Moc06g16920 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g16920
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S ribosomal protein L35a-1-like
Locationchr6: 13300324 .. 13307513 (-)
RNA-Seq ExpressionMoc06g16920
SyntenyMoc06g16920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATTGATGTGGTGGCTAGGTCTAAATCCAACCAGTACCCGAACACTTCATTACTCCAGATCAAGGGTGTTAATTCCAAGGATGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGTAAGGTCGCTGGGCCTCACGGTAACAGTGGCATTGTTAGAGCGAAGTTCATGTCTAATCTACCGCCAAAGTCCATGTTATGGTGAAAAATAAAGCTATTTAATGTGTTGTAAATGGAGACCCCTCTATCTTGGTTCTTTACATTTTGGTAACTTCTCTACAGGGTGATAGGGTCAGAGTATTCATGTACCCCAACAACATTTAAGGTAACTAGCTTATTTCGTTGCTTAGTAGATTTATCTTTTACGGTCTTTCTCTTTATCTTTTTACACCTGGTATGTTCTGATGCTTCTTATTATGGTTTCTGTCTTTTATGAGTGGGAAGCTCATGATTTGCTGGGCGAATGTGTTCGACCAGCACGTGAACAGTAGATTTGTGAGCAATGTGTGGAAGGTTGGTCTGGATATGAAGGATGTGTGCGACAGAGCAACTGTGGCGAAGATGGTGAATGATTTAATGGTGAATAAAAGAGAGGAGTTCGTGAGGTCTGCTGCTGAGATTGCTAATTTTGCAATGCGAAGTGTGAGCGCAGGTGGATCATCATACGCTTATTTTGGACGTCTGGTCAAGGATATTAGATTGCTAAGTCAACAGACAACACTAGAGAAACATTAACGATGATGTCAAATTTTATTTCAAATATGAAGGGTTGAAAATGTTGGAAAAAATTTTAAAAACCCATATGTTAGAATTTAAGCTAGATTCATTTCTATATACATACATGAATTCCTAGATACATGAATTGTTAGGTTTATGTAAGATAATGTATTAAGATACATGAATAGTATGTATACATGTATCTATTTATTTTGTGTCTTTTAGATGTGTCTCTTGGATGTTACATAAAGGGATCATTTCCTTCATTTGTAATCAAGCAAGAAAGAAGCTAATCGAAGCATTTCAATCAAGAAAGAAAAGAGAACAATATTCTTCTCTTGTATGTTATTGAGTTTAATAAGAGAACAAATTTCTTCTCTTTAAAGTTGGTGAGTTTTAGAGTGAATTCTAGTGAGGGCTTATCAACGTTTCCAACAAAGTGGTATCAGAGCCAAGTTCAAAAGATGTCATCCAACAACATGTTGCAGCCTCAACTTTCTCATTTTGAAGGAAAGAACTATAGATGGTGGAGTCAACAAATGAAGGTTCTTTATAGATCTCAAGAGCTTTGGGATATTGTTGATAGAGGATATTCGGAGCCAGAAGGTGAAGATGGTCTTTCACAAGAACAACTCAACGAGTTGAGAGATGCTAGAAAGAAAGACAAAAAAGCGTTGTTTTTTATCTACCAAGCTGTAGATAAAATATCTTTGAAAGAATTTCAGGAGTCTCAACTGCTAAAGCAGCATGGGATGAATTGCAAAGTTTATATAAAGGAGAGGAAAAGGTAAAAATGGTAAGATTGCAAGCACTTGAAAGAAGTTGAAACTGTTGAAGAATTTTTCAATCATGTTCTCTCTATTATTAATCAATTGAGATCAAAGAGTGGTAGAAAAGATCCTTCGAAGCATGACCAGAAGATATGAGCACATTGTAGTAGCAATTGAAGAGTCTAAAGATTTGTCAACACTCTCCATATATAGCTTGATGGGATCTCTCCAATCTCATGAGCTTAGATTGAAGCAATTTGATTTTACTCTTTCAGAAGAAGCTTTTCATATGCAAACTTCTTCTAGAGGGAGATTTAATGAAAGAAGAGGTGGTCGCAGTGGTCGAGGAAATGGAAGGTCTAATGACTTCAAAAGTTTTGAGTCAGAGAGAAGAGATAATCAAACTTCTTCAAATAGAGGAAAGAGAAGAAATTCCAGTAGAGGAAGAAGTAGAGGTGGAGGTCATGGAGATTTTTCTCACATACAATGCTTCAATTGTAGACGCTACGGGCACTTTCAAGCAGACTATTAGTCTAAAAAGACCAATTCTAATAAGGCAGAGACCACTCTGATGCATGAACAACAAAATGATGATCAAAGCCTTTTTTTTCCTCACATTTAATGTCCAAGAAACAAGTACCGAAGATATATGGTACCTTGATAGTGGTTGCAATAACCACATGACCTTTTCGTAACTATGGGTGAATCTCTTCAAAATGAAGTGAAGACAGGTGACAACAAGAAACTCACAGTCAATGGAAAAGGAGATATTATCGTGAAGACAAAGAATGGAGCAAAAAGAATCGTTGATGTGTATTACGTTCCAGGACTCAAACACAATCTTTTAAGTGTTGGTCAACTTCTATTGAAGGGACATGATGTTGTCTTCAAAGATAGCATATGCGAGATTAGAGCTAAGAATGAAAGTCTCATAACAAAGGTACACATGACTCACAACAAAATGTTTCCAATCAAAATGTTTTATGAGAAGCTTCTTTGTTTTGAGACTTTAGTAAAAGACTCTTCATGGCTTTGGCATTATCGATATGGGCACCTGAGTTTTGACACTTTGTCTAACATGTGTCAACAACATATGGTGAGAGGAATGCCAAATATTAAAAGGGAAGATCAACTTTGTGAAGCATGTATTTTGGGAAAGCATCATCGAAATCCATTTTCGACAGGAAGTTCTTGAAGAGCATCAAAACCTCTCGAGCTAGTCCATACAGACTTATGTGGACCCATGCGAACTACTACGCTTGGAGGTAATCGTTATTTTCTCACATTTATTGATGACTATAGTCAGAAGACATGGATTTACCTGTTAAAAGAAAAAAGTTATACTTTCGAGTAAAACATTCAAGGCAATGGTGGAAAATGAAAGCAACTTAAAATTGAAGATGTTGCGTTCTGATTGTTTATGGATAATATATTACTTTTGAAGATTTTTTTGAAGGAAAATGGAATAAAGTATCAAAAGACTGTTCGAAGAACTCCTCAACAAAATGGTGTTGTAGAGAGAAAAAACAGAACAATAATGGAGCTTGCAAGAAGTATGTTGAAGGCCAAGAATCTTCCAAATGAATTTTGGGGAGATGTAGTGACATGTGCTATTTGTCTCTTGAATCGTGCTTCAACCAAAAGTGTTCAAGGCCTTACTCCTCAAGAAACATGGAGTGGATTAAAGCCAACTGTTAGTCACCTAAGAGTATTTGGCTGCATTGCTTATTCTCATATTTCAAATGAGAAAAGAGGTAAGCTCGATGATAAATCAGAAAAATGCATTTTTGTTGAGTATAGTGAGAACTTCAATGCTTATAGATTATTCAATCCTATAAGCAAGAAAATCATTATCAGCCGAGATGTAAAATTTAGTGAAGCAGAATTTTGGAGATGAGATGCAACAAATGGAAACCATAATCCATTACTTGTTGACATGAATGACAAAGGAGATGCTCAAGACTTGGAGCTTGAAGAGACTCGACCAGCAGCTTCATCTTCATCTCTACCTTCCACAAGTGATGAATCAACTCCACCAAGGAAGATGAGAAATATTCAAGAGATCTATAATGCTTCAAGAAGAATACCTGAAGATGAACATGTTGATTTTGCTTTATTTGCAGATGTTGATCCTATATACTTTGAGGAGGCAATTCAAGATGAAAAATGGAAGGTTGCAATGGATCAAGAGATCGATGCAATAAGAAGAAATGAGACATGGGAGTTAGTCAATCTACAGGAAAATAGATAAGCTCTTGGAGTCAAATGGGTCTACCGGACGAAGCTGAAGCAAAATGGCGAAGTTGAGAAATATAAGGCAAGACTTGTCATTAAAGGGTACAAGCAAAAGTATGGTGTGGATTATGAAGAAATTTTTGCACCTGTGACCCGTTTGGAGACTGTTTGATTGATTCTAGCTCTTGCAGCACAAAATGACTGGAAAGTACATCAAATGGATGTCAAGTCAGCTTTTCTAAATAGGTACTTGGAGAAAGAGATATATATTGAGCAACCTCCTGGTTTTGTACAGAATGGAGACGAGGACAAGGTATGTCGATTGAAGAAAGCATTGTACGGGTTAAAGCAAGCACCAAGAGCCTAATACAATCGTATTGATAGTTTCTTCCTGAAGAATGATTTCAAAAGATGTCCATATGAACATGTTCTCTACACCAAAGAGGACAAGAATGGTAATTTCTTGATCATTTGTCTATAAGTTGATGATTTGATATTTTTAGGAACTTCAACAATGATGCTTGAAGAGTTCAAAGTGAGCATGAAGAAAGAATTTGAGATGACTGATATGGGCTTGCTTCATTACTTTCTTGGTATCGAAGTAAAGCAAAGTGATACTGGGATTAATATTTCCCAAAAGAAGTATGCGAAGGATTTGTTGTTCAAGGTCAAAATGGAGAATGCTGATAAGAAAATGGACCTAACAAGTGTTCATAATACTTTAATAAATGATATTCAACTCATTCAAAAGATTTGGAATGAATGACCCATGATCTCAATGGGTTGGTGAAATCTCGGTCGAGTTTTTTGACTCATGGATGGGTCCCACAATAGAAAGCCGCATTTTTTTTACTTTTCTTGGTCAAATGCCGACGACCGACAGGTGAAGAGGGGTCTAAATACGAAGGTTATGTGAGATTAAGTTAACTCTAGGTTAAAATATTATTGTAGTTTTCATTTTGAGCTTTGGCTTATTTTTGTTTCTATACTTTTGTAATGTTCATTTTAGTATCTGTATTTTCAAACTTTAGTTTACATTAGTTTTTGTTCTTTTAATATATTCGATTTGATCCGTGTACATTTAAAAATAGACCATTTTGATCTTTGTTTTCGAAATTTTAACACAAATTATACACATAATAGAAATCTTTCAATATAGAGTCATCGTTACATTTCAAAAAATATATCGAGTGTAGTGTCATGTTGAAATTGTGATAGAAAAATGAAATAAAAATAAATTTTAAAGGATTAAAATAGTCACTTTTAAAAGTACAGGTAATAAAACGAACATTTTGATAAAGTATAAAGAGTTAAATGAACAAAAACAAGTCTAAAAGTACAAGGATCCAAAATAGTATTTTAACCTTAATTATAGTTTCATATTTACCTATTTTCCCTCTCATCTTTCTCTCTCATTGAATGGTAGTAAATAAGTTGTACAATAATGAAACTGTGTCAAAAAAGAAAAATATTTGCTCCACACGTGAGGCCAACATATATGTTTGGTAGCCATTTTTTGTTTTTTGTTTTTGAAAAATAGAAAACCAAAATTTTTTGATAATCTTTTTAGTTTTTTGTTTTTAAAAGGTTAGAAAATTGAAAATAAGAAAGAAAAATCTATGTAGAGTAGAGATAACAATGGTGTGGGTGCGAGTGAGGATGCTATCCTCCATTCTCGTGCCCATGAAAATTTTTAATCCCCGTCTCTACCTCGTTTTTCAATCTGAGAGATGTTCTTGAGAAAAATTATTAGTTTTATTAATTGTTTTAATTATTTTTAGATTTAAAAAAACGTAATAAATATATATTAATTATTTAAAAATGGAATGGGGGATCGGGTTGAGACATGCATTTTCTATTTTTGGGACCAGACTCTGCGGAAAAGAAAAGTTATGGTGGAAAAAAATTTAGAGATAAAAACAAGATTCAAAATATAATTTTTAGAGAAAATAAATAAATAAAGAAATAAATAAAAGTTAAAAAAAGAAGATGGAAAAATATTAAATTTTAGAGCGACAAAGATATTCTTTAGAGATAAATATGAGAAATAAAAAAAAAAGTTTAGTATTAAAAAAAAAAATTCATATTTTGAAAAAACAGAAATTTGTTTGTTGAAAACTAATTTTGTTTTTGTTTTTGAAATTTACATAGAACTACAAATTGATTTTTGAAAAATATAGAAAATTAAATTGATTATCAAACAACTTGATTTTTAATAAAAACCAAAAACCAAATATATATTAACTAATAAGAGAGTAGTTTAGATATTATAAAAAATGAACGATAATATTGTAAAAAAAAAATCTTACTTTTATATATATTATATAATAAGTAATCGGTGTTAATTATAAAACAGTTTAAGATAATTTATAATATATTTTTTTTGGCCAAAGAGCCAAGAGGTTGTCACACCTCCCTAGGTTGTAATAAAAACAAATTATAAATATATATTTTTGAAAACGCTATGTTTGTATAGGGTAAAAGATACTTTTAGTCCCTCGATTTGACAATAAGTTTCTATTTAATCCATAAGTTTCAAAAGGTGACAATTTAGTCCCTTGATTTTTAGAAAATAGTTATAAAAGATCTATGGAGTCAAACTTTACTAGTAGAATGTTGACGTGGCACTACTGATTATTTTTTGGGGTGCATGTGTTCTTACAACTTGTTTTTTGATAAATCGAACTCTTTCTCTTGTTTTTGGTTGGGATACTCCTTTTCATCGATTGTATGGGAACCTGCTTATTATTCTTCTTTGAAAATGTTTGGGTGTTTATGTTTTGCATCTACTTCTTCTCCTATTAATCGTTCCAAGTTTCATCCTCGTGCTCTTCCTTCGGTTTTTGTTGGCTATCCACCAGGGATGACAGGTTACAAGCTTTATGATATTGAGCATAAGCGATTTTTCATATCACGGAATGTTGTCTTTCATGAGAATTATTTCCCGTTTCATACAATTTCTTCTCAGCCTACCGAGGTTGATGATTTTTCTGAGAGTTCTTCTACTATACCGTATGATGACCTTTTGAATGAGGATGTTCATGCTGATATTTCTAGTTCTTCTTCTATTGAACATGTCCATGCTGTTATTGAACATCATGTTGTTTTTTAGCCTTCCATTCAACCCTTTGCTCTTGTTGTTGAGGCTACAACCACTGAGCTTCCTGTTACTGAGGACAATTCTCCTATTGAGTATGTTACTCTTGTTCTGCCTACACAAATTGCTGATGTTCCTGTTGTTTCTGTTGATCAACCTCTTGTTGTTTCAGACATTGCTGGTCCATTTGCTGGGCAACACCTGCAACTTGTTTGCAGGTCATCTAGGCCTACACAGAGGCCATCTTATCTTCATGACTACCATTGTAGTCTCGATCACAATTCTCCAGCCAGTAGCTCTTTATGTTATCCTTAG

mRNA sequence

ATGATGATTGATGTGGTGGCTAGGTCTAAATCCAACCAGTACCCGAACACTTCATTACTCCAGATCAAGGGTGTTAATTCCAAGGATGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGTAAGGTCGCTGGGCCTCACGGTAACAGTGGCATTGTTAGAGCGAAGTTCATGTCTAATCTACCGCCAAAGTCCATGTTATGGGTGATAGGGTCAGAGTATTCATGTACCCCAACAACATTTAAGCTCATGATTTGCTGGGCGAATGTGTTCGACCAGCACGTGAACAGTAGATTTGTGAGCAATGTGTGGAAGGTTGGTCTGGATATGAAGGATGTGTGCGACAGAGCAACTGTGGCGAAGATGGTGAATGATTTAATGGTGAATAAAAGAGAGGAGTTCGTGAGGTCTGCTGCTGAGATTGCTAATTTTGCAATGCGAAGTGTGAGCGCAGGTGGATCATCATACGCTTATTTTGGACGTCTGAAGAAGCTTTTCATATGCAAACTTCTTCTAGAGGGAGATTTAATGAAAGAAGAGGTGGTCGCAGTGGTCGAGGAAATGGAAGGTCTAATGACTTCAAAAGTTTTGAGTCAGAGAGAAGAGATAATCAAACTTCTTCAAATAGAGGAAAGAGAAGAAATTCCAGTAGAGGAAGAAGTAGAGGTGGAGGTCATGGAGATTTTTCTCACATACAATGCTTCAATTCCTTCCATTCAACCCTTTGCTCTTGTTGTTGAGGCTACAACCACTGAGCTTCCTGTTACTGAGGACAATTCTCCTATTGAGTATGTTACTCTTGTTCTGCCTACACAAATTGCTGATGTTCCTGTTGTTTCTGTTGATCAACCTCTTGTTGTTTCAGACATTGCTGGTCCATTTGCTGGGCAACACCTGCAACTTGTTTGCAGGTCATCTAGGCCTACACAGAGGCCATCTTATCTTCATGACTACCATTGTAGTCTCGATCACAATTCTCCAGCCAGTAGCTCTTTATGTTATCCTTAG

Coding sequence (CDS)

ATGATGATTGATGTGGTGGCTAGGTCTAAATCCAACCAGTACCCGAACACTTCATTACTCCAGATCAAGGGTGTTAATTCCAAGGATGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGTAAGGTCGCTGGGCCTCACGGTAACAGTGGCATTGTTAGAGCGAAGTTCATGTCTAATCTACCGCCAAAGTCCATGTTATGGGTGATAGGGTCAGAGTATTCATGTACCCCAACAACATTTAAGCTCATGATTTGCTGGGCGAATGTGTTCGACCAGCACGTGAACAGTAGATTTGTGAGCAATGTGTGGAAGGTTGGTCTGGATATGAAGGATGTGTGCGACAGAGCAACTGTGGCGAAGATGGTGAATGATTTAATGGTGAATAAAAGAGAGGAGTTCGTGAGGTCTGCTGCTGAGATTGCTAATTTTGCAATGCGAAGTGTGAGCGCAGGTGGATCATCATACGCTTATTTTGGACGTCTGAAGAAGCTTTTCATATGCAAACTTCTTCTAGAGGGAGATTTAATGAAAGAAGAGGTGGTCGCAGTGGTCGAGGAAATGGAAGGTCTAATGACTTCAAAAGTTTTGAGTCAGAGAGAAGAGATAATCAAACTTCTTCAAATAGAGGAAAGAGAAGAAATTCCAGTAGAGGAAGAAGTAGAGGTGGAGGTCATGGAGATTTTTCTCACATACAATGCTTCAATTCCTTCCATTCAACCCTTTGCTCTTGTTGTTGAGGCTACAACCACTGAGCTTCCTGTTACTGAGGACAATTCTCCTATTGAGTATGTTACTCTTGTTCTGCCTACACAAATTGCTGATGTTCCTGTTGTTTCTGTTGATCAACCTCTTGTTGTTTCAGACATTGCTGGTCCATTTGCTGGGCAACACCTGCAACTTGTTTGCAGGTCATCTAGGCCTACACAGAGGCCATCTTATCTTCATGACTACCATTGTAGTCTCGATCACAATTCTCCAGCCAGTAGCTCTTTATGTTATCCTTAG

Protein sequence

MMIDVVARSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGNSGIVRAKFMSNLPPKSMLWVIGSEYSCTPTTFKLMICWANVFDQHVNSRFVSNVWKVGLDMKDVCDRATVAKMVNDLMVNKREEFVRSAAEIANFAMRSVSAGGSSYAYFGRLKKLFICKLLLEGDLMKEEVVAVVEEMEGLMTSKVLSQREEIIKLLQIEEREEIPVEEEVEVEVMEIFLTYNASIPSIQPFALVVEATTTELPVTEDNSPIEYVTLVLPTQIADVPVVSVDQPLVVSDIAGPFAGQHLQLVCRSSRPTQRPSYLHDYHCSLDHNSPASSSLCYP
Homology
[Close]
BLAST of Moc06g16920 vs. NCBI nr
Match: XP_022139236.1 (60S ribosomal protein L35a-1-like [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 5.8e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN
Sbjct: 23  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 82

Query: 68  SGIVRAKFMSNLPPKSML 86
           SGIVRAKFMSNLPPKSML
Sbjct: 83  SGIVRAKFMSNLPPKSML 100

[Close]
BLAST of Moc06g16920 vs. NCBI nr
Match: XP_039067467.1 (60S ribosomal protein L35a-1-like [Hibiscus syriacus] >KAE8718082.1 60S ribosomal protein L35a-3 [Hibiscus syriacus])

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-35
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSL+QI+GVN+K+EV+WY GKR+AYIYKAKVKKNG+ YRCIWGKVA PHGN
Sbjct: 23  RSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKVKKNGSQYRCIWGKVARPHGN 82

Query: 68  SGIVRAKFMSNLPPKSMLWVIGSEYSCTPTTFKLMI 104
           SG+VRAKF SNLPPKS  W I SE SCTP TF+L I
Sbjct: 83  SGVVRAKFKSNLPPKS--WEIESESSCTPATFELSI 116

[Close]
BLAST of Moc06g16920 vs. NCBI nr
Match: KHG28839.1 (60S ribosomal L35a-3 -like protein [Gossypium arboreum])

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-35
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSL+QI+GVN+K+EV+WY GKR+AYIYKAKVKKNG+HYRCIWGKV  PHGN
Sbjct: 23  RSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGN 82

Query: 68  SGIVRAKFMSNLPPKSMLWV-IGSEYSCTPTTFKL 102
           SG+VRAKF SNLPPKSM+ V I SE SCTP TF+L
Sbjct: 83  SGVVRAKFKSNLPPKSMVSVEIESESSCTPATFEL 117

[Close]
BLAST of Moc06g16920 vs. NCBI nr
Match: TXG49869.1 (hypothetical protein EZV62_025744 [Acer yangbiense])

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-35
Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSL+QI+GVN+K+EV+WY GKR+AYIYKAKVKKNG+HYRCIWGKVA PHGN
Sbjct: 11  RSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGN 70

Query: 68  SGIVRAKFMSNLPPKSMLWVIGSEYSCTPTTFKL 102
           SG+VRAKF SNLPPKSM+ V G   SCTP   K+
Sbjct: 71  SGVVRAKFKSNLPPKSMVLVTGLGSSCTPAISKI 104

[Close]
BLAST of Moc06g16920 vs. NCBI nr
Match: XP_022139205.1 (60S ribosomal protein L35a-1-like [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-34
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSLLQI+GVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVA PHGN
Sbjct: 23 RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGN 82

Query: 68 SGIVRAKFMSNLPPKSM 85
          SGIVRAKF SNLPPKSM
Sbjct: 83 SGIVRAKFKSNLPPKSM 99

[Close]
BLAST of Moc06g16920 vs. ExPASy Swiss-Prot
Match: Q9LMK0 (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.1e-33
Identity = 63/77 (81.82%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+Q++GVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 23 RSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VRAKF SNLPPKSM
Sbjct: 83 SGVVRAKFTSNLPPKSM 99

[Close]
BLAST of Moc06g16920 vs. ExPASy Swiss-Prot
Match: Q9FZH0 (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.1e-33
Identity = 63/77 (81.82%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+QI+GVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 22 RSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VR+KF SNLPPKSM
Sbjct: 82 SGVVRSKFTSNLPPKSM 98

[Close]
BLAST of Moc06g16920 vs. ExPASy Swiss-Prot
Match: Q9C912 (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.1e-33
Identity = 63/77 (81.82%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+QI+GVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 23 RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VRAKF SNLPPKSM
Sbjct: 83 SGVVRAKFTSNLPPKSM 99

[Close]
BLAST of Moc06g16920 vs. ExPASy Swiss-Prot
Match: P51422 (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 5.3e-33
Identity = 63/77 (81.82%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+QI+GVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 22 RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VR+KF SNLPPKSM
Sbjct: 82 SGVVRSKFTSNLPPKSM 98

[Close]
BLAST of Moc06g16920 vs. ExPASy Swiss-Prot
Match: U5NH37 (7-deoxyloganetic acid glucosyl transferase OS=Catharanthus roseus OX=4058 GN=7DLGT PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-17
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 0 

Query: 102 MICWANVFDQHVNSRFVSNVWKVGLDMKDVCDRATVAKMVNDLMVNKREEFVRSAAEIAN 161
           MICW    DQ +NSRFVS +WK+GLDMKD CDR T+ KMV +LM  +++EF++ A  +A 
Sbjct: 395 MICWPYFADQMINSRFVSEIWKIGLDMKDTCDRETIVKMVRELMEIRKDEFLQRADHMAK 454

Query: 162 FAMRSVSAGGSSYA 176
            A  +VS GGSSY+
Sbjct: 455 LAKEAVSEGGSSYS 468

[Close]
BLAST of Moc06g16920 vs. ExPASy TrEMBL
Match: A0A6J1CC32 (60S ribosomal protein L35a-1-like OS=Momordica charantia OX=3673 GN=LOC111010197 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN
Sbjct: 23  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 82

Query: 68  SGIVRAKFMSNLPPKSML 86
           SGIVRAKFMSNLPPKSML
Sbjct: 83  SGIVRAKFMSNLPPKSML 100

[Close]
BLAST of Moc06g16920 vs. ExPASy TrEMBL
Match: A0A6A3BSW1 (60S ribosomal protein L35a-3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110020pilonHSYRG00553 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.3e-36
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSL+QI+GVN+K+EV+WY GKR+AYIYKAKVKKNG+ YRCIWGKVA PHGN
Sbjct: 23  RSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKVKKNGSQYRCIWGKVARPHGN 82

Query: 68  SGIVRAKFMSNLPPKSMLWVIGSEYSCTPTTFKLMI 104
           SG+VRAKF SNLPPKS  W I SE SCTP TF+L I
Sbjct: 83  SGVVRAKFKSNLPPKS--WEIESESSCTPATFELSI 116

[Close]
BLAST of Moc06g16920 vs. ExPASy TrEMBL
Match: A0A0B0PWN4 (60S ribosomal L35a-3-like protein OS=Gossypium arboreum OX=29729 GN=F383_10337 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.3e-36
Identity = 76/95 (80.00%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSL+QI+GVN+K+EV+WY GKR+AYIYKAKVKKNG+HYRCIWGKV  PHGN
Sbjct: 23  RSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGN 82

Query: 68  SGIVRAKFMSNLPPKSMLWV-IGSEYSCTPTTFKL 102
           SG+VRAKF SNLPPKSM+ V I SE SCTP TF+L
Sbjct: 83  SGVVRAKFKSNLPPKSMVSVEIESESSCTPATFEL 117

[Close]
BLAST of Moc06g16920 vs. ExPASy TrEMBL
Match: A0A5C7GZA7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_025744 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-35
Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 8   RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
           RSKSNQYPNTSL+QI+GVN+K+EV+WY GKR+AYIYKAKVKKNG+HYRCIWGKVA PHGN
Sbjct: 11  RSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGN 70

Query: 68  SGIVRAKFMSNLPPKSMLWVIGSEYSCTPTTFKL 102
           SG+VRAKF SNLPPKSM+ V G   SCTP   K+
Sbjct: 71  SGVVRAKFKSNLPPKSMVLVTGLGSSCTPAISKI 104

[Close]
BLAST of Moc06g16920 vs. ExPASy TrEMBL
Match: A0A6J1CBN5 (60S ribosomal protein L35a-1-like OS=Momordica charantia OX=3673 GN=LOC111010174 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-34
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSLLQI+GVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVA PHGN
Sbjct: 23 RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGN 82

Query: 68 SGIVRAKFMSNLPPKSM 85
          SGIVRAKF SNLPPKSM
Sbjct: 83 SGIVRAKFKSNLPPKSM 99

[Close]
BLAST of Moc06g16920 vs. TAIR 10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-34
Identity = 63/77 (81.82%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+QI+GVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 22 RSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VR+KF SNLPPKSM
Sbjct: 82 SGVVRSKFTSNLPPKSM 98

[Close]
BLAST of Moc06g16920 vs. TAIR 10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-34
Identity = 63/77 (81.82%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+Q++GVN+ +EVSWY+GKR+AYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 23 RSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VRAKF SNLPPKSM
Sbjct: 83 SGVVRAKFTSNLPPKSM 99

[Close]
BLAST of Moc06g16920 vs. TAIR 10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-34
Identity = 63/77 (81.82%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+QI+GVN+++EV+WY+GKR+AYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 23 RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGN 82

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VRAKF SNLPPKSM
Sbjct: 83 SGVVRAKFTSNLPPKSM 99

[Close]
BLAST of Moc06g16920 vs. TAIR 10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.8e-34
Identity = 63/77 (81.82%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 8  RSKSNQYPNTSLLQIKGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVAGPHGN 67
          RSKSNQYPNTSL+QI+GVN+++EV+WY+GKRLAYIYKAK KKNG+HYRCIWGKV  PHGN
Sbjct: 22 RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGN 81

Query: 68 SGIVRAKFMSNLPPKSM 85
          SG+VR+KF SNLPPKSM
Sbjct: 82 SGVVRSKFTSNLPPKSM 98

[Close]
BLAST of Moc06g16920 vs. TAIR 10
Match: AT5G05870.1 (UDP-glucosyl transferase 76C1 )

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-07
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0 

Query: 102 MICWANVFDQHVNSRFVSNVWKVGLDMKDVCDRATVAKMVNDLMVNKREEFVRSAAEI-A 161
           MIC    +DQ VN+RF+S VW+VG+ ++   +R  + + V  LMV  + E +R   ++  
Sbjct: 371 MICLPCKWDQFVNARFISEVWRVGIHLEGRIERREIERAVIRLMVESKGEEIRGRIKVLR 430

Query: 162 NFAMRSVSAGGSSY 175
           +   RSV  GGSSY
Sbjct: 431 DEVRRSVKQGGSSY 444

The following BLAST results are available for this feature:
BLAST of Moc06g16920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022139236.15.8e-37100.0060S ribosomal protein L35a-1-like [Momordica charantia][more]
XP_039067467.11.1e-3579.1760S ribosomal protein L35a-1-like [Hibiscus syriacus] >KAE8718082.1 60S ribosoma... [more]
KHG28839.11.1e-3580.0060S ribosomal L35a-3 -like protein [Gossypium arboreum][more]
TXG49869.14.2e-3577.66hypothetical protein EZV62_025744 [Acer yangbiense][more]
XP_022139205.12.1e-3496.1060S ribosomal protein L35a-1-like [Momordica charantia][more]
BLAST of Moc06g16920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LMK04.1e-3381.8260S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=... [more]
Q9FZH04.1e-3381.8260S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=... [more]
Q9C9124.1e-3381.8260S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=... [more]
P514225.3e-3381.8260S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=... [more]
U5NH371.4e-1755.417-deoxyloganetic acid glucosyl transferase OS=Catharanthus roseus OX=4058 GN=7DL... [more]
BLAST of Moc06g16920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CC322.8e-37100.0060S ribosomal protein L35a-1-like OS=Momordica charantia OX=3673 GN=LOC111010197... [more]
A0A6A3BSW15.3e-3679.1760S ribosomal protein L35a-3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110020... [more]
A0A0B0PWN45.3e-3680.0060S ribosomal L35a-3-like protein OS=Gossypium arboreum OX=29729 GN=F383_10337 P... [more]
A0A5C7GZA72.0e-3577.66Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_025744 PE=3 SV=1[more]
A0A6J1CBN51.0e-3496.1060S ribosomal protein L35a-1-like OS=Momordica charantia OX=3673 GN=LOC111010174... [more]
BLAST of Moc06g16920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G41880.12.9e-3481.82Ribosomal protein L35Ae family protein [more]
AT1G07070.12.9e-3481.82Ribosomal protein L35Ae family protein [more]
AT1G74270.12.9e-3481.82Ribosomal protein L35Ae family protein [more]
AT3G55750.13.8e-3481.82Ribosomal protein L35Ae family protein [more]
AT5G05870.12.3e-0739.19UDP-glucosyl transferase 76C1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000Glycogen Phosphorylase B;coord: 102..166
e-value: 8.1E-16
score: 60.5
NoneNo IPR availableGENE3D3.40.50.2000Glycogen Phosphorylase B;coord: 167..177
e-value: 8.1E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR10902:SF2060S RIBOSOMAL PROTEIN L35A-1coord: 7..84
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 102..177
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 8..84
e-value: 6.7E-31
score: 106.3
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 7..84
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190translation elongation factor selb, chain A, domain 4coord: 5..90
e-value: 1.4E-32
score: 113.8
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 8..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g16920.1Moc06g16920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome