Moc06g18500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g18500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr6: 14456546 .. 14457091 (+)
RNA-Seq Expression	Moc06g18500
Synteny	Moc06g18500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACGCTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATTGCTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACGTTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTTAGGTCTTGGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACAGGCCAGGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTTGAACACAAGGCAGGAAAGTCCAACCAAGTTGCCGACGCTCTTAGCCGTAAAGGAGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGCGGACGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCCTCCACCCGAACTGTGGTCGAGCTGGCCAAAACCGGGAAGACCCGCCAGTTCTAG

mRNA sequence

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACGCTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATTGCTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACGTTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTTAGGTCTTGGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACAGGCCAGGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTTGAACACAAGGCAGGAAAGTCCAACCAAGTTGCCGACGCTCTTAGCCGTAAAGGAGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGCGGACGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCCTCCACCCGAACTGTGGTCGAGCTGGCCAAAACCGGGAAGACCCGCCAGTTCTAG

Coding sequence (CDS)

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCGTTTGAAGTAGAAACGGATGCTTCAGACTACGCTTTAGGTGGTGTCCTTCTCCAAGACGGTCACCCGATTGCTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACGTTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTTAGGTCTTGGAGGCAGTACTTGTTGGGCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACAGGCCAGGTGGCAGGAATTGTTAGCCGAGTTTGATTTTAAGTTTGAACACAAGGCAGGAAAGTCCAACCAAGTTGCCGACGCTCTTAGCCGTAAAGGAGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGCGGACGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCCTCCACCCGAACTGTGGTCGAGCTGGCCAAAACCGGGAAGACCCGCCAGTTCTAG

Protein sequence

MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQF

Homology

[Close]

BLAST of Moc06g18500 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 345.1 bits (884), Expect = 3.6e-91
Identity = 171/181 (94.48%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            MMKGPVLGLADVTKPFEVETDASDYALGGVLLQD HPI YESRKLNNAERRYTVSEKEML
Sbjct: 936  MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDDHPIXYESRKLNNAERRYTVSEKEML 995

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
            AVVHCLRSWRQYLLGS FVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK
Sbjct: 996  AVVHCLRSWRQYLLGSXFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 1055

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHA LCMLAHIHTSKADGSIRDLI EYLQ  PS RTVVELAKT KTRQ
Sbjct: 1056 SNQAADALSRKGEHAXLCMLAHIHTSKADGSIRDLIXEYLQXXPSARTVVELAKTXKTRQ 1115

Query: 181  F 182
            F
Sbjct: 1116 F 1116

[Close]

BLAST of Moc06g18500 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 155/181 (85.64%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            M +GPVLGL DVTKPFEVETDASD+ALGGVL+Q+GHPIAYESRKLN+AERRYTVSEKEML
Sbjct: 942  MTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEGHPIAYESRKLNDAERRYTVSEKEML 1001

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
            AVVHCLR WRQYLLGS FVVKTDNSA CHFF+QPKLT+KQARWQE LAEFDFKFEHKAGK
Sbjct: 1002 AVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQARWQESLAEFDFKFEHKAGK 1061

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHAALCMLAHIH+SK DGS+RD+I+E+L +DPS + VVELAK GKTRQ
Sbjct: 1062 SNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQ 1121

Query: 181  F 182
            F
Sbjct: 1122 F 1122

[Close]

BLAST of Moc06g18500 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 155/181 (85.64%), Postives = 169/181 (93.37%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            M +GPVLGL DVTKPFEVETDASD+ALGGVL+Q+GHPIAYESRKLN+AERRYTVSEKEML
Sbjct: 942  MTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEGHPIAYESRKLNDAERRYTVSEKEML 1001

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
            AVVHCLR WRQYLLGS FVVKTDNSA CHFF+QPKLT+KQARWQE LAEFDFKFEHKAGK
Sbjct: 1002 AVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQARWQESLAEFDFKFEHKAGK 1061

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHAALCMLAHIH+SK DGS+RD+I+E+L +DPS + VVELAK GKTRQ
Sbjct: 1062 SNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKVVVELAKAGKTRQ 1121

Query: 181  F 182
            F
Sbjct: 1122 F 1122

[Close]

BLAST of Moc06g18500 vs. NCBI nr
Match: XP_022975516.1 (uncharacterized protein LOC111474945, partial [Cucurbita maxima])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 153/181 (84.53%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            M +GPVLGL DVTKPFE+ETDASD+ALGGVL+Q+GHPIA+ESRKLN+AERRYTVSEKEML
Sbjct: 838  MTRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDAERRYTVSEKEML 897

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
            AVVHCLR WRQYLLGS FVVKTDNSAICHFF+QPKLT+KQARWQ+ LAEFDFKFEHKAGK
Sbjct: 898  AVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQDSLAEFDFKFEHKAGK 957

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHAALCMLAHIH+SK DGS+RD+I+E+L +DPS + VVELAK GKTRQ
Sbjct: 958  SNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQ 1017

Query: 181  F 182
            F
Sbjct: 1018 F 1018

[Close]

BLAST of Moc06g18500 vs. NCBI nr
Match: XP_022975176.1 (uncharacterized protein LOC111474215 [Cucurbita maxima])

HSP 1 Score: 308.1 bits (788), Expect = 4.9e-80
Identity = 147/181 (81.22%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            MM GPVLGL DVTKPFE+ETDASD+ALGGVL+Q+GHPIA+ESRKLN+AERRY VSEK+ML
Sbjct: 839  MMWGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDAERRYIVSEKKML 898

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
             VVHCLR WRQYLLGS FVVKTDNS ICHFF+QPKLT+KQARWQE LA+FDFKF+HKAGK
Sbjct: 899  TVVHCLRVWRQYLLGSQFVVKTDNSVICHFFDQPKLTAKQARWQESLAKFDFKFKHKAGK 958

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHAALCMLAHIH+SK DGS+RD+I+E+L +D S + VVELAK  KTRQ
Sbjct: 959  SNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDLSAKAVVELAKARKTRQ 1018

Query: 181  F 182
            F
Sbjct: 1019 F 1019

[Close]

BLAST of Moc06g18500 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.5e-27
Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 5   PVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEMLAVVH 64
           P+L + D TK F + TDASD ALG VL QDGHP++Y SR LN  E  Y+  EKE+LA+V 
Sbjct: 498 PILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVW 557

Query: 65  CLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGKSNQV 124
             +++R YLLG +F + +D+  +   +      SK  RW+  L+EFDF  ++  GK N V
Sbjct: 558 ATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCV 617

Query: 125 ADALSR 131
           ADALSR
Sbjct: 618 ADALSR 623

[Close]

BLAST of Moc06g18500 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.7e-25
Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
           +++ P+L L D  K F + TDAS+ ALG VL Q+GHPI++ SR LN+ E  Y+  EKE+L
Sbjct: 493 IIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELL 552

Query: 61  AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
           A+V   +++R YLLG  F++ +D+  +    N  +  +K  RW+  L+E+ FK ++  GK
Sbjct: 553 AIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGK 612

Query: 121 SNQVADALSR 131
            N VADALSR
Sbjct: 613 ENSVADALSR 622

[Close]

BLAST of Moc06g18500 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 55/130 (42.31%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 6   VLGLADVTKPFEVETDASDYALGGVLLQD----GHPIAYESRKLNNAERRYTVSEKEMLA 65
           +L     TKPF + TDAS++A+G VL QD      PIAY SR LN  E  Y   EKEMLA
Sbjct: 425 ILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLA 484

Query: 66  VVHCLRSWRQYLLGSYFV-VKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 125
           ++  L + R YL G+  + V TD+  +          +K  RW+  + E++ +  +K GK
Sbjct: 485 IIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGK 544

Query: 126 SNQVADALSR 131
           SN VADALSR
Sbjct: 545 SNVVADALSR 554

[Close]

BLAST of Moc06g18500 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-19
Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDG-----HPIAYESRKLNNAERRYTVS 60
           ++  PVL   D +K   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+VS
Sbjct: 693 LVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVS 752

Query: 61  EKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFNQPKLTSKQ-ARWQELLAEFD 120
           +KEMLA++  L+ WR YL  +   F + TD+ + I    N+ +  +K+ ARWQ  L +F+
Sbjct: 753 DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFN 812

Query: 121 FKFEHKAGKSNQVADALSR 131
           F+  ++ G +N +ADALSR
Sbjct: 813 FEINYRPGSANHIADALSR 831

[Close]

BLAST of Moc06g18500 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-19
Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDG-----HPIAYESRKLNNAERRYTVS 60
           ++  PVL   D +K   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+VS
Sbjct: 693 LVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVS 752

Query: 61  EKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFNQPKLTSKQ-ARWQELLAEFD 120
           +KEMLA++  L+ WR YL  +   F + TD+ + I    N+ +  +K+ ARWQ  L +F+
Sbjct: 753 DKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFN 812

Query: 121 FKFEHKAGKSNQVADALSR 131
           F+  ++ G +N +ADALSR
Sbjct: 813 FEINYRPGSANHIADALSR 831

[Close]

BLAST of Moc06g18500 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.7e-91
Identity = 171/181 (94.48%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            MMKGPVLGLADVTKPFEVETDASDYALGGVLLQD HPI YESRKLNNAERRYTVSEKEML
Sbjct: 936  MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDDHPIXYESRKLNNAERRYTVSEKEML 995

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
            AVVHCLRSWRQYLLGS FVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK
Sbjct: 996  AVVHCLRSWRQYLLGSXFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 1055

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHA LCMLAHIHTSKADGSIRDLI EYLQ  PS RTVVELAKT KTRQ
Sbjct: 1056 SNQAADALSRKGEHAXLCMLAHIHTSKADGSIRDLIXEYLQXXPSARTVVELAKTXKTRQ 1115

Query: 181  F 182
            F
Sbjct: 1116 F 1116

[Close]

BLAST of Moc06g18500 vs. ExPASy TrEMBL
Match: A0A6J1IEF9 (uncharacterized protein LOC111474945 OS=Cucurbita maxima OX=3661 GN=LOC111474945 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.4e-85
Identity = 153/181 (84.53%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            M +GPVLGL DVTKPFE+ETDASD+ALGGVL+Q+GHPIA+ESRKLN+AERRYTVSEKEML
Sbjct: 838  MTRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDAERRYTVSEKEML 897

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
            AVVHCLR WRQYLLGS FVVKTDNSAICHFF+QPKLT+KQARWQ+ LAEFDFKFEHKAGK
Sbjct: 898  AVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQDSLAEFDFKFEHKAGK 957

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHAALCMLAHIH+SK DGS+RD+I+E+L +DPS + VVELAK GKTRQ
Sbjct: 958  SNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQ 1017

Query: 181  F 182
            F
Sbjct: 1018 F 1018

[Close]

BLAST of Moc06g18500 vs. ExPASy TrEMBL
Match: A0A6J1IDF7 (uncharacterized protein LOC111474215 OS=Cucurbita maxima OX=3661 GN=LOC111474215 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.4e-80
Identity = 147/181 (81.22%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            MM GPVLGL DVTKPFE+ETDASD+ALGGVL+Q+GHPIA+ESRKLN+AERRY VSEK+ML
Sbjct: 839  MMWGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDAERRYIVSEKKML 898

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
             VVHCLR WRQYLLGS FVVKTDNS ICHFF+QPKLT+KQARWQE LA+FDFKF+HKAGK
Sbjct: 899  TVVHCLRVWRQYLLGSQFVVKTDNSVICHFFDQPKLTAKQARWQESLAKFDFKFKHKAGK 958

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRKGEHAALCMLAHIH+SK DGS+RD+I+E+L +D S + VVELAK  KTRQ
Sbjct: 959  SNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDLSAKAVVELAKARKTRQ 1018

Query: 181  F 182
            F
Sbjct: 1019 F 1019

[Close]

BLAST of Moc06g18500 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.6e-79
Identity = 145/181 (80.11%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1    MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
            +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPIAYESRKLN AERRYTVSEKEML
Sbjct: 947  LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 1006

Query: 61   AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
            AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQARWQE LAEFDF+FEHK G 
Sbjct: 1007 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 1066

Query: 121  SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
            SNQ ADALSRK EHAA+C+LAH+  S+  GSIRD +RE+LQ+D + + V+ LAK GKTRQ
Sbjct: 1067 SNQAADALSRKQEHAAICLLAHLQGSEIGGSIRDTLREFLQKDHAAQNVMNLAKAGKTRQ 1126

Query: 181  F 182
            F
Sbjct: 1127 F 1127

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BLAST of Moc06g18500 vs. ExPASy TrEMBL
Match: A0A5A7UY33 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00110 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.6e-79
Identity = 144/181 (79.56%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MMKGPVLGLADVTKPFEVETDASDYALGGVLLQDGHPIAYESRKLNNAERRYTVSEKEML 60
           +M+GP+LG+ADVTKPFEVETDASDYALGGVLLQ+GHPIAYESRKLN AERRYTVSEKEML
Sbjct: 742 LMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEML 801

Query: 61  AVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFDFKFEHKAGK 120
           AVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQARWQE LAEFDF+FEHK G 
Sbjct: 802 AVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGS 861

Query: 121 SNQVADALSRKGEHAALCMLAHIHTSKADGSIRDLIREYLQRDPSTRTVVELAKTGKTRQ 180
           SNQ ADALSRK EHAA+C+LAH+  S+  GS+RD +RE+LQ+D + + V+ LAK GKTRQ
Sbjct: 862 SNQAADALSRKQEHAAICLLAHLQESEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKTRQ 921

Query: 181 F 182
           F
Sbjct: 922 F 922

The following BLAST results are available for this feature:

BLAST of Moc06g18500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150099.1	3.6e-91	94.48	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
XP_023537907.1	5.0e-85	85.64	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]
XP_023524533.1	5.0e-85	85.64	uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]	[more]
XP_022975516.1	1.1e-84	84.53	uncharacterized protein LOC111474945, partial [Cucurbita maxima]	[more]
XP_022975176.1	4.9e-80	81.22	uncharacterized protein LOC111474215 [Cucurbita maxima]	[more]

BLAST of Moc06g18500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	6.5e-27	47.62	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	4.7e-25	43.85	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	2.2e-19	42.31	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q9UR07	3.8e-19	39.57	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.8e-19	39.57	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Moc06g18500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D906	1.7e-91	94.48	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A6J1IEF9	5.4e-85	84.53	uncharacterized protein LOC111474945 OS=Cucurbita maxima OX=3661 GN=LOC111474945...	[more]
A0A6J1IDF7	2.4e-80	81.22	uncharacterized protein LOC111474215 OS=Cucurbita maxima OX=3661 GN=LOC111474215...	[more]
A0A5A7T0E2	7.6e-79	80.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]
A0A5A7UY33	7.6e-79	79.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Moc06g18500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 11..82 e-value: 7.8E-10 score: 40.6
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 5..143
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 17..131 e-value: 1.7316E-62 score: 187.315
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 11..110 e-value: 4.7E-34 score: 116.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g18500.1	Moc06g18500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity