Moc06g18290 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g18290
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr6: 14323427 .. 14326137 (-)
RNA-Seq ExpressionMoc06g18290
SyntenyMoc06g18290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCTTTATTTCCATCTTGGGGAACCTATGGTTCCAGATAGGGTGCCAGTTGTTTCGGATCCAGGCCAGGTTTGGCCTGTTGTGGGTGGAAATCGCTTTGCTACATTGGCATCTAGTGAAGATGTTATTGAGGTTGTCATTGACACAGGTCAGGTGGTGAGTCGGGGGTGGGGGGAGGGGTGGGGATTTTCTCGACCTTTTGGGGGTTTTGATGAGCCTCAAGGTGATAAGAATGAGGGTTTTACTGCAGTTGTATCCAGATGTGCTAAACAGTGGCTTGGTGATTCTTCAATTACAAGGGTGGGTTCTTCTTCCCCTCCCGTTTCTCATATCTAGTTGGTGTTCGTGGAATATGCGGGGCTTGATTACCACCATGAAGGGCTAGGAGGTCCGCTCATTTCTGAGTAGTGGGGTGCTGAGTTCTATTGTTTGGTGGAAACATGAGTTATGCATTGTAACTTTGAGTCGGTTTTTTCGGCCCTTTCAGGGTCATTGGCAGTGTGTGAGCAGTTATTCTTCTTTTGATTTAGGGTAGATATGGGTGATGTAGCATCCAGACCGTTATGCTTTTACTTCACTTGCTCTTTCTTACCAGTTTGTGCATGGGGTGGTGCTTGACAGGGTCTTTGTTGCGTGAAACCGATGTGGATGCAATTGCAAGTGTACACTATTATAGCCGATTGTAGCATAAACAAGGTCGAAGTCCTCAGAGACTAAGGATATTACTCTAAACATGCACTTAAGAATACAAAAAAAATGCAAATAAAAGATAATCAATGGTTGTATAACTACAACTAAGTAAAATACTAGAAAATACAAAAAGAAATTCCATGAGAGAAATAATGTAATAACAGATGCTTGGGCAAAGACATGTTTTAGCAAAACAAACAGAACGGGGGAAATAGACAATGATATGAGTACGGGTGATCACTATATGCTTTCACTCGCTCATAAAAAATGCTTTAACATACATGTTGATGCTAAAACGACATGGTTCTCTTCCGAGACACCCAAAAATGAATATCTACAACTTTCGTTGCTAAATACCAAAGCATAAAGAACAGTTTATAAGCATGGTTAGGCGGACCTTATTTCTAAGCATCCACAAATTAACTAGAAAAAAGTAACTAACCACAAAGATAGCCAAACACATTACCTATATACCCTTCCGAGTCATACAACAGCAAACAAACTCATAAATGTGGCCATCATAGATCAGTAAGATGAAAATATTACATCAACTCTATTTAACAACAACAAAAATATGCTAGAAAGCCTCTGTTCACAAGCTACATTAAAGGATCCCCGTGAAAATAAGGTTTAGTTTATGGGGAATGGAGAAAATACAATGGGTAAAGAGAGAAACAACCCATTTAGTGGAAAGACTTTGGGAAATCCTTTGAAACCTCTAAGTCAGTGAGAAACCAGAAGTTTTAGCTTCCTCTTGTCGGCTTCTTCTAAAGATGGGAGCAGCTTTCTTTAACTTCAGCACGTTGTGGGAGTAATTTATCTTCTTGGGATCTTTTCGCCCTTAGGGATTGATGATGAGACAACTCTCATCTTGTTGCTTTTATAGCTCTCCCGAAAATTAGGGCAAAACTTAGTAAAACGTGTGTTGTACGGGCATAAGTGAAAATCAGGCGTGTTACTACTCTACCCAAGAATTTATGCAGAAAGTGATGCTTGAGCACAACATGGTCTAGCCTGACAATGCTCCAGCATTTCTCCTCTAATTCTGCTGCTCCTCAACAACTTCTCCATATTCTGCACAACTAAGCCAAAATAGGGCAAATAAGCAGGAACTTGCGTAAATTCGACAACATGAAGATTTAGAATGTGATAATCATCTTTTTCACTCAATTTCTCACTTAAGCATGCAATTTAGGCAAAGACCCATATATTAAAGCATACATTAACCCAATTATTTACTAAAATAACTTTCTTTTGGAGAGTTATCAGTCTTTCAGATTTCGGTTTGAGTTCTTTGTGTGTATGCAGCGAATTCCCCTTCCGAGTAGTCTTCTCTATAGGACTCTTTAATGTCTATTTGTTCCTCATGGAGTGGTTATGGGTGACGTTAGTTCTATTCGTCATTCGTCAGAGGTTTTAGGTGGTAATCCGGATATGACAGAGATGGTTCGATTTGATGAGACATTGCTGCAGGGTGATCTCGTTGAGCCTCGTGTGTCTGAGCCTTGGTTTACTGGGACGAACTAGCAGTTAGGGGCCGGTTTGATTCTGAAGTGGCTTAATTATGTTCTGGTCAATTCGGCCTGGTTTGAATCCATGCCTGTTTTTGAGGTTCAGGTACGAGAGTGGGATGTTTTCAATCATTGCCCTTCTATATTTTATGTGGTTGTTTTTATTTCGAGGAAGTGGCCTTCCTTTAGATTTTTTGACCATTGGGCCGCTCATGTGCAGTTTCTTCCTTCTGTTCGAGCTCTTGGAAGTCGTTTCCGTAGGTTTCACCCATTTTGAGTTTTTCCTATAATCTCAGGGCACTTAAACCTGTGTTGCGTCATTTGGGTCACACTCTAAGTACTACTCCAAAGGGTGTTCAGGAGGCGCGTGCTCGGATTGCAGCTGCGCAGGCGATGTTGTTGAGTGATCCCTTGTCTGTTTCTGCTCAGGAGGAGTGGTTGGTGGTGCAGGAGTTCTGGGCTTGGGCTGGGAAAGAGGAGGCACAGCTTCATAAGCATTGGGTCTAG

mRNA sequence

ATGCTCCTTTATTTCCATCTTGGGGAACCTATGGTTCCAGATAGGGTGCCAGTTGTTTCGGATCCAGGCCAGGTTTGGCCTGTTGTGGGTGGAAATCGCTTTGCTACATTGGCATCTAGTGAAGATGTTATTGAGGTTGTCATTGACACAGGTCAGGTGGTGAGTCGGGGGTGGGGGGAGGGGTGGGGATTTTCTCGACCTTTTGGGGGTTTTGATGAGCCTCAAGGTGATAAGAATGAGGGTTTTACTGCAGTTGTATCCAGATGTGCTAAACAGTGGCTTGGTGATTCTTCAATTACAAGGGTGGGTTCTTCTTCCCCTCCCGTTTCTCATATCTATTTGTGCATGGGGTGGTGCTTGACAGGGTCTTTGTTGCGTGAAACCGATGTGGATGCAATTGCAATGGTTATGGGTGACGTTAGTTCTATTCGTCATTCGTCAGAGGTTTTAGGTGGTAATCCGGATATGACAGAGATGGTTCGATTTGATGAGACATTGCTGCAGGGTGATCTCGTTGAGCCTCGTGTGTCTGAGCCTTGGGCACTTAAACCTGTGTTGCGTCATTTGGGTCACACTCTAAGTACTACTCCAAAGGGTGTTCAGGAGGCGCGTGCTCGGATTGCAGCTGCGCAGGCGATGTTGTTGAGTGATCCCTTGTCTGTTTCTGCTCAGGAGGAGTGGTTGGTGGTGCAGGAGTTCTGGGCTTGGGCTGGGAAAGAGGAGGCACAGCTTCATAAGCATTGGGTCTAG

Coding sequence (CDS)

ATGCTCCTTTATTTCCATCTTGGGGAACCTATGGTTCCAGATAGGGTGCCAGTTGTTTCGGATCCAGGCCAGGTTTGGCCTGTTGTGGGTGGAAATCGCTTTGCTACATTGGCATCTAGTGAAGATGTTATTGAGGTTGTCATTGACACAGGTCAGGTGGTGAGTCGGGGGTGGGGGGAGGGGTGGGGATTTTCTCGACCTTTTGGGGGTTTTGATGAGCCTCAAGGTGATAAGAATGAGGGTTTTACTGCAGTTGTATCCAGATGTGCTAAACAGTGGCTTGGTGATTCTTCAATTACAAGGGTGGGTTCTTCTTCCCCTCCCGTTTCTCATATCTATTTGTGCATGGGGTGGTGCTTGACAGGGTCTTTGTTGCGTGAAACCGATGTGGATGCAATTGCAATGGTTATGGGTGACGTTAGTTCTATTCGTCATTCGTCAGAGGTTTTAGGTGGTAATCCGGATATGACAGAGATGGTTCGATTTGATGAGACATTGCTGCAGGGTGATCTCGTTGAGCCTCGTGTGTCTGAGCCTTGGGCACTTAAACCTGTGTTGCGTCATTTGGGTCACACTCTAAGTACTACTCCAAAGGGTGTTCAGGAGGCGCGTGCTCGGATTGCAGCTGCGCAGGCGATGTTGTTGAGTGATCCCTTGTCTGTTTCTGCTCAGGAGGAGTGGTTGGTGGTGCAGGAGTTCTGGGCTTGGGCTGGGAAAGAGGAGGCACAGCTTCATAAGCATTGGGTCTAG

Protein sequence

MLLYFHLGEPMVPDRVPVVSDPGQVWPVVGGNRFATLASSEDVIEVVIDTGQVVSRGWGEGWGFSRPFGGFDEPQGDKNEGFTAVVSRCAKQWLGDSSITRVGSSSPPVSHIYLCMGWCLTGSLLRETDVDAIAMVMGDVSSIRHSSEVLGGNPDMTEMVRFDETLLQGDLVEPRVSEPWALKPVLRHLGHTLSTTPKGVQEARARIAAAQAMLLSDPLSVSAQEEWLVVQEFWAWAGKEEAQLHKHWV
Homology
[Close]
BLAST of Moc06g18290 vs. NCBI nr
Match: XP_022159081.1 (uncharacterized protein LOC111025522 [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-15
Identity = 72/215 (33.49%), Postives = 87/215 (40.47%), Query Frame = 0 

Query: 137 MGDVSSIRHSSEVLGGNPDMTEMVRFDETLLQGDLVEPRVSEPW---------------- 196
           MGD ++IRHSSEVLGG+P +T++  FD+ LLQ DLVEPRVSE W                
Sbjct: 1   MGDFNAIRHSSEVLGGSPVLTDIEDFDDVLLQADLVEPRVSESWFTWTNKHLRDGLILKG 60

Query: 197 ------------------------------------------------------------ 250
                                                                       
Sbjct: 61  LDRVLVNSAWFGSMPVFEVQVREWGVSDHCPLVFLVGAVVPRCRPSFRFFDYWAADRLLL 120

[Close]
BLAST of Moc06g18290 vs. NCBI nr
Match: XP_022158199.1 (uncharacterized protein LOC111024737 [Momordica charantia])

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-09
Identity = 40/67 (59.70%), Postives = 47/67 (70.15%), Query Frame = 0 

Query: 181 ALKPVLRHLGHTLSTTPKGVQEARARIAAAQAMLLSDPLSVSAQEEWLV-VQEFWAWAGK 240
           ALKPVLR  GH + T  KGVQEARAR+ A QA+LLS P S+ AQEE  V  ++FW WA  
Sbjct: 332 ALKPVLRRFGHQIDTIQKGVQEARARMLATQALLLSVPSSIGAQEEERVATRDFWDWAVM 391

Query: 241 EEAQLHK 247
           EEA L +
Sbjct: 392 EEASLRQ 398

[Close]
BLAST of Moc06g18290 vs. NCBI nr
Match: XP_022157428.1 (uncharacterized protein LOC111024128 [Momordica charantia])

HSP 1 Score: 72.4 bits (176), Expect = 6.2e-09
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 0 

Query: 181 ALKPVLRHLGHTLSTTPKGVQEARARIAAAQAMLLSDPLSVSAQEEWLVV-QEFWAWAGK 240
           ALKPVL   GH + T  KGVQEARA + AAQA+LLSDP S+ AQEE  V  ++FW W   
Sbjct: 445 ALKPVLHRFGHHIDTIQKGVQEARALMLAAQALLLSDPSSIGAQEEERVASRDFWDWTVM 504

Query: 241 EEAQLHK 247
           EEA L +
Sbjct: 505 EEASLRQ 511

[Close]
BLAST of Moc06g18290 vs. ExPASy TrEMBL
Match: A0A6J1E2U5 (uncharacterized protein LOC111025522 OS=Momordica charantia OX=3673 GN=LOC111025522 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.6e-16
Identity = 72/215 (33.49%), Postives = 87/215 (40.47%), Query Frame = 0 

Query: 137 MGDVSSIRHSSEVLGGNPDMTEMVRFDETLLQGDLVEPRVSEPW---------------- 196
           MGD ++IRHSSEVLGG+P +T++  FD+ LLQ DLVEPRVSE W                
Sbjct: 1   MGDFNAIRHSSEVLGGSPVLTDIEDFDDVLLQADLVEPRVSESWFTWTNKHLRDGLILKG 60

Query: 197 ------------------------------------------------------------ 250
                                                                       
Sbjct: 61  LDRVLVNSAWFGSMPVFEVQVREWGVSDHCPLVFLVGAVVPRCRPSFRFFDYWAADRLLL 120

[Close]
BLAST of Moc06g18290 vs. ExPASy TrEMBL
Match: A0A6J1DYP6 (uncharacterized protein LOC111024737 OS=Momordica charantia OX=3673 GN=LOC111024737 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 40/67 (59.70%), Postives = 47/67 (70.15%), Query Frame = 0 

Query: 181 ALKPVLRHLGHTLSTTPKGVQEARARIAAAQAMLLSDPLSVSAQEEWLV-VQEFWAWAGK 240
           ALKPVLR  GH + T  KGVQEARAR+ A QA+LLS P S+ AQEE  V  ++FW WA  
Sbjct: 332 ALKPVLRRFGHQIDTIQKGVQEARARMLATQALLLSVPSSIGAQEEERVATRDFWDWAVM 391

Query: 241 EEAQLHK 247
           EEA L +
Sbjct: 392 EEASLRQ 398

[Close]
BLAST of Moc06g18290 vs. ExPASy TrEMBL
Match: A0A6J1DTC3 (uncharacterized protein LOC111024128 OS=Momordica charantia OX=3673 GN=LOC111024128 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-09
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 0 

Query: 181 ALKPVLRHLGHTLSTTPKGVQEARARIAAAQAMLLSDPLSVSAQEEWLVV-QEFWAWAGK 240
           ALKPVL   GH + T  KGVQEARA + AAQA+LLSDP S+ AQEE  V  ++FW W   
Sbjct: 445 ALKPVLHRFGHHIDTIQKGVQEARALMLAAQALLLSDPSSIGAQEEERVASRDFWDWTVM 504

Query: 241 EEAQLHK 247
           EEA L +
Sbjct: 505 EEASLRQ 511

The following BLAST results are available for this feature:
BLAST of Moc06g18290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159081.11.2e-1533.49uncharacterized protein LOC111025522 [Momordica charantia][more]
XP_022158199.12.1e-0959.70uncharacterized protein LOC111024737 [Momordica charantia][more]
XP_022157428.16.2e-0958.21uncharacterized protein LOC111024128 [Momordica charantia][more]
BLAST of Moc06g18290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc06g18290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E2U55.6e-1633.49uncharacterized protein LOC111025522 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DYP61.0e-0959.70uncharacterized protein LOC111024737 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DTC33.0e-0958.21uncharacterized protein LOC111024128 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
BLAST of Moc06g18290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g18290.1Moc06g18290.1mRNA