Moc06g18870 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g18870
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC110412945
Location	chr6: 14719407 .. 14722718 (-)
RNA-Seq Expression	Moc06g18870
Synteny	Moc06g18870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAATTTCGAGACGCAATTGGGACAGCTCGCCAATGAATTGAAGAATAGACCACAAGGTTCTTTTCCAGGCCATACTGAATTACCAAAACGAGAAGGGAAAGAACAGTGCAAAGCTATCACCCTTAGGAGTGGACTGGCATATGATGGACCAACAATGCCAACAACAGATGTACAAATTCCGTCCACTGAACCAATTGTAAAGATACCAGAAAATCCAACAACACCAGAAAAAGAAAATACTAGAAAAGGTAATGAGGACACCCCGAGTGTTCCTCCACAGGTACAACTTTCTTTTACCCCTACTCCGACAGCAGCTGAGTAAGCCCAGTACAGTGTGTACCAAAGAAAGGGGGTATAACCGTGGTGGCCAACGAGGAGAATGAGCTCATCTCAACCCGAACTGTGAGTGGGTGGAGAGTTTGCATTGACTATCGCAAACTCAACAAGGTAACGAAGAAAGACCATTTTCCTCTACCGTTTATTGACCAGATGCTCGATCGTCTGGCAGGTAAGGATTTCTATTGTTTCTTAGATGGATATTCGGGTTATAATCAAATTACTATTGCTCCAGAAGACCAGGAGAAGAAAACATTTACGTGTCCGTATGGTACGTTCGCTTTCAAGCGAATGCCCTTTGGACTATGCAATGCACCCGCGACTTTTCAGAGGTGTATGATGGCCATCTTCTCTGACATGGTAAAAAATATCCTAGGAGTTTTTATGGATGACTTTTCTGTTTTTGGAAATTCTTTTGACGCATGTTTAGTTAATTTGGAGAGAGTCTTGGAAAGATGTGAACAAACAAACCTAGTCCTAAATTGGGAGAAGTGTCATTTCATTGTACAAGAGGGTATTGTTTTGGGTCACAAAATTTCCAAGCAAGGAATAGAGGTAGACCACGCTAAGATAGACATCATTTCAAAGCTACCTCCTCCTACAAATGTCAAAGGGATTAGAAGTTTTTTAGGGCATGGGGGATTTTACCGCCGCTTTATAAAAGACTTTGCTAAAATTTCTAAACCTTTGTGTCAAATGTTAGAACATGATAGACTATTTGTTTTTTATGATGACTGTTTAAAATCATTTGAAATGTTGAAAGTTGCTCTAAGTTCAGCCCCTATAATTATTGAACCTAATTGGGATTTACCTTTCGAGCTCATGTGTGATGCTAGTGATTATGCAATAGGAGCTATGTTAGGACAACGTAAAAACAAGATCTTGCATCCTGTGTATTATGCTAGTAAGACTCTGACCGGTGCACAACTCAATTACACTACTACTGAAAAGGAACTGTTAGCAGTTGTGTTCGCCTTTGATAAGTTTAGGTCTTACTTAATAGGCATAAAAGTCATTGTTTTTACTGACCATTCTGCTTTAAAATATTTATTTGCTAAAAAAGATGCGAAGCCACGTTTGATACGGTGGATTTTGTTACTTCAAGAGTTTGATATTGAAGTTAGGGACAGGAAGGGTACTGAAAACCAAGTTGCTGATCACCTGTCTAGATTGGAATCCCCGCTCTGTGATGATGGAACTGTTATACGTGAACAGTTTATTGACGAGCAACTCTTGCGAGTTGATTCAGTTCCGTGGTATGCCGATATAGCAAATTATTTGGTATGTCGAATAGTTCCTTATGAGTTCAACAAGCAACAGGTAAAGAAATTTCTAAATGAAATTCGATTTTATCATTGGGATGAGCCTTTTTTATATAAGCTAGGACCTGACAATATCTTACGCAGGTGTGTCGCAGAAGAAGAGCACGAGGCGATATTAGACGCTTGTCATATGTCTCCATATGGAGGACATTTTGCAGGACACAAAACCGCAGCCAAAGTTTTGCAAAGTGGGTTCTTTTGGCCCACTCTGTTCAAAGATGCACATAAGTTTGCCCAGGTTTGTGACAAATGCCAACGGACAGGTAGTATATCTAAACGCCACGAAATGCCTCAAACCCCGATCCTGGAGATTGAAATATTTGATGTGTGGGGTATAGATTTTATGGGTCCATTTCCATCTTCTAATGGTAAGCTTTATATATTGTTAGCAGTAGATTATGTTTCGAAATGGATAGAAGCCATTGCAACTGCTACCAATGATTCTAAAGTTGTCATTCGTTTTCTGCAAAAGCACATTTTTACGCGTTATGGAACCCCGCGTTGTCTGATAAGCGATGGGGGGGCTCATTTTGTGAATAGGTCTATGCAAAAGTTGCTGGCTAAATACAATGTGCGTCATAGGGTTGCAACAGCATATCATCCTCAGTCGAATGAGTTAGCCGAAATATCTAATAGGGAGATAAAAAACATTTTAGAAAAAACTGTAAATCTTAACCGTAGGGATTGGTCTTTGAAGCTTGATGATTCACTTTGGGCATATAGGACAGCATTTAAGACTCCCCTCGGCATGTCCCCCTATAGGCTAGTTTTTGGAAAAGCATGCATTTACCTCTTGAGCTAGAATATAAAGCATTTTGGGCTACTAAGAAATTAAATTTTGATTTGTCGGCTGCAGGTGAAGCGAGGAAGTTACAATTGTTGGAATTAGAAGAACACAGGCACTTTTCTTATGAGAATGCTAAGTTGTTTAAGGAAAAAACTAAACAGTGGCATGATAGGCGTCTTCGGCCGAACAATCTTCAAGAAGGTGATCTGGTTCTGTTATTCAATTCTAGGTTGAAACTTTTTCCTGGGAAACTTAAGTCTAGATGGTTTGGTCCCTTTAAAGTTTTTAAAGTCTACCCATATGGGGCAGTGGATCTAGTTGACTCTAAGGGAAGTATTTTTAAAGTAAATGGGCAGAGACTTAAGCCGTATTTTGGAGAACCAGTGGATAGAGGAAAAACCTCTATTCAACTTTCAGGTCAATAAATGTTTGCGAAAAATGTTTTTCCTTCTTATCCGTTTTTTAAAGAACAAAAGTAAAGGAAGGAAGTCTTTGTATCTTGTATATTATTTTTGTTTAATTATAAAAAGTTTTTCTTATTAAGAGAATGTTTTTGAAAACGTTAAAAAAAACAAAAAAAAAGAAAGAAAAAAAAACGTTGAGAAAAAAAAAAGAATTACGCAGGCGCTTGGCGCCTGCCCTTTGCGAAAAATAAAAATCACGCGGGCGCCTGGCGCCTGCCCTGTTTTTCCAGCATTTCGAAAACTCTCAGGTTCGAGAAGTCGTGCAACATATCTACAACATGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCGACTTCATGA

mRNA sequence

ATGAGGAATTTCGAGACGCAATTGGGACAGCTCGCCAATGAATTGAAGAATAGACCACAAGGTTCTTTTCCAGGCCATACTGAATTACCAAAACGAGAAGGGAAAGAACAGTGCAAAGCTATCACCCTTAGGAGTGGACTGGCATATGATGGACCAACAATGCCAACAACAGATGTACAAATTCCGTCCACTGAACCAATTGTAAAGATACCAGAAAATCCAACAACACCAGAAAAAGAAAATACTAGAAAAGGTAATGAGGACACCCCGAGTGTTCCTCCACAGGTTCGAGAAGTCGTGCAACATATCTACAACATGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCGACTTCATGA

Coding sequence (CDS)

ATGAGGAATTTCGAGACGCAATTGGGACAGCTCGCCAATGAATTGAAGAATAGACCACAAGGTTCTTTTCCAGGCCATACTGAATTACCAAAACGAGAAGGGAAAGAACAGTGCAAAGCTATCACCCTTAGGAGTGGACTGGCATATGATGGACCAACAATGCCAACAACAGATGTACAAATTCCGTCCACTGAACCAATTGTAAAGATACCAGAAAATCCAACAACACCAGAAAAAGAAAATACTAGAAAAGGTAATGAGGACACCCCGAGTGTTCCTCCACAGGTTCGAGAAGTCGTGCAACATATCTACAACATGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGACACTGATCCTAGTCCACAACCTCCGACTTCATGA

Protein sequence

MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQIPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQVREVVQHIYNMRASLDFAVLPSWPPALAAILGHPSSSTDTDPSPQPPTS

Homology

[Close]

BLAST of Moc06g18870 vs. NCBI nr
Match: XP_022159345.1 (uncharacterized protein LOC111025764 [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41
Identity = 88/98 (89.80%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRNFETQLGQLANELKNRPQGSFP HTELPKREGKEQCKA+TLRSGLAYD PTMPT DVQ
Sbjct: 229 MRNFETQLGQLANELKNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYDEPTMPTADVQ 288

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQVRE 99
           IPST P VKIPENPTTPEK N RKGNEDTPSVPPQ+ E
Sbjct: 289 IPSTGPTVKIPENPTTPEKXNIRKGNEDTPSVPPQILE 326

[Close]

BLAST of Moc06g18870 vs. NCBI nr
Match: XP_022158408.1 (uncharacterized protein LOC111024897, partial [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-40
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRNF TQLG LANELKNRPQGSFPGHTELP+REGKEQCKA+TLRSGL YDGPTMPTTDVQ
Sbjct: 456 MRNFGTQLGHLANELKNRPQGSFPGHTELPRREGKEQCKAVTLRSGLTYDGPTMPTTDVQ 515

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQ 96
           IPST+P VKIPENPTTPEKEN RKGN+DT SVPPQ
Sbjct: 516 IPSTKPTVKIPENPTTPEKENIRKGNKDTSSVPPQ 550

[Close]

BLAST of Moc06g18870 vs. NCBI nr
Match: XP_022158979.1 (uncharacterized protein LOC111025424 [Momordica charantia])

HSP 1 Score: 117.9 bits (294), Expect = 7.4e-23
Identity = 61/79 (77.22%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRNFETQLG LAN LKNRPQGSF GHTELPK EGKE CKA+TLRSGL Y+ PTMPTTDVQ
Sbjct: 139 MRNFETQLGXLANXLKNRPQGSFXGHTELPKXEGKEXCKAVTLRSGLXYBXPTMPTTDVQ 198

Query: 61  IPSTEPIVKIPENPTTPEK 80
           I STEP   I E PT  +K
Sbjct: 199 IXSTEP--TIVEPPTLEQK 215

[Close]

BLAST of Moc06g18870 vs. NCBI nr
Match: XP_022155224.1 (uncharacterized protein LOC111022366 [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 4.2e-18
Identity = 60/123 (48.78%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRN E Q+GQLAN+LK RPQGS PGHTE+PKR GKEQCKA+TLRSGL+Y+GP M   +V+
Sbjct: 1   MRNLERQVGQLANDLKARPQGSIPGHTEVPKRYGKEQCKAVTLRSGLSYEGPKM-LVEVK 60

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQVREVVQHIYNMRASLDFAVLPSWPP 120
            PST     I   P+  +KE T  G  +     PQ +              FA +P +P 
Sbjct: 61  KPST----SIQNAPSEAKKEKTTSGEGEASGSSPQKKS------------SFAPIPPFPQ 106

Query: 121 ALA 124
            LA
Sbjct: 121 RLA 106

[Close]

BLAST of Moc06g18870 vs. NCBI nr
Match: XP_022155996.1 (uncharacterized protein LOC111022971 [Momordica charantia])

HSP 1 Score: 101.7 bits (252), Expect = 5.5e-18
Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRN E Q+GQL+N+LK RPQGSFP HTE+PKR+GKEQCKA+TLRSGL+Y+ P MP  +V+
Sbjct: 1   MRNLEVQIGQLSNDLKARPQGSFPWHTEVPKRDGKEQCKAVTLRSGLSYERPKMP-VEVE 60

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQVREVVQHIYNMRASLDFAVLPSWPP 120
            PST     I  +P+  EKE T  G  +      Q             +  F ++P +P 
Sbjct: 61  KPST----SIQNSPSEAEKEKTTSGEGEASGASSQ------------ENSSFLLIPPFPQ 106

Query: 121 ALA 124
            LA
Sbjct: 121 ILA 106

[Close]

BLAST of Moc06g18870 vs. ExPASy TrEMBL
Match: A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.7e-42
Identity = 88/98 (89.80%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRNFETQLGQLANELKNRPQGSFP HTELPKREGKEQCKA+TLRSGLAYD PTMPT DVQ
Sbjct: 229 MRNFETQLGQLANELKNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYDEPTMPTADVQ 288

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQVRE 99
           IPST P VKIPENPTTPEK N RKGNEDTPSVPPQ+ E
Sbjct: 289 IPSTGPTVKIPENPTTPEKXNIRKGNEDTPSVPPQILE 326

[Close]

BLAST of Moc06g18870 vs. ExPASy TrEMBL
Match: A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.0e-41
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRNF TQLG LANELKNRPQGSFPGHTELP+REGKEQCKA+TLRSGL YDGPTMPTTDVQ
Sbjct: 456 MRNFGTQLGHLANELKNRPQGSFPGHTELPRREGKEQCKAVTLRSGLTYDGPTMPTTDVQ 515

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQ 96
           IPST+P VKIPENPTTPEKEN RKGN+DT SVPPQ
Sbjct: 516 IPSTKPTVKIPENPTTPEKENIRKGNKDTSSVPPQ 550

[Close]

BLAST of Moc06g18870 vs. ExPASy TrEMBL
Match: A0A6J1E110 (uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025424 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.1e-23
Identity = 62/79 (78.48%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRNFETQLG LAN LKNRPQGSF GHTELPK EGKE CKA+TLRSGL YD PTMPTTDVQ
Sbjct: 139 MRNFETQLGXLANXLKNRPQGSFXGHTELPKXEGKEXCKAVTLRSGLXYDXPTMPTTDVQ 198

Query: 61  IPSTEPIVKIPENPTTPEK 80
           I STEP   I E PT  +K
Sbjct: 199 IXSTEP--TIVEPPTLEQK 215

[Close]

BLAST of Moc06g18870 vs. ExPASy TrEMBL
Match: A0A6J1DPM2 (uncharacterized protein LOC111022366 OS=Momordica charantia OX=3673 GN=LOC111022366 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.0e-18
Identity = 60/123 (48.78%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRN E Q+GQLAN+LK RPQGS PGHTE+PKR GKEQCKA+TLRSGL+Y+GP M   +V+
Sbjct: 1   MRNLERQVGQLANDLKARPQGSIPGHTEVPKRYGKEQCKAVTLRSGLSYEGPKM-LVEVK 60

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQVREVVQHIYNMRASLDFAVLPSWPP 120
            PST     I   P+  +KE T  G  +     PQ +              FA +P +P 
Sbjct: 61  KPST----SIQNAPSEAKKEKTTSGEGEASGSSPQKKS------------SFAPIPPFPQ 106

Query: 121 ALA 124
            LA
Sbjct: 121 RLA 106

[Close]

BLAST of Moc06g18870 vs. ExPASy TrEMBL
Match: A0A6J1DTH7 (uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022971 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18
Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 1   MRNFETQLGQLANELKNRPQGSFPGHTELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQ 60
           MRN E Q+GQL+N+LK RPQGSFP HTE+PKR+GKEQCKA+TLRSGL+Y+ P MP  +V+
Sbjct: 1   MRNLEVQIGQLSNDLKARPQGSFPWHTEVPKRDGKEQCKAVTLRSGLSYERPKMP-VEVE 60

Query: 61  IPSTEPIVKIPENPTTPEKENTRKGNEDTPSVPPQVREVVQHIYNMRASLDFAVLPSWPP 120
            PST     I  +P+  EKE T  G  +      Q             +  F ++P +P 
Sbjct: 61  KPST----SIQNSPSEAEKEKTTSGEGEASGASSQ------------ENSSFLLIPPFPQ 106

Query: 121 ALA 124
            LA
Sbjct: 121 ILA 106

The following BLAST results are available for this feature:

BLAST of Moc06g18870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159345.1	1.6e-41	89.80	uncharacterized protein LOC111025764 [Momordica charantia]	[more]
XP_022158408.1	1.0e-40	89.47	uncharacterized protein LOC111024897, partial [Momordica charantia]	[more]
XP_022158979.1	7.4e-23	77.22	uncharacterized protein LOC111025424 [Momordica charantia]	[more]
XP_022155224.1	4.2e-18	48.78	uncharacterized protein LOC111022366 [Momordica charantia]	[more]
XP_022155996.1	5.5e-18	47.15	uncharacterized protein LOC111022971 [Momordica charantia]	[more]

BLAST of Moc06g18870 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g18870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYG0	7.7e-42	89.80	uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DW02	5.0e-41	89.47	uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1E110	2.1e-23	78.48	uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DPM2	2.0e-18	48.78	uncharacterized protein LOC111022366 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DTH7	2.7e-18	47.15	uncharacterized protein LOC111022971 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Moc06g18870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g18870.1	Moc06g18870.1	mRNA