Moc06g18490 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g18490
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Location	chr6: 14454488 .. 14455590 (+)
RNA-Seq Expression	Moc06g18490
Synteny	Moc06g18490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCCTGGACTACGTGAAACAATTCTCTGCCGTGATGCTGGATATTCGCGACATGTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGGGCCAGAACCAAGCTGTATGAACAAAGGGTACAAGACCTTGCCACCGCCATGGCCGCTGCCGAAAGATTGCTAGACTATAACAGTGAACCATCCCACCCGAAAAAGAATGCTACAAACCCCACTGGGGGAAACAAGACGTTCAAACCCTTTACCCCAAAGAGTGGGGGAGCTGACAAGAGACCTCAAGGCCCGAATCCCGGTCCTTCCCGAGGACCCTATCCACAAAGTCAAAAATCTCAAAGGCTGATGTCATGCTTCTTGTGCAAAGGTCCCCACCGGGTAGCTGAATGCCCACACCGAGCTGCCCTTACTGCCCTTCAAGCATCCGTTCAGTCGTGCAATGAACCTGGAGTCGAAACGGATTATGAGAAGGAAAAAGACGAAGAAATACCTAGAATGGGGGCGTTAAAATTCCTATCTGCCATTCAAAAGAGGGTCAATGGACCCAAAGGAACGTCCGAAAAGGGGCTTATGTTCGTAGATGCTACGATCAATTGTAACCCTGCAAAGAGCACCATGGTGGATTCAGGTGCAACCCACAACTTCATGTCAGAACAGGAAGCCCGCCGACTGAAATTGACTATTGAGAAGGATACGGGTAAGATGAAGGCCGTCAACTCCGAAGCTCTACCCATTGTAGGAGTTTCTAAAAGAGTGATGTTGAAATTGGGGACGTGGACAGGCAGTGTCGATTTCGTAGTAGTTCGCATGGACGACTTCGACGTTGTACTGGGGATGGAGTTCCTCCTCGAACATAAGGTCATACCGATGCCTCTGGACAAGTGTATGATTGTCACTAGTAATAGTCCCACTGTGGTCACAGCTAGCATCAAACAACCTGGTGGCATAAGGATGATATCCGCATTACAGTTGAAGAAAGGCCTCAACCGGGAGGAACCTACCTTTATGGCCATTCCGATGGTCAAACAGCCGGTGGAGACAAGAGATGTCCCACCTGA

mRNA sequence

ATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCCTGGACTACGTGAAACAATTCTCTGCCGTGATGCTGGATATTCGCGACATGTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGGGCCAGAACCAAGCTGTATGAACAAAGGGTACAAGACCTTGCCACCGCCATGGCCGCTGCCGAAAGATTGCTAGACTATAACAGTGAACCATCCCACCCGAAAAAGAATGCTACAAACCCCACTGGGGGAAACAAGACGTTCAAACCCTTTACCCCAAAGAGTGGGGGAGCTGACAAGAGACCTCAAGGCCCGAATCCCGGTCCTTCCCGAGGACCCTATCCACAAAGTCAAAAATCTCAAAGGCTGATGTCATGCTTCTTGTGCAAAGGTCCCCACCGGGTAGCTGAATGCCCACACCGAGCTGCCCTTACTGCCCTTCAAGCATCCGTTCAGTCGTGCAATGAACCTGGAGTCGAAACGGATTATGAGAAGGAAAAAGACGAAGAAATACCTAGAATGGGGGCGTTAAAATTCCTATCTGCCATTCAAAAGAGGGTCAATGGACCCAAAGGAACGTCCGAAAAGGGGCTTATGTTCGTAGATGCTACGATCAATTGTAACCCTGCAAAGAGCACCATGGTGGATTCAGGTGCAACCCACAACTTCATGTCAGAACAGGAAGCCCGCCGACTGAAATTGACTATTGAGAAGGATACGGGTAAGATGAAGGCCGTCAACTCCGAAGCTCTACCCATTGTAGGAGTTTCTAAAAGAGTGATGTTGAAATTGGGGACGTGGACAGGCAGTGTCGATTTCGTAGTAGTTCGCATGGACGACTTCGACGTTGTACTGGGGATGGAGTTCCTCCTCGAACATAAGGTCATACCGATGCCTCTGGACAAGTTTGAAGAAAGGCCTCAACCGGGAGGAACCTACCTTTATGGCCATTCCGATGGTCAAACAGCCGGTGGAGACAAGAGATGTCCCACCTGA

Coding sequence (CDS)

ATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCCTGGACTACGTGAAACAATTCTCTGCCGTGATGCTGGATATTCGCGACATGTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGGGCCAGAACCAAGCTGTATGAACAAAGGGTACAAGACCTTGCCACCGCCATGGCCGCTGCCGAAAGATTGCTAGACTATAACAGTGAACCATCCCACCCGAAAAAGAATGCTACAAACCCCACTGGGGGAAACAAGACGTTCAAACCCTTTACCCCAAAGAGTGGGGGAGCTGACAAGAGACCTCAAGGCCCGAATCCCGGTCCTTCCCGAGGACCCTATCCACAAAGTCAAAAATCTCAAAGGCTGATGTCATGCTTCTTGTGCAAAGGTCCCCACCGGGTAGCTGAATGCCCACACCGAGCTGCCCTTACTGCCCTTCAAGCATCCGTTCAGTCGTGCAATGAACCTGGAGTCGAAACGGATTATGAGAAGGAAAAAGACGAAGAAATACCTAGAATGGGGGCGTTAAAATTCCTATCTGCCATTCAAAAGAGGGTCAATGGACCCAAAGGAACGTCCGAAAAGGGGCTTATGTTCGTAGATGCTACGATCAATTGTAACCCTGCAAAGAGCACCATGGTGGATTCAGGTGCAACCCACAACTTCATGTCAGAACAGGAAGCCCGCCGACTGAAATTGACTATTGAGAAGGATACGGGTAAGATGAAGGCCGTCAACTCCGAAGCTCTACCCATTGTAGGAGTTTCTAAAAGAGTGATGTTGAAATTGGGGACGTGGACAGGCAGTGTCGATTTCGTAGTAGTTCGCATGGACGACTTCGACGTTGTACTGGGGATGGAGTTCCTCCTCGAACATAAGGTCATACCGATGCCTCTGGACAAGTTTGAAGAAAGGCCTCAACCGGGAGGAACCTACCTTTATGGCCATTCCGATGGTCAAACAGCCGGTGGAGACAAGAGATGTCCCACCTGA

Protein sequence

MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGVETDYEKEKDEEIPRMGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFMSEQEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLLEHKVIPMPLDKFEERPQPGGTYLYGHSDGQTAGGDKRCPT

Homology

[Close]

BLAST of Moc06g18490 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 575.1 bits (1481), Expect = 4.0e-160
Identity = 291/309 (94.17%), Postives = 297/309 (96.12%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           MARRKLRELRHTGTI DYVKQFSAVM+DIRDMSEKDKVFVFI+GLK WARTKLYEQRVQD
Sbjct: 250 MARRKLRELRHTGTIRDYVKQFSAVMMDIRDMSEKDKVFVFIZGLKLWARTKLYEQRVQD 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP 120
           LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP
Sbjct: 310 LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP 369

Query: 121 YPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGVETDYEKEKDEEIPR 180
           YPQSQ +QRLMS FLCKGPHRVAECPHRAALTALQASVQSCNEP VETD EKE+DEE PR
Sbjct: 370 YPQSQNAQRLMSYFLCKGPHRVAECPHRAALTALQASVQSCNEPEVETDCEKEEDEETPR 429

Query: 181 MGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFMSEQEARRLK 240
           M ALKFLSAIQKRVNGPKGTSEKGLMFVDATINCN AKSTMVDSGATHNF+SEQEARRLK
Sbjct: 430 MRALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNXAKSTMVDSGATHNFISEQEARRLK 489

Query: 241 LTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLLEH 300
           LTIEKDTGKMK VN EALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFL+EH
Sbjct: 490 LTIEKDTGKMKVVNFEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEH 549

Query: 301 KVIPMPLDK 310
           KVIPMPL K
Sbjct: 550 KVIPMPLAK 558

[Close]

BLAST of Moc06g18490 vs. NCBI nr
Match: XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia])

HSP 1 Score: 560.8 bits (1444), Expect = 7.8e-156
Identity = 284/309 (91.91%), Postives = 292/309 (94.50%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           MARRKLRELRHTGTI DYVKQFSAVMLDIRDMSEKDKVFVFIEGLK WARTKLYEQRVQD
Sbjct: 250 MARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKLWARTKLYEQRVQD 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP 120
           LATAMA+AERLLDY+SEPSHPKKNATNPTGGNKTFKPFTPK GGADKRP GPNPGPSRGP
Sbjct: 310 LATAMASAERLLDYSSEPSHPKKNATNPTGGNKTFKPFTPKIGGADKRPLGPNPGPSRGP 369

Query: 121 YPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGVETDYEKEKDEEIPR 180
           YPQSQ +QR  SCFLC+GPH+VAECPHRAALTALQASVQSCNEP V TD EKE+DEE PR
Sbjct: 370 YPQSQNAQRPKSCFLCRGPHQVAECPHRAALTALQASVQSCNEPEVGTDCEKEEDEETPR 429

Query: 181 MGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFMSEQEARRLK 240
           MGALKFLSAIQKRVNGPKGTSEKGLMFVDA INCNPAKS MVDSGATHNF+SEQEA RLK
Sbjct: 430 MGALKFLSAIQKRVNGPKGTSEKGLMFVDAXINCNPAKSXMVDSGATHNFISEQEAXRLK 489

Query: 241 LTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLLEH 300
           LTIEKDTGKMKAVNSEALPIVGVSKRV LKLGTWTGS DFVVVRMDDFDVVLGMEFL+EH
Sbjct: 490 LTIEKDTGKMKAVNSEALPIVGVSKRVTLKLGTWTGSXDFVVVRMDDFDVVLGMEFLIEH 549

Query: 301 KVIPMPLDK 310
           KVIPMPL K
Sbjct: 550 KVIPMPLAK 558

[Close]

BLAST of Moc06g18490 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.0 bits (933), Expect = 1.4e-96
Identity = 192/316 (60.76%), Postives = 231/316 (73.10%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           +A  K+  L+HTG I DYV+QFS +MLDIR  +EKDKVF FI GL+PWA+TK++E RVQ 
Sbjct: 250 IAMEKIVALKHTGNIRDYVRQFSTLMLDIRGTAEKDKVFFFINGLQPWAKTKIHENRVQT 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGG-------ADKRPQGPN 120
           LA AMA AERL+D  +E    ++    P  G K ++P   ++G         D+ PQ   
Sbjct: 310 LAAAMACAERLVDCGNEAGSQRRATPAPNNGGKPYRPPGHRNGSPNRSNGWTDRPPQNNQ 369

Query: 121 PGPSRGPYPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGVETDYEKE 180
            G SRGPY Q       + C LCKGPH+V+ CPHRA+LTALQ S+Q  NE  VET  +K+
Sbjct: 370 AGTSRGPYHQKNHPTTPLQCMLCKGPHKVSYCPHRASLTALQVSIQESNEARVETLLDKK 429

Query: 181 KDEEIPRMGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFMSE 240
           +D + PRMGALKFLSA+Q++V  PK   EKGLMFVDATIN   +KST++DSGATHNF+++
Sbjct: 430 EDHDNPRMGALKFLSALQRKVE-PKEIIEKGLMFVDATINSRLSKSTLIDSGATHNFIAD 489

Query: 241 QEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLG 300
           QEARRL LTI KD GKMKAVNSEALPIVGVSK V  K+G WTG +D VVVRMDDFDVVLG
Sbjct: 490 QEARRLGLTIGKDPGKMKAVNSEALPIVGVSKGVPFKIGDWTGELDLVVVRMDDFDVVLG 549

Query: 301 MEFLLEHKVIPMPLDK 310
           MEFLLEHKVIPMPL K
Sbjct: 550 MEFLLEHKVIPMPLAK 564

[Close]

BLAST of Moc06g18490 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.0 bits (933), Expect = 1.4e-96
Identity = 192/316 (60.76%), Postives = 231/316 (73.10%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           +A  K+  L+HTG I DYV+QFS +MLDIR  +EKDKVF FI GL+PWA+TK++E RVQ 
Sbjct: 250 IAMEKIVALKHTGNIRDYVRQFSTLMLDIRGTAEKDKVFFFINGLQPWAKTKIHENRVQT 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGG-------ADKRPQGPN 120
           LA AMA AERL+D  +E    ++    P  G K ++P   ++G         D+ PQ   
Sbjct: 310 LAAAMACAERLVDCGNEAGSQRRATPAPNNGGKPYRPPGHRNGSPNRSNGWTDRPPQNNQ 369

Query: 121 PGPSRGPYPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGVETDYEKE 180
            G SRGPY Q       + C LCKGPH+V+ CPHRA+LTALQ S+Q  NE  VET  +K+
Sbjct: 370 AGTSRGPYHQKNHPTTPLQCMLCKGPHKVSYCPHRASLTALQVSIQESNEARVETLLDKK 429

Query: 181 KDEEIPRMGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFMSE 240
           +D + PRMGALKFLSA+Q++V  PK   EKGLMFVDATIN   +KST++DSGATHNF+++
Sbjct: 430 EDHDNPRMGALKFLSALQRKVE-PKEIIEKGLMFVDATINSRLSKSTLIDSGATHNFIAD 489

Query: 241 QEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLG 300
           QEARRL LTI KD GKMKAVNSEALPIVGVSK V  K+G WTG +D VVVRMDDFDVVLG
Sbjct: 490 QEARRLGLTIGKDPGKMKAVNSEALPIVGVSKGVPFKIGDWTGELDLVVVRMDDFDVVLG 549

Query: 301 MEFLLEHKVIPMPLDK 310
           MEFLLEHKVIPMPL K
Sbjct: 550 MEFLLEHKVIPMPLAK 564

[Close]

BLAST of Moc06g18490 vs. NCBI nr
Match: XP_022975706.1 (uncharacterized protein LOC111475733, partial [Cucurbita maxima])

HSP 1 Score: 362.8 bits (930), Expect = 3.1e-96
Identity = 192/323 (59.44%), Postives = 231/323 (71.52%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           +A  KL  L+HTG I DYV+QFS +MLDIR  SEKDKVF FI GL+PWA+TKL+E +VQ 
Sbjct: 250 LAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFFFINGLQPWAKTKLHENKVQT 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPK--------------SGGAD 120
           LA AMA  ERLLDY +E    ++    P  G K +KP + +              SG  D
Sbjct: 310 LAAAMACVERLLDYGNEAGSQRRITPAPNTGGKPYKPPSHRNGSPNRPNGGNDRPSGWTD 369

Query: 121 KRPQGPNPGPSRGPYPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGV 180
           + PQ    G SR PY Q       + C LCKGPH+V+ CPHR +LTALQ S+Q  N+  V
Sbjct: 370 RPPQNNQAGTSREPYHQRNHPTTPLQCMLCKGPHKVSYCPHRVSLTALQVSIQESNDARV 429

Query: 181 ETDYEKEKDEEIPRMGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGA 240
           ET  +K++D++ PRMGALKFLSA+Q++V  PK   EKGLMFVDATIN  P +ST++DSGA
Sbjct: 430 ETMLDKKEDQDNPRMGALKFLSALQRKVE-PKEIVEKGLMFVDATINFQPNRSTLIDSGA 489

Query: 241 THNFMSEQEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMD 300
           THNF+++QEARRL LTI +D GKMKA+NSEALPIVGVSKRV  K+G WTG +D VV RMD
Sbjct: 490 THNFIADQEARRLGLTIGRDPGKMKAINSEALPIVGVSKRVPFKIGDWTGELDLVVARMD 549

Query: 301 DFDVVLGMEFLLEHKVIPMPLDK 310
           DFDVVLGMEFLLEHKVIPMPL K
Sbjct: 550 DFDVVLGMEFLLEHKVIPMPLAK 571

[Close]

BLAST of Moc06g18490 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.5e-160
Identity = 292/309 (94.50%), Postives = 297/309 (96.12%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           MARRKLRELRHTGTI DYVKQFSAVM+DIRDMSEKDKVFVFIEGLK WARTKLYEQRVQD
Sbjct: 250 MARRKLRELRHTGTIRDYVKQFSAVMMDIRDMSEKDKVFVFIEGLKLWARTKLYEQRVQD 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP 120
           LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP
Sbjct: 310 LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP 369

Query: 121 YPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGVETDYEKEKDEEIPR 180
           YPQSQ +QRLMS FLCKGPHRVAECPHRAALTALQASVQSCNEP VETD EKE+DEE PR
Sbjct: 370 YPQSQNAQRLMSYFLCKGPHRVAECPHRAALTALQASVQSCNEPEVETDCEKEEDEETPR 429

Query: 181 MGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFMSEQEARRLK 240
           M ALKFLSAIQKRVNGPKGTSEKGLMFVDATINCN AKSTMVDSGATHNF+SEQEARRLK
Sbjct: 430 MRALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNXAKSTMVDSGATHNFISEQEARRLK 489

Query: 241 LTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLLEH 300
           LTIEKDTGKMK VN EALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFL+EH
Sbjct: 490 LTIEKDTGKMKVVNFEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEH 549

Query: 301 KVIPMPLDK 310
           KVIPMPL K
Sbjct: 550 KVIPMPLAK 558

[Close]

BLAST of Moc06g18490 vs. ExPASy TrEMBL
Match: A0A6J1DK29 (uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021829 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.8e-156
Identity = 284/309 (91.91%), Postives = 292/309 (94.50%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           MARRKLRELRHTGTI DYVKQFSAVMLDIRDMSEKDKVFVFIEGLK WARTKLYEQRVQD
Sbjct: 250 MARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKLWARTKLYEQRVQD 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGP 120
           LATAMA+AERLLDY+SEPSHPKKNATNPTGGNKTFKPFTPK GGADKRP GPNPGPSRGP
Sbjct: 310 LATAMASAERLLDYSSEPSHPKKNATNPTGGNKTFKPFTPKIGGADKRPLGPNPGPSRGP 369

Query: 121 YPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGVETDYEKEKDEEIPR 180
           YPQSQ +QR  SCFLC+GPH+VAECPHRAALTALQASVQSCNEP V TD EKE+DEE PR
Sbjct: 370 YPQSQNAQRPKSCFLCRGPHQVAECPHRAALTALQASVQSCNEPEVGTDCEKEEDEETPR 429

Query: 181 MGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFMSEQEARRLK 240
           MGALKFLSAIQKRVNGPKGTSEKGLMFVDA INCNPAKS MVDSGATHNF+SEQEA RLK
Sbjct: 430 MGALKFLSAIQKRVNGPKGTSEKGLMFVDAXINCNPAKSXMVDSGATHNFISEQEAXRLK 489

Query: 241 LTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLLEH 300
           LTIEKDTGKMKAVNSEALPIVGVSKRV LKLGTWTGS DFVVVRMDDFDVVLGMEFL+EH
Sbjct: 490 LTIEKDTGKMKAVNSEALPIVGVSKRVTLKLGTWTGSXDFVVVRMDDFDVVLGMEFLIEH 549

Query: 301 KVIPMPLDK 310
           KVIPMPL K
Sbjct: 550 KVIPMPLAK 558

[Close]

BLAST of Moc06g18490 vs. ExPASy TrEMBL
Match: A0A6J1IEY4 (uncharacterized protein LOC111475733 OS=Cucurbita maxima OX=3661 GN=LOC111475733 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.5e-96
Identity = 192/323 (59.44%), Postives = 231/323 (71.52%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           +A  KL  L+HTG I DYV+QFS +MLDIR  SEKDKVF FI GL+PWA+TKL+E +VQ 
Sbjct: 250 LAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFFFINGLQPWAKTKLHENKVQT 309

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPK--------------SGGAD 120
           LA AMA  ERLLDY +E    ++    P  G K +KP + +              SG  D
Sbjct: 310 LAAAMACVERLLDYGNEAGSQRRITPAPNTGGKPYKPPSHRNGSPNRPNGGNDRPSGWTD 369

Query: 121 KRPQGPNPGPSRGPYPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPGV 180
           + PQ    G SR PY Q       + C LCKGPH+V+ CPHR +LTALQ S+Q  N+  V
Sbjct: 370 RPPQNNQAGTSREPYHQRNHPTTPLQCMLCKGPHKVSYCPHRVSLTALQVSIQESNDARV 429

Query: 181 ETDYEKEKDEEIPRMGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGA 240
           ET  +K++D++ PRMGALKFLSA+Q++V  PK   EKGLMFVDATIN  P +ST++DSGA
Sbjct: 430 ETMLDKKEDQDNPRMGALKFLSALQRKVE-PKEIVEKGLMFVDATINFQPNRSTLIDSGA 489

Query: 241 THNFMSEQEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMD 300
           THNF+++QEARRL LTI +D GKMKA+NSEALPIVGVSKRV  K+G WTG +D VV RMD
Sbjct: 490 THNFIADQEARRLGLTIGRDPGKMKAINSEALPIVGVSKRVPFKIGDWTGELDLVVARMD 549

Query: 301 DFDVVLGMEFLLEHKVIPMPLDK 310
           DFDVVLGMEFLLEHKVIPMPL K
Sbjct: 550 DFDVVLGMEFLLEHKVIPMPLAK 571

[Close]

BLAST of Moc06g18490 vs. ExPASy TrEMBL
Match: A0A5A7TAG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00780 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 2.0e-93
Identity = 186/318 (58.49%), Postives = 235/318 (73.90%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           +ARRKLREL+HTG+I  YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA+TKLYEQRVQD
Sbjct: 222 LARRKLRELKHTGSIRKYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQD 281

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNP 120
           L +A AAAERL D +++P   +++ ++ +GG++  +P +PK+ G D+R  G       N 
Sbjct: 282 LTSAYAAAERLFDLSNDPQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFSGDRRSHQSNT 341

Query: 121 GPSRGPYPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQS-CNEPGVETDYEKE 180
           G S         S R +SCF+CKGPH   ECP++ A  A QAS+ S  +    +T+ E  
Sbjct: 342 GNSWRGSSNQNLSNRPLSCFICKGPHMARECPNKTAFNAFQASLTSDSDNQQSQTEGEAN 401

Query: 181 KDEEI--PRMGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFM 240
           + EE+  PRMGALKFLS++QK+V       E+GLM+VD  IN  P KSTMVDSGATHNF+
Sbjct: 402 QTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDTWINQKPTKSTMVDSGATHNFI 461

Query: 241 SEQEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDVV 300
           +E EA+RL L  EKD G+MKAVNS ALPI+G+ KR M++LG W+G VDFVVV+MDDFDVV
Sbjct: 462 TEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVV 521

Query: 301 LGMEFLLEHKVIPMPLDK 310
           LGMEFLLEH+VIPMPL K
Sbjct: 522 LGMEFLLEHQVIPMPLAK 539

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BLAST of Moc06g18490 vs. ExPASy TrEMBL
Match: A0A5D3CW71 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00870 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 4.5e-93
Identity = 188/319 (58.93%), Postives = 239/319 (74.92%), Query Frame = 0


Query: 1   MARRKLRELRHTGTILDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQD 60
           +ARRKLREL+HTG+I +YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA+TKLYEQRVQD
Sbjct: 231 LARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQD 290

Query: 61  LATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNP 120
           L +A AAAERL D ++     +++ ++ +GG++  +P +PK+ G D+R  G       N 
Sbjct: 291 LTSAYAAAERLFDLSNNSQDTRRHLSSSSGGSRNNRPSSPKTTGGDRRFNGDCRSHQSNT 350

Query: 121 GPS-RGPYPQSQKSQRLMSCFLCKGPHRVAECPHRAALTALQASVQS-CNEPGVETDYEK 180
           G S RGP  Q+  S R +SCF+CKGPH   ECP++ A  A QAS+ S  N    +T+ E 
Sbjct: 351 GNSWRGPSNQN-VSNRPLSCFICKGPHMARECPNKTAFNAFQASLASDSNNQQNQTEREA 410

Query: 181 EKDEEI--PRMGALKFLSAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNF 240
            + EE+  PRMGALKFLS++QK+V       E+GLM+VD  IN  P KSTMVDSGATHNF
Sbjct: 411 YQTEEVDNPRMGALKFLSSLQKKVGETNTPVERGLMYVDTWINEKPTKSTMVDSGATHNF 470

Query: 241 MSEQEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVMLKLGTWTGSVDFVVVRMDDFDV 300
           ++E +A+RL +  EKD G+MKAVNS ALPI+G+ KR M++LG W+G VDFVVV+MDDFDV
Sbjct: 471 ITEAKAKRLNIRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDV 530

Query: 301 VLGMEFLLEHKVIPMPLDK 310
           VLGMEFLLEH+VIPMPL K
Sbjct: 531 VLGMEFLLEHRVIPMPLAK 548

The following BLAST results are available for this feature:

BLAST of Moc06g18490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150099.1	4.0e-160	94.17	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
XP_022154605.1	7.8e-156	91.91	uncharacterized protein LOC111021829 [Momordica charantia]	[more]
XP_023537907.1	1.4e-96	60.76	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]
XP_023524533.1	1.4e-96	60.76	uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]	[more]
XP_022975706.1	3.1e-96	59.44	uncharacterized protein LOC111475733, partial [Cucurbita maxima]	[more]

BLAST of Moc06g18490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g18490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D906	1.5e-160	94.50	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A6J1DK29	3.8e-156	91.91	uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1IEY4	1.5e-96	59.44	uncharacterized protein LOC111475733 OS=Cucurbita maxima OX=3661 GN=LOC111475733...	[more]
A0A5A7TAG9	2.0e-93	58.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35...	[more]
A0A5D3CW71	4.5e-93	58.93	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold47...	[more]

BLAST of Moc06g18490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 208..302 e-value: 6.0E-11 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..338
None	No IPR available	PANTHER	PTHR34482:SF18	RETROTRANSPOSON GAG DOMAIN, ASPARTIC PEPTIDASE DOMAIN PROTEIN-RELATED	coord: 2..287
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 2..287
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 208..297 e-value: 2.77137E-19 score: 79.3027
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 189..306 e-value: 1.6E-21 score: 78.4
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 204..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g18490.1	Moc06g18490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003676	nucleic acid binding