATCTCTAGCACGCTATATTTATTTTTAAGCAAATTTGAATTTATTTCTCAATTCTTCACGTTACTGTTGTTGGCCACTGTTTCGTGTATGCTAGCTCCGATATTGACCCGGAAGGGCTTGTGGGTGCTGACTTGTTTTGCTAG

mRNA sequence

ATGGTACGGGTGCAAGATCAGGAAGTCAAGTTTTCAGTCTATGACTCCATAAAATGTCCTGCTAAATCAGAAGAATGCTCAATGTTAAAGATTTTGGATGAAGCTCTAATAGAGAAGTTGGAAGCAAAAGTGATGCTGAAGCATTTGAAAAATACTGAGCCGTCAGATGCCCCAGCACAGCATGCAGAAGCTAGTGAAAGCCAACAAAGTGGAGAGATGGTAGATGCTCTAGCATCTTGTGCCTTCAATGAAGAACAGAGCCTTACAACCCCTGTAGATAAAATGCACATCATTGTAGAGGAAAAGCCGGCAAACTTACCTAAAAAAAAGCCACCCGACATTAAGCCGATTCTAAAAGCTTCAGAAGCAAGGACGAGGAGACCGAAAATAGAGCTGGAATCGTCATGCATCAAAGAGAAAAAGGTAAAATCTTCCAAGTATTCGGCCAAGGAGCATGCCCCAGCAGCAAAGAGGGGGAAGAAGACAATGGATCTAGAGAGGAAGATCAGCCCACGAGCGACTCGTTGGATGGAAAAGAAGGCAAAAAATATTGACATGCTTGACCCGCGAGAGGGAAATCAGTATGTGAATCCCCCTGAATTTAATGCAAAGAAGTTAGCAAATCCTGTGTTCTCAACGTCTGTCTTTTGCCCTACCCCCTCCGATATTGACCCGGAAGGGCTTGTGGGTGCTGACTTGTTTTGCTAG

Coding sequence (CDS)

ATGGTACGGGTGCAAGATCAGGAAGTCAAGTTTTCAGTCTATGACTCCATAAAATGTCCTGCTAAATCAGAAGAATGCTCAATGTTAAAGATTTTGGATGAAGCTCTAATAGAGAAGTTGGAAGCAAAAGTGATGCTGAAGCATTTGAAAAATACTGAGCCGTCAGATGCCCCAGCACAGCATGCAGAAGCTAGTGAAAGCCAACAAAGTGGAGAGATGGTAGATGCTCTAGCATCTTGTGCCTTCAATGAAGAACAGAGCCTTACAACCCCTGTAGATAAAATGCACATCATTGTAGAGGAAAAGCCGGCAAACTTACCTAAAAAAAAGCCACCCGACATTAAGCCGATTCTAAAAGCTTCAGAAGCAAGGACGAGGAGACCGAAAATAGAGCTGGAATCGTCATGCATCAAAGAGAAAAAGGTAAAATCTTCCAAGTATTCGGCCAAGGAGCATGCCCCAGCAGCAAAGAGGGGGAAGAAGACAATGGATCTAGAGAGGAAGATCAGCCCACGAGCGACTCGTTGGATGGAAAAGAAGGCAAAAAATATTGACATGCTTGACCCGCGAGAGGGAAATCAGTATGTGAATCCCCCTGAATTTAATGCAAAGAAGTTAGCAAATCCTGTGTTCTCAACGTCTGTCTTTTGCCCTACCCCCTCCGATATTGACCCGGAAGGGCTTGTGGGTGCTGACTTGTTTTGCTAG

Protein sequence

MVRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKHLKNTEPSDAPAQHAEASESQQSGEMVDALASCAFNEEQSLTTPVDKMHIIVEEKPANLPKKKPPDIKPILKASEARTRRPKIELESSCIKEKKVKSSKYSAKEHAPAAKRGKKTMDLERKISPRATRWMEKKAKNIDMLDPREGNQYVNPPEFNAKKLANPVFSTSVFCPTPSDIDPEGLVGADLFC
Homology
[Close]
BLAST of Moc06g19300 vs. NCBI nr
Match: XP_022158993.1 (uncharacterized protein LOC111025437 [Momordica charantia])

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-09
Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKHLKNTE 54
           +RVQDQEVKFSVYDS+K P +S+ECS+LKILDEAL+E+LE + MLKHL   E
Sbjct: 110 MRVQDQEVKFSVYDSMKFPTESKECSVLKILDEALMEELEIEAMLKHLXFVE 161

[Close]
BLAST of Moc06g19300 vs. NCBI nr
Match: XP_022149795.1 (uncharacterized protein LOC111018140 [Momordica charantia])

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-07
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 1   MVRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKH 49
           M+ VQD EVKFSVYDS+K PA+SEECS+LKIL+EALI +  A+ ML+H
Sbjct: 250 MIHVQDHEVKFSVYDSMKLPAESEECSVLKILNEALIGESNAEAMLEH 297

[Close]
BLAST of Moc06g19300 vs. NCBI nr
Match: XP_022159043.1 (uncharacterized protein LOC111025484 [Momordica charantia])

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-07
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKH 49
           + VQDQEVKFSVYDS+K PA+SEE  +LKILDEAL+E+L A+ ML+H
Sbjct: 97  MHVQDQEVKFSVYDSMKFPAESEEYXVLKILDEALVEELSAEAMLEH 143

[Close]
BLAST of Moc06g19300 vs. NCBI nr
Match: XP_022144016.1 (uncharacterized protein LOC111013805 [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-06
Identity = 33/49 (67.35%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKHLK 51
           + VQDQEVKFSV++S+K  A+SEECS+LKILDEAL+E+LE +VML+ L+
Sbjct: 320 MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELEXEVMLERLE 368

[Close]
BLAST of Moc06g19300 vs. NCBI nr
Match: XP_022157061.1 (uncharacterized protein LOC111023871 [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-06
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVML 47
           +RVQDQEVKFSVYDSIK   +SEEC +LKILDEAL+EKLE + +L
Sbjct: 115 MRVQDQEVKFSVYDSIKFSIESEECKVLKILDEALMEKLEEEAIL 159

[Close]
BLAST of Moc06g19300 vs. ExPASy TrEMBL
Match: A0A6J1DXL0 (uncharacterized protein LOC111025437 OS=Momordica charantia OX=3673 GN=LOC111025437 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-09
Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKHLKNTE 54
           +RVQDQEVKFSVYDS+K P +S+ECS+LKILDEAL+E+LE + MLKHL   E
Sbjct: 110 MRVQDQEVKFSVYDSMKFPTESKECSVLKILDEALMEELEIEAMLKHLXFVE 161

[Close]
BLAST of Moc06g19300 vs. ExPASy TrEMBL
Match: A0A6J1D6R2 (uncharacterized protein LOC111018140 OS=Momordica charantia OX=3673 GN=LOC111018140 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-07
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 1   MVRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKH 49
           M+ VQD EVKFSVYDS+K PA+SEECS+LKIL+EALI +  A+ ML+H
Sbjct: 250 MIHVQDHEVKFSVYDSMKLPAESEECSVLKILNEALIGESNAEAMLEH 297

[Close]
BLAST of Moc06g19300 vs. ExPASy TrEMBL
Match: A0A6J1DXQ8 (uncharacterized protein LOC111025484 OS=Momordica charantia OX=3673 GN=LOC111025484 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKH 49
           + VQDQEVKFSVYDS+K PA+SEE  +LKILDEAL+E+L A+ ML+H
Sbjct: 97  MHVQDQEVKFSVYDSMKFPAESEEYXVLKILDEALVEELSAEAMLEH 143

[Close]
BLAST of Moc06g19300 vs. ExPASy TrEMBL
Match: A0A6J1CS22 (uncharacterized protein LOC111013805 OS=Momordica charantia OX=3673 GN=LOC111013805 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.9e-07
Identity = 33/49 (67.35%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVMLKHLK 51
           + VQDQEVKFSV++S+K  A+SEECS+LKILDEAL+E+LE +VML+ L+
Sbjct: 320 MHVQDQEVKFSVHNSMKFSAESEECSVLKILDEALMEELEXEVMLERLE 368

[Close]
BLAST of Moc06g19300 vs. ExPASy TrEMBL
Match: A0A6J1DWU8 (uncharacterized protein LOC111023871 OS=Momordica charantia OX=3673 GN=LOC111023871 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.9e-07
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 2   VRVQDQEVKFSVYDSIKCPAKSEECSMLKILDEALIEKLEAKVML 47
           +RVQDQEVKFSVYDSIK   +SEEC +LKILDEAL+EKLE + +L
Sbjct: 115 MRVQDQEVKFSVYDSIKFSIESEECKVLKILDEALMEKLEEEAIL 159

The following BLAST results are available for this feature:
BLAST of Moc06g19300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158993.13.4e-0971.15uncharacterized protein LOC111025437 [Momordica charantia][more]
XP_022149795.13.2e-0768.75uncharacterized protein LOC111018140 [Momordica charantia][more]
XP_022159043.15.5e-0770.21uncharacterized protein LOC111025484 [Momordica charantia][more]
XP_022144016.11.2e-0667.35uncharacterized protein LOC111013805 [Momordica charantia][more]
XP_022157061.11.2e-0673.33uncharacterized protein LOC111023871 [Momordica charantia][more]
BLAST of Moc06g19300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g19300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXL01.7e-0971.15uncharacterized protein LOC111025437 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D6R21.6e-0768.75uncharacterized protein LOC111018140 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DXQ82.7e-0770.21uncharacterized protein LOC111025484 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1CS225.9e-0767.35uncharacterized protein LOC111013805 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DWU85.9e-0773.33uncharacterized protein LOC111023871 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Moc06g19300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g19300.1Moc06g19300.1mRNA