Moc06g17220 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g17220
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr6: 13469532 .. 13470226 (+)
RNA-Seq Expression	Moc06g17220
Synteny	Moc06g17220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTCCACTTCACCGTGGAAGAGTCGAACCGGGCTGTCATAGACGAGCAGAGTCAGGTCAGCTTCATTCTAGAATCTCTTCCGAAGAGTTTCCTGCCATTCTGCAGCAATGCGGTTATGAATAAGCTGAAGTACACTCTTACCACGCTCTTAACGAGCTGCAGACCTACCAGTCTCTTAAATGTAAGGGACAATAAGGGGAGGCAAATGTTGTCACCTCAAAGAGATTCAACCGAGGTTCGTCCTCTGGAACCAAGTCTGCACCCTCTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAGGCTGCTGGTAAGGGGTTTAAACTTGACTCCGCTCCTGCCGCTGTCAAGAAAGGCAAGGCCAAAGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGTGCATTGGAAGCGCAATTGCCCAAAATACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCACTTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAACTTGATGTCGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAACTGTGGCAGTAGGGGAGCTCAAGTTGTTTACAAACAAGAATTTGTATATATGA

mRNA sequence

ATGATGGTCCACTTCACCGTGGAAGAGTCGAACCGGGCTGTCATAGACGAGCAGAGTCAGGTCAGCTTCATTCTAGAATCTCTTCCGAAGAGTTTCCTGCCATTCTGCAGCAATGCGGTTATGAATAAGCTGAAGTACACTCTTACCACGCTCTTAACGAGCTGCAGACCTACCAGTCTCTTAAATACTTTCAAGAAGAAGAAGGCTGCTGGTAAGGGGTTTAAACTTGACTCCGCTCCTGCCGCTGTCAAGAAAGGCAAGGCCAAAGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGTGCATTGGAAGCGCAATTGCCCAAAATACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCACTTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAACTTGATGTCGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAACTGTGGCAGTAGGGGAGCTCAAGTTGTTTACAAACAAGAATTTGTATATATGA

Coding sequence (CDS)

ATGATGGTCCACTTCACCGTGGAAGAGTCGAACCGGGCTGTCATAGACGAGCAGAGTCAGGTCAGCTTCATTCTAGAATCTCTTCCGAAGAGTTTCCTGCCATTCTGCAGCAATGCGGTTATGAATAAGCTGAAGTACACTCTTACCACGCTCTTAACGAGCTGCAGACCTACCAGTCTCTTAAATACTTTCAAGAAGAAGAAGGCTGCTGGTAAGGGGTTTAAACTTGACTCCGCTCCTGCCGCTGTCAAGAAAGGCAAGGCCAAAGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAATATGGACGTGCATTGGAAGCGCAATTGCCCAAAATACTTGGCCGAAAAGAAGAAAGCCAACGAAGGTAAATATGATTTACTTGTTTTGGAAACATGTTTAGTGGAGAACGATGACTCCACTTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGAGGCAACTTGATGTCGGAGAGATGACTCTCAAGGTCGGAACGGGAGAGGTCGTCTCAACTGTGGCAGTAGGGGAGCTCAAGTTGTTTACAAACAAGAATTTGTATATATGA

Protein sequence

MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLLTSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKKGKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDSGATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI

Homology

[Close]

BLAST of Moc06g17220 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 6.5e-62
Identity = 139/232 (59.91%), Postives = 156/232 (67.24%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 135 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 194

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 195 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 254

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 255 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 314

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSW+QL+ GEMT++VGTG VVS +AVG L+L+  K+  +
Sbjct: 315 GATNHVCSSFQGISSWQQLETGEMTMRVGTGHVVSAIAVGGLRLYLQKSFLL 364

[Close]

BLAST of Moc06g17220 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 8.5e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 134 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 193

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 194 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 253

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 254 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 313

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 314 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 363

[Close]

BLAST of Moc06g17220 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 8.5e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 135 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 194

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 195 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 254

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 255 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 314

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 315 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 364

[Close]

BLAST of Moc06g17220 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 8.5e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 135 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 194

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 195 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 254

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 255 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 314

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 315 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 364

[Close]

BLAST of Moc06g17220 vs. NCBI nr
Match: KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 8.5e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 252 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 311

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 312 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 371

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 372 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 431

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 432 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 481

[Close]

BLAST of Moc06g17220 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 139/232 (59.91%), Postives = 156/232 (67.24%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 135 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 194

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 195 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 254

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 255 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 314

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSW+QL+ GEMT++VGTG VVS +AVG L+L+  K+  +
Sbjct: 315 GATNHVCSSFQGISSWQQLETGEMTMRVGTGHVVSAIAVGGLRLYLQKSFLL 364

[Close]

BLAST of Moc06g17220 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.1e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 135 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 194

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 195 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 254

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 255 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 314

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 315 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 364

[Close]

BLAST of Moc06g17220 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.1e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 252 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 311

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 312 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 371

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 372 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 431

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 432 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 481

[Close]

BLAST of Moc06g17220 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.1e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 135 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 194

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 195 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 254

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 255 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 314

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 315 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 364

[Close]

BLAST of Moc06g17220 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.1e-62
Identity = 140/232 (60.34%), Postives = 155/232 (66.81%), Query Frame = 0


Query: 1   MMVHFTVEESNRAVIDEQSQVSFILESLPKSFLPFCSNAVMNKLKYTLTTLL-------- 60
           MMVHF V E N AVIDE SQVSFILESLP+SFL F SNAVMNK+ YTLTTLL        
Sbjct: 134 MMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 193

Query: 61  ---------------------------TSCRPTSLLNTFKKKKAAGKGFKLDSAPAAVKK 120
                                      T   P+S  N   KKK  G+G K + A A   K
Sbjct: 194 LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 253

Query: 121 GKAKVAEKGKCFHCNMDVHWKRNCPKYLAEKKKANEGKYDLLVLETCLVENDDSTWILDS 180
            KAK A KG CFHCN + HWKRNCPKYLAEKKKA +GKYDLLVLETCLVENDDS WI+DS
Sbjct: 254 -KAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDS 313

Query: 181 GATNHVCSSFQGISSWRQLDVGEMTLKVGTGEVVSTVAVGELKLFTNKNLYI 198
           GATNHVCSSFQGISSWRQL+ GEMT++VGTG VVS +AVG L+L   K+  +
Sbjct: 314 GATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLL 363

The following BLAST results are available for this feature:

BLAST of Moc06g17220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044955.1	6.5e-62	59.91	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	8.5e-62	60.34	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	8.5e-62	60.34	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0047792.1	8.5e-62	60.34	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0062993.1	8.5e-62	60.34	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Moc06g17220 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g17220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU93	3.2e-62	59.91	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7SMH8	4.1e-62	60.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5A7V4M1	4.1e-62	60.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5A7TWB9	4.1e-62	60.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5A7TZD7	4.1e-62	60.34	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]

BLAST of Moc06g17220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 81..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g17220.1	Moc06g17220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding