Moc06g17040 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g17040
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr6: 13382140 .. 13382626 (-)
RNA-Seq Expression	Moc06g17040
Synteny	Moc06g17040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTACTTCTTCACCGGCCTGGTCGATGAGACCTTGACGGTCAAGTTGGGAGAGGAGGTGTCGTCTACCTTTGCGGAGGTCTTACAGAAGACCAAAATGGTTATTGACAGGTAAGAGCTGCGAGAACGAAGCTGGGTTGGACAGAAAAGAAGTCCGACCAGAAGAATCCCAACTATCAGGACAAGGGGAAGACTGATTCTAAGTCTAAGGACAAATGATCGTCTTCTCAGCCCTCTCAGAGCGACCTGATTATAGAAGATCGGATTCGGACTCTAGCCGAAGACGACCTTACGAAAGATACACCCCAACAACCATTCCCATCTCAGAGATCCTTACTAACATTGAAGAGACAGGGCTGGAAAAACTCTTCAAGCGCCCTAAGAAGCTTATAGGAGATCCTGAGAAGCGCAACAAGGACAAGTATTGTCGTTTCCATCACGACCACGACCACGATACCTCGAGTTGCTGGGAGCTGAAGCACTAG

mRNA sequence

ATGTGCTACTTCTTCACCGGCCTGGTCGATGAGACCTTGACGGTCAAGTTGGGAGAGGAGGTGTCGTCTACCTTTGCGGAGGTCTTACAGAAGACCAAAATGGTTATTGACAGAAGATCGGATTCGGACTCTAGCCGAAGACGACCTTACGAAAGATACACCCCAACAACCATTCCCATCTCAGAGATCCTTACTAACATTGAAGAGACAGGGCTGGAAAAACTCTTCAAGCGCCCTAAGAAGCTTATAGGAGATCCTGAGAAGCGCAACAAGGACAAGTATTGTCGTTTCCATCACGACCACGACCACGATACCTCGAGTTGCTGGGAGCTGAAGCACTAG

Coding sequence (CDS)

ATGTGCTACTTCTTCACCGGCCTGGTCGATGAGACCTTGACGGTCAAGTTGGGAGAGGAGGTGTCGTCTACCTTTGCGGAGGTCTTACAGAAGACCAAAATGGTTATTGACAGAAGATCGGATTCGGACTCTAGCCGAAGACGACCTTACGAAAGATACACCCCAACAACCATTCCCATCTCAGAGATCCTTACTAACATTGAAGAGACAGGGCTGGAAAAACTCTTCAAGCGCCCTAAGAAGCTTATAGGAGATCCTGAGAAGCGCAACAAGGACAAGTATTGTCGTTTCCATCACGACCACGACCACGATACCTCGAGTTGCTGGGAGCTGAAGCACTAG

Protein sequence

MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVIDRRSDSDSSRRRPYERYTPTTIPISEILTNIEETGLEKLFKRPKKLIGDPEKRNKDKYCRFHHDHDHDTSSCWELKH

Homology

[Close]

BLAST of Moc06g17040 vs. NCBI nr
Match: XP_022159160.1 (uncharacterized protein LOC111025585 [Momordica charantia])

HSP 1 Score: 187.6 bits (475), Expect = 6.0e-44
Identity = 93/112 (83.04%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVIDRRSDSDSSRRRPYERYTPTTIPI 60
           MCYF T L DETLTVKLGEE  STFAEVLQK K VID RSDSDSSRR PYE YTPTTIPI
Sbjct: 155 MCYFLTTLADETLTVKLGEEAPSTFAEVLQKAKKVIDGRSDSDSSRRGPYEGYTPTTIPI 214

Query: 61  SEILTNIEETGLEKLFKRPKKLIGDPEKRNKDKYCRFHHDHDHDTSSCWELK 113
           SEILTNIEE GLEKL KRP KL GDPEKRNKD+YCRFH DH +DTS+CWELK
Sbjct: 215 SEILTNIEENGLEKLLKRPDKLRGDPEKRNKDRYCRFHRDHGYDTSNCWELK 266

[Close]

BLAST of Moc06g17040 vs. NCBI nr
Match: XP_022154446.1 (uncharacterized protein LOC111021718 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 94/129 (72.87%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID----------------RRSDSDS 60
           MCYF TGL DETLTVKLGEEV+STF EVLQK K VID                +RSDSDS
Sbjct: 116 MCYFLTGLADETLTVKLGEEVTSTFVEVLQKAKKVIDGQKLLRTKLGRGRSDYKRSDSDS 175

Query: 61  SRRRPYERYTPTTIPISEILTNIEETGLEKLFKRPKKLIGDPEKRNKDKYCRFHHDHDHD 114
           + R PY+RYTPTTIPISEILTNIEE GLEKL KRP KL GDPEKRNKD+YCRFH DH HD
Sbjct: 176 NCRGPYDRYTPTTIPISEILTNIEENGLEKLLKRPDKLRGDPEKRNKDRYCRFHRDHGHD 235

[Close]

BLAST of Moc06g17040 vs. NCBI nr
Match: XP_022159079.1 (uncharacterized protein LOC111025521 [Momordica charantia])

HSP 1 Score: 170.6 bits (431), Expect = 7.6e-39
Identity = 93/158 (58.86%), Postives = 98/158 (62.03%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID----------------------- 60
           MCYF TGL DETLTVKLGEE  +TFAEVLQK K VID                       
Sbjct: 93  MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKKIDQGRAGK 152

Query: 61  -----------------------RRSDSDSSRRRPYERYTPTTIPISEILTNIEETGLEK 113
                                  RRSDS  +R RPYERYTPTTIP SEILTNIEETG+EK
Sbjct: 153 DKGKADSKSKDKGSSSSSSQADYRRSDSSRNRSRPYERYTPTTIPSSEILTNIEETGMEK 212

[Close]

BLAST of Moc06g17040 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 2.9e-38
Identity = 89/127 (70.08%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID--------------RRSDSDSSR 60
           MCYF TGL DETLTVKLGEE  STFAEVLQK K V+D              RRS+SDS+R
Sbjct: 153 MCYFLTGLADETLTVKLGEEAPSTFAEVLQKAKKVLDGQELLKTKLGQTDKRRSNSDSNR 212

Query: 61  RRPYERYTPTTIPISEILTNIEETGLEKLFKRPKKLIGDPEKRNKDKYCRFHHDHDHDTS 114
           R PYERYTPTTI I EILTNIEE GLEKL KRP KL G PEK +KD+YCRFH D  HDT 
Sbjct: 213 RGPYERYTPTTILIFEILTNIEENGLEKLLKRPDKLRGHPEKCSKDRYCRFHRDDGHDTL 272

[Close]

BLAST of Moc06g17040 vs. NCBI nr
Match: XP_022145827.1 (uncharacterized protein LOC111015187 [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 7.1e-37
Identity = 90/158 (56.96%), Postives = 100/158 (63.29%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID----------------------- 60
           MCYF TGL DETLTVKLG+E  +TFAEVLQK K VID                       
Sbjct: 1   MCYFLTGLADETLTVKLGDEAPATFAEVLQKAKKVIDGQELLRTKTGRLKKQIDQKKLSQ 60

Query: 61  --RRSDSDS---------------------SRRRPYERYTPTTIPISEILTNIEETGLEK 113
             R+SDS S                     +R RPYERYTPTTIPISEILTNIEE+G+EK
Sbjct: 61  EKRKSDSKSKDNGSSFSGSRTEYHRSEIGFNRSRPYERYTPTTIPISEILTNIEESGMEK 120

[Close]

BLAST of Moc06g17040 vs. ExPASy TrEMBL
Match: A0A6J1DXW4 (uncharacterized protein LOC111025585 OS=Momordica charantia OX=3673 GN=LOC111025585 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 93/112 (83.04%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVIDRRSDSDSSRRRPYERYTPTTIPI 60
           MCYF T L DETLTVKLGEE  STFAEVLQK K VID RSDSDSSRR PYE YTPTTIPI
Sbjct: 155 MCYFLTTLADETLTVKLGEEAPSTFAEVLQKAKKVIDGRSDSDSSRRGPYEGYTPTTIPI 214

Query: 61  SEILTNIEETGLEKLFKRPKKLIGDPEKRNKDKYCRFHHDHDHDTSSCWELK 113
           SEILTNIEE GLEKL KRP KL GDPEKRNKD+YCRFH DH +DTS+CWELK
Sbjct: 215 SEILTNIEENGLEKLLKRPDKLRGDPEKRNKDRYCRFHRDHGYDTSNCWELK 266

[Close]

BLAST of Moc06g17040 vs. ExPASy TrEMBL
Match: A0A6J1DNR4 (uncharacterized protein LOC111021718 OS=Momordica charantia OX=3673 GN=LOC111021718 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.5e-43
Identity = 94/129 (72.87%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID----------------RRSDSDS 60
           MCYF TGL DETLTVKLGEEV+STF EVLQK K VID                +RSDSDS
Sbjct: 116 MCYFLTGLADETLTVKLGEEVTSTFVEVLQKAKKVIDGQKLLRTKLGRGRSDYKRSDSDS 175

Query: 61  SRRRPYERYTPTTIPISEILTNIEETGLEKLFKRPKKLIGDPEKRNKDKYCRFHHDHDHD 114
           + R PY+RYTPTTIPISEILTNIEE GLEKL KRP KL GDPEKRNKD+YCRFH DH HD
Sbjct: 176 NCRGPYDRYTPTTIPISEILTNIEENGLEKLLKRPDKLRGDPEKRNKDRYCRFHRDHGHD 235

[Close]

BLAST of Moc06g17040 vs. ExPASy TrEMBL
Match: A0A6J1E1B3 (uncharacterized protein LOC111025521 OS=Momordica charantia OX=3673 GN=LOC111025521 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.7e-39
Identity = 93/158 (58.86%), Postives = 98/158 (62.03%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID----------------------- 60
           MCYF TGL DETLTVKLGEE  +TFAEVLQK K VID                       
Sbjct: 93  MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKKIDQGRAGK 152

Query: 61  -----------------------RRSDSDSSRRRPYERYTPTTIPISEILTNIEETGLEK 113
                                  RRSDS  +R RPYERYTPTTIP SEILTNIEETG+EK
Sbjct: 153 DKGKADSKSKDKGSSSSSSQADYRRSDSSRNRSRPYERYTPTTIPSSEILTNIEETGMEK 212

[Close]

BLAST of Moc06g17040 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38
Identity = 89/127 (70.08%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID--------------RRSDSDSSR 60
           MCYF TGL DETLTVKLGEE  STFAEVLQK K V+D              RRS+SDS+R
Sbjct: 153 MCYFLTGLADETLTVKLGEEAPSTFAEVLQKAKKVLDGQELLKTKLGQTDKRRSNSDSNR 212

Query: 61  RRPYERYTPTTIPISEILTNIEETGLEKLFKRPKKLIGDPEKRNKDKYCRFHHDHDHDTS 114
           R PYERYTPTTI I EILTNIEE GLEKL KRP KL G PEK +KD+YCRFH D  HDT 
Sbjct: 213 RGPYERYTPTTILIFEILTNIEENGLEKLLKRPDKLRGHPEKCSKDRYCRFHRDDGHDTL 272

[Close]

BLAST of Moc06g17040 vs. ExPASy TrEMBL
Match: A0A6J1CXU1 (uncharacterized protein LOC111015187 OS=Momordica charantia OX=3673 GN=LOC111015187 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 90/158 (56.96%), Postives = 100/158 (63.29%), Query Frame = 0


Query: 1   MCYFFTGLVDETLTVKLGEEVSSTFAEVLQKTKMVID----------------------- 60
           MCYF TGL DETLTVKLG+E  +TFAEVLQK K VID                       
Sbjct: 1   MCYFLTGLADETLTVKLGDEAPATFAEVLQKAKKVIDGQELLRTKTGRLKKQIDQKKLSQ 60

Query: 61  --RRSDSDS---------------------SRRRPYERYTPTTIPISEILTNIEETGLEK 113
             R+SDS S                     +R RPYERYTPTTIPISEILTNIEE+G+EK
Sbjct: 61  EKRKSDSKSKDNGSSFSGSRTEYHRSEIGFNRSRPYERYTPTTIPISEILTNIEESGMEK 120

The following BLAST results are available for this feature:

BLAST of Moc06g17040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159160.1	6.0e-44	83.04	uncharacterized protein LOC111025585 [Momordica charantia]	[more]
XP_022154446.1	1.1e-42	72.87	uncharacterized protein LOC111021718 [Momordica charantia]	[more]
XP_022159079.1	7.6e-39	58.86	uncharacterized protein LOC111025521 [Momordica charantia]	[more]
XP_022156638.1	2.9e-38	70.08	uncharacterized protein LOC111023488 [Momordica charantia]	[more]
XP_022145827.1	7.1e-37	56.96	uncharacterized protein LOC111015187 [Momordica charantia]	[more]

BLAST of Moc06g17040 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g17040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXW4	2.9e-44	83.04	uncharacterized protein LOC111025585 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DNR4	5.5e-43	72.87	uncharacterized protein LOC111021718 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1E1B3	3.7e-39	58.86	uncharacterized protein LOC111025521 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DR60	1.4e-38	70.08	uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CXU1	3.4e-37	56.96	uncharacterized protein LOC111015187 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of Moc06g17040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g17040.1	Moc06g17040.1	mRNA