Moc06g18770 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g18770
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr6: 14620069 .. 14626029 (-)
RNA-Seq Expression	Moc06g18770
Synteny	Moc06g18770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGGGCTCCTTAATGCGAGAATACGTTCTCAACCTGATGGTCTACTTCAACGTGGCAGAGTCGAACGGGGCCATCATAGACGAGCAGAGTCAGGTCAGCTTCATTCTAGAATCTCTTCTGAAGAGTTTCCTACCATTCCACAGCAATGCGGTTATGAATAAGCTAGAGTACATTCTTACCGTGCTCTTAAACGAGCTACAGACCTACCATTCTCTTATGAAAAATAAGGGACAGGAAGGGGAGGCAAACATTGTCACCTAAAAAAGGTTCCACCGAAGTTCGACCTCTGGAACCAAGTCTGCAACCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGTTTCAAGAAGAAGAAGACTACTGGTAACGGGTCTAAACCTGACTCCACTGCTGCCACTACCAAGAAAGGCAAGGTCAAGGCTGCAGACAAAGGAAAATGTTTCCACTGCAATGTAGACAGACATTGGAAGCGCAATTGCCTGAAGTACTTGGTCGAGAAGAAGAAATCCAACGAAGGTAAATATGATTTACTTGTTTTAGAAACATGTTTAATAGAGAATGATGACTCTGTCTGGATATTAGATAAAGGAGCCACTAATCACGTTTGTTCTTCGTTTCAGGGAATTAGTTCATGGAGGCAGCTTGAAGTCGGAGAGATGACCCTCAAGGTCGGAATGGGAGAGGTCGTCTCAGCTTTTGCGGTAGGGGAGCTCAAGTTATTTACGAACAAGAATTTGTATATATTATTAGATCATGTGTACGTAGTTCCAAAAATTAAAAGGAACTTAATTTCAATTTTTTGCTTGTTAGAACATATGTATTCCATTTCATTTAATTTGAATGAAGCATTCATTTCTAGAAATCATGTGAATATTTGTTCTGGTAAACTTGAAAACAACTTGTATGTGCTAAGAGTCTTAGTTCAAAATGTCGATGTCGTTGAAAATGCCGAGGTCCCTATTTTACGGACATGTCAATGTTGGGAGGGAACTGATGTGGATTTATGAAGGCGAATATGGGAGAACTAATGTTCGGAGGATTGTAGGAAAACGAAGGTATTAAAATGAATCGAATCCTATCAAATCTTTATGACATGTGGATGTCGATGGATATTTCGGGAAAAAATAATGAAAATTGTGGAAATTGATGGAAATTTTTTAAATTAGCAAATAAAACTTGAATTGTAGCTTAATCAGCCTATAATTGATCACCTTTAACCATTAAAGATAAGAATATGACCATTTTACTTATGAAAATGTCGATGTCGATGGAAATATCGAAAAAATATTTTTTTCTTTAATGAAGATTAATGGAAATTATTTGAATATGTAAAGTAAACTTTAATTGTAAACTTTTGACTACTTCTTTAGTGTTTTTCATAGTAGATTCATTTGGAAATGAGATAACTACCGACTTGGTTTCCAAACACATTTCTAAATTCTAATTAACTCGTACCTGTTTACTTTTTACCTACTTCTCTTTTCAAATTTGAATTTACACATTTTTCAAACACATTTTCAAATCAATTATCAATCCAATCATCCAAAATATCTACCAATGAGATCTATATGTGCTTAATATTCTACTCATTTAAGCAACTACTTTCAAAACTTTCAGTCTATGATGACCGGGGAGAACTATTGTAATTTATATCGTTATCAAGATAGTGCACTAGATCCTCTGAGATCATCTTTTTGGTATTAATTAAGTTACCTATTTTACTTCATGTTTCACCACTATTTGTATATAATAATATTTTAGTTTTTAAAAACTCTAAGATTATATCAATCTTTATATATGTCAATATTTCACATATATTGTTCAATTGTGGAAGTAAGGACTAGATTGGATTAGAAATTATCAATAAAGCGAATTCCAAATATTATTAATTATACTTTATACAGTATTAAAATTTGAATGTTTCATTGAATAAACTAAGATTACAATCATTGAGGTTGTGAGGAATTATAGACTGTAGTGGCATAGTAAGAAGATGATGAAAATAAAATAACCTTAAATAAGAAGAGGGAAAAAAAAGACATGTCGACATTTGAGTCGACATGGAGGAGGGAAAATCGACTTTCCCCCCTATGTCGATGTCGACATGCTCGACACATCGACATGTCCACACGTCGACATATCCAACGATATGTCGACATGTCTCTCGACATTTTGAACTCTGGCTAAGACTAACCATTACTAAAGCAGTTTTAAATACTAATTTTAAAAATGTTAAAACTCAAACAAAAAGGAAAAAAGTTTCTCCTAAAGAAAATACCTATCGTTGACACTTAAAATTAGGTCACATTAATCTCAATAAAATTTGAGAGGTTGGTTAGGAATGGTCTTCTAAGCGAGTTAGAAGACGATTCTTTACCACCACGTGAATCTTGTCTTGAAGGCAAGATGACTAAAAGACCTTTTACTGGAAAATGTTATAGAGCCAAAGAGCCCTTAGAACTTATACATTCAGACCTTTATGGTCCGATAAATGTTAAAGCTCGAGAAGGGTATGAATACTTCACCTCTTTTATAGATGATTATTCAAGGTATGGTTATCTATACCTAATGCAACACAAGTCCAAAGCCCTTGAAAAGTTCAAGGAGTACAAGACTGAAGTTGAAAATCAATTAGGTAAAACCATTGAAACATTTCGATCTGATCGGGGTGGAGAGTATATGGACTTTAGATTCTAGGACTATATGATAGAACATGGAATCACATTCCAACTCTTAGCCCCTGGTACACCTCAACAGAACTGTGTATCAGAAAGGAGAAACAGAACTCTGTTCTATATGGTTTGTTCAATTATGAGCTATGCTCAGTTGCCTAACTCGTTTTGGGGTTACGCAGTGGAGACTGCGATTTATATTTTGAACTTAATTTTCATCGAAAAGTGTCTCTGAAACACTATTTCAGCTATAGAAAGGTCGTAAAGCTAGTTTATGTCACTTTCGCATTTGGGGATGTCTGAGACACGTGCTCGTGACTAACCCAAAGAAACTGGAGCTTCGTTCAAAAGTATGTCTATTCGTAGGTTACACTAAAAAGACGAGAGGTGGTCTCTTCTTCGATTCTCAAGAAAACAGAATGTATGTATCGACAAATGCCACCTTCTTGGAAGAAGACCACGTTCAAGATGATAAACTACGAAGTAAGGTAGTGATAAACCAAATTTCTTAAGAAGCTACAAACATATCGACAAGAGTTATTGATCAAACTAGCACTTCAATAAGAGTTTTTGATGAAGCATGTACATCACGTCAGTCACATCTACCTCAAGAATTGAGGGTGCCTCGACGTAGTGGGAGGATCGTGTCACAACCTGACCACGACATGGATTTAATTGAAACTTAAGTTGTCATACCCGATGACAGCGTCGAGGATCCATTAACCTACAAACAGGCAATGGAAGATGCTGATAAGGACAAATGTGTCACAGCCATTGACCTGGAAATGAAGTCTATGTACTTCAATTCCGTTTGGGAACTTGTAGATCAACCTGACGGGGTAAAACTCATAGGGTGCAAATGGATCTATAAGAGAAAACGAGACCACGAAAGAAAGGTGCAGACCTACAAGGCGAGACTTGTGGCGAAAGACTACACACAAAAGACTTTGAAGAAACCTTCTCCCCTGTAGCTATGCTTAAGTTCATAAGAATACTCTTGTCTATTGCGATCAAATCTTATGGTTTTGACCAAAATGTTGATGAGCCTTGTGTATACAAGAAGATTGTCAACAACACTGTAGTCTTCTTAGTGTGTATATGGATGATATCTTACTCATTGGGAATGATGTAGGTATCTTACTAACATAAAGAAGTGGCTAGCTATTGAGTTCCAAATGAAGGATTTGGGAGAAGCTCAGTATGTTCTTGACATCCAAATTCTTAGGGATCGTAAGAACAAAACGCTAGCCCTGTCTCAAACAACTTATATGGACAAGATGTTTGTTCGATATTCAATGCTGAATTCCAGGAAGGACTTATTTCCTTTCAGGCATGGAATTCATCTGTGTAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGGATACCCTATGCTTCAATAGTGGGTAGCCTGATGTATGCTATGATGTGCACTAGACCTGACATTTGCTACGCAGTAGAGATGGTCAGTAGATATCAATCTAACCAAGGATATGATCACTAGATTGATGTTAACGGAATCTTCGAGTATCTCAGGAGAACAAGGGATTATAAGCTCGTGCATGGCTCTAAGGATTTGATCATTACAGGATACACTAACTCTGACTTTGAAATAGACAAGGATTCAAGCAAATCCACGTCATGGTCAGTATTCACTCTTAACGGAGGAGCGGTAGTTTGCGAAGCATTAAACAAGGATGCATCGCATACTCCACGATGGAGGTTGAGTACGTTGCAGCTTGTGAAGCGGCAAAAGAGGTGATTTGGCTTAGGAAATTCTTGACCGATTTGGAAGTTGTTCCAAACATGAACTTGTCCATCACACTTTATTGTAATAACAGTGGTACTGTGACAAATTCTAAAGAACCTTGAAGCCACAAGAAAGACAAGCACATAGAAAGGAAGTACCACCTAATACGGGAGATAGTGCAACGGGGGTATGTAATCGTCACAAAGATCGCTTCAGAGTACAATATTGCTGATCCTTTTACGAAGGCACCCACGGTTACATTGTTTGAGGGTCATCTAGAAAGTCTAGGTTTACGAGCATTGTACGGTTAGTTTAGGACAAGTGGGAGAACTGTAATGGGTATAGTGTATGCCCTAGTTTATTGTATTTTTCCTTTGCTTTATGATTATGTACACCCCACTAGAGTTTAGTTCAAGTGGGAGTTTGTTGGGTGTGTTGCCTTAAATTCGTAGTTTGTATTTATGTAAAAACAAATTTATATTCAATAAAGTTATATTCAATCAATTTGTTGTTGAATTCATAACATTTCATTGTCTAAATCCAATAAACTAAACATCCAAAGTTACTGTCATGTAACCGGGACAGTATATATACTGGGTTCTATTCCAACTTCTTCACAGAAGAAATTAAACCTTTGTGATGTATATTCAGTCTCATTGTCAGTCATCACCACCTGAATCTTACAGCCACTTTGATTCTCAACCCATCTTTTAAACTTTAGAAATACTCTAGCTGCATCAGATTTATGCTTCATGAAATATATCCAACACATTCGAGTATAATCATCAATAAAGATAATGAAATACCTATTATCATTCAGTGAGAGAGTTGGTAAAGATCCACACAAGTCAGTGTGGATGAGCTACAACTTCTCGGTTGCTTTCCAAACCGACTTCTTAAATGGCAATCTTGTTTGCTTCCCTATCAAACAAGCTCTGCAGTTTGTTTTCAGCTCCTCCTGAACTGGTACTCCTATTTCCATCTCATTTTTCTGTAGGTATTACAACCCCTTCTAATGAAAATGCCCCAACCTCCTGTGCCATAACTCAGTGTCATTCACTTGATACCTGAAAGTTACCTGCTCCTTCTCGAATGGATCTAGTGAGAAGTTCTTGTTCCGCATTTTTATTTTGAACAACTCATTCCTATTAGAATCATAAATGAGGCACCTTCCTTCTGCAAATAATATTTTAAACTCATTCTCTACTAGTTGACCAACACTTAACAAGTTTTGATCAATTTCAAAAATAAACAATACTTCAGTAATCAACTTGGTTCCAGCACAGCTCTCTATTGACGCTTTGCCCTTTTCCTTCACTTCTAGATATGAAGGGATGTGATTTCCGAAGCGGAAGCGGATCTTCGTTGCTGATTTTCGGGATACAAAATCGAATTACAAAGAAGAAAAATACAGAAGAAACTCAAACCTTTGAAGAACGTTACTTCAGTGAGTTCCCCTCGAACACCACCACCGGATCTTCCTCGCTATCCTCTTGGGTCTCGGGATCGTGCTTGTGGTAG

mRNA sequence

ATGAAGGAGGGCTCCTTAATGCGAGAATACGTTCTCAACCTGATGGTCTACTTCAACGTGGCAGAGTCGAACGGGGCCATCATAGACGAGCAGAGTCAGGGGAGGCAAACATTGTCACCTAAAAAAGGTTCCACCGAAGTTCGACCTCTGGAACCAAGTCTGCAACCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGTTTCAAGAAGAAGAAGACTACTGGTAACGGGTCTAAACCTGACTCCACTGCTGCCACTACCAAGAAAGGCAAGGTCAAGGCTGCAGACAAAGGAAAATGTTTCCACTGCAATGTAGACAGACATTGGAAGCGCAATTGCCTGAAGTACTTGGTCGAGAAGAAGAAATCCAACGAAGGTAAATATGATTTACTTGTTTTAGAAACATGTTTAATAGAGAATGATGACTCTGTCTGGATATTAGATAAAGGAGCCACTAATCACGTTTGTTCTTCGTTTCAGGGAATTAGTTCATGGAGGCAGCTTGAAGTCGGAGAGATGACCCTCAAGGTCGGAATGGGAGAGGTCGTCTCAGCTTTTGCGTTCAAAATGTCGATGTCGTTGAAAATGCCGAGGTCCCTATTTTACGGACATGTCAATGTTGGGAGGGAACTGATGTGGATTTATGAAGGCGAATATGGGAGAACTAATGTTCGGAGGATTGTAGGAAAACGAAGCGTCGAGGATCCATTAACCTACAAACAGGCAATGGAAGATGCTGATAAGGACAAATGTGTCACAGCCATTGACCTGGAAATGAAGTCTATCTCTCTATTGACGCTTTGCCCTTTTCCTTCACTTCTAGATATGAAGGGATGTGATTTCCGAAGCGGAAGCGGATCTTCGTTGCTGATTTTCGGGATACAAAATCGAATTACAAAGAAGAAAAATACAGAAGAAACTCAAACCTTTGAAGAACGTTACTTCAGTGAGTTCCCCTCGAACACCACCACCGGATCTTCCTCGCTATCCTCTTGGGTCTCGGGATCGTGCTTGTGGTAG

Coding sequence (CDS)

ATGAAGGAGGGCTCCTTAATGCGAGAATACGTTCTCAACCTGATGGTCTACTTCAACGTGGCAGAGTCGAACGGGGCCATCATAGACGAGCAGAGTCAGGGGAGGCAAACATTGTCACCTAAAAAAGGTTCCACCGAAGTTCGACCTCTGGAACCAAGTCTGCAACCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGTTTCAAGAAGAAGAAGACTACTGGTAACGGGTCTAAACCTGACTCCACTGCTGCCACTACCAAGAAAGGCAAGGTCAAGGCTGCAGACAAAGGAAAATGTTTCCACTGCAATGTAGACAGACATTGGAAGCGCAATTGCCTGAAGTACTTGGTCGAGAAGAAGAAATCCAACGAAGGTAAATATGATTTACTTGTTTTAGAAACATGTTTAATAGAGAATGATGACTCTGTCTGGATATTAGATAAAGGAGCCACTAATCACGTTTGTTCTTCGTTTCAGGGAATTAGTTCATGGAGGCAGCTTGAAGTCGGAGAGATGACCCTCAAGGTCGGAATGGGAGAGGTCGTCTCAGCTTTTGCGTTCAAAATGTCGATGTCGTTGAAAATGCCGAGGTCCCTATTTTACGGACATGTCAATGTTGGGAGGGAACTGATGTGGATTTATGAAGGCGAATATGGGAGAACTAATGTTCGGAGGATTGTAGGAAAACGAAGCGTCGAGGATCCATTAACCTACAAACAGGCAATGGAAGATGCTGATAAGGACAAATGTGTCACAGCCATTGACCTGGAAATGAAGTCTATCTCTCTATTGACGCTTTGCCCTTTTCCTTCACTTCTAGATATGAAGGGATGTGATTTCCGAAGCGGAAGCGGATCTTCGTTGCTGATTTTCGGGATACAAAATCGAATTACAAAGAAGAAAAATACAGAAGAAACTCAAACCTTTGAAGAACGTTACTTCAGTGAGTTCCCCTCGAACACCACCACCGGATCTTCCTCGCTATCCTCTTGGGTCTCGGGATCGTGCTTGTGGTAG

Protein sequence

MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGRQTLSPKKGSTEVRPLEPSLQPLLLEVRLSRRSFKKKKTTGNGSKPDSTAATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLETCLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFAFKMSMSLKMPRSLFYGHVNVGRELMWIYEGEYGRTNVRRIVGKRSVEDPLTYKQAMEDADKDKCVTAIDLEMKSISLLTLCPFPSLLDMKGCDFRSGSGSSLLIFGIQNRITKKKNTEETQTFEERYFSEFPSNTTTGSSSLSSWVSGSCLW

Homology

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BLAST of Moc06g18770 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 121 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 180

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 181 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 240

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 241 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 349

[Close]

BLAST of Moc06g18770 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 122 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 181

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 182 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 241

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 242 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 301

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 302 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 350

[Close]

BLAST of Moc06g18770 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 122 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 181

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 182 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 241

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 242 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 301

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 302 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 350

[Close]

BLAST of Moc06g18770 vs. NCBI nr
Match: KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 239 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 298

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 299 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 358

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 359 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 418

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 419 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 467

[Close]

BLAST of Moc06g18770 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 122 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 181

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 182 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 241

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 242 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 301

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 302 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 350

[Close]

BLAST of Moc06g18770 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 122 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 181

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 182 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 241

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 242 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 301

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 302 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 350

[Close]

BLAST of Moc06g18770 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 239 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 298

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 299 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 358

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 359 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 418

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 419 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 467

[Close]

BLAST of Moc06g18770 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 122 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 181

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 182 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 241

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 242 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 301

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 302 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 350

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BLAST of Moc06g18770 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 121 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 180

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 181 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 240

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 241 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 349

[Close]

BLAST of Moc06g18770 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46
Identity = 115/232 (49.57%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 1   MKEGSLMREYVLNLMVYFNVAESNGAIIDEQSQGR-------QTLSPKKGSTEVRPLEPS 60
           M EG+ +RE+VLN+MV+FNVAE NGA+IDE SQ         ++    + +  +  +  +
Sbjct: 122 MNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYT 181

Query: 61  LQPLLLE------------------VRLSRRSFKKKKTTGNGSKPDST------------ 120
           L  LL E                  V  S R F +  T+G  S P S+            
Sbjct: 182 LTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQ 241

Query: 121 --------AATTKKGKVKAADKGKCFHCNVDRHWKRNCLKYLVEKKKSNEGKYDLLVLET 180
                   A TTKK K   A KG CFHCN + HWKRNC KYL EKKK+ +GKYDLLVLET
Sbjct: 242 GNKANLAAAKTTKKAK---AAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 301

Query: 181 CLIENDDSVWILDKGATNHVCSSFQGISSWRQLEVGEMTLKVGMGEVVSAFA 188
           CL+ENDDS WI+D GATNHVCSSFQGISSWRQLE GEMT++VG G VVSA A
Sbjct: 302 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIA 350

The following BLAST results are available for this feature:

BLAST of Moc06g18770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048404.1	3.9e-46	49.57	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	3.9e-46	49.57	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0047792.1	3.9e-46	49.57	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0062993.1	3.9e-46	49.57	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0031826.1	3.9e-46	49.57	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]

BLAST of Moc06g18770 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g18770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	1.9e-46	49.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5A7V4M1	1.9e-46	49.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5A7TWB9	1.9e-46	49.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5A7TZD7	1.9e-46	49.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7UGV2	1.9e-46	49.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269...	[more]

BLAST of Moc06g18770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g18770.1	Moc06g18770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0005488	binding