Moc06g15690 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g15690
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr6: 12384260 .. 12385698 (+)
RNA-Seq Expression	Moc06g15690
Synteny	Moc06g15690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGACAGTACACACGACCGGCGGTTATGTGTCTTTTCTCATATCGGACCTGTCGGGTTCCGAGCAGGTCGGACCCCAGTCAGGTCGAACCTTGGTGCCGATACTTAGTCTTTTATAACGGGCGAACCCGACCACCTCAGCGGGGTCGAGGTGGACCTAAGCAGTCCTTTTTATTTGGTTTCTTCAAACACTAATAAGGGTCCTCCACGTGTCTCGGGTACGTTTACTCCCAAACAGAACTCATGACCTCTATGTTAGAGATAGGTGTCTTAACCACTTGAGCTATGTTTGGTCTGGCTATGATGGTGTTTTACTGTTTACTATTTTTAATTTTGTTACCCACGATTCTACTTTAGTTATTAGTGGGGTTGGTTTATTTATGTGATCTTTACTTTCCTCAATTGAGGTTAGTTGGTTGTTATCCTTATGCAATTGTAACAAGTGTTTTGTATAAATACCCTTTGCAGAGGTTAATAAAGATTATGTTTTTTCCTCTATGAAACAGAAGTTGTGGCTAAAATTCTAAAATTCAAAGTTTGTATCAGAGCTTAGACATAGGCGCTGCTATGGCTATTGACAAAGTTGGAAGTTCTTCTTCACTTTCTTAAGTTACTACAAATGTTGTTCTTGCCGTGACCAACATTTCTCAGTTGAATTGGTCATCCTTTGGGGACTGCTTTGACAGTCAAATTGGATGATAAAAACTACTCCCTGTAGAGAGGGATGATACTTGCAGTTGAGGGCAGAAGGTTGAAAGCGCATTATAGCGAAGCCTACACAATTCATAATTCCTGCAAACAACAAGGGAGCCTTCAACGTTTCTCCAAATAGTGCAAACAGTAGCCACAACTCTGCATATATTACTATACCAGAAGTTGTCATTGAACCTGCTTGGCTGGCTGGCAATGGAGCCACTGATCATGATGTCACTTCAGGGTTGAGCAACCTACTGGTAAAGGTGTGTTAACAGTTGGCAATGATAATAAATTAAAAATTTCACATGTTGGACATAGTTATTTGCAAACATGTTCAACCACTCCTCGCAAACTTATTCTTAAAAACATCCTCCATGGTCCAAAAGTGAAAAGAAATATTTTTACTATTGCTACAATGATTGCCGATAACAACTGTTACGTTGAATTTTATCCTAAATTTTGTTTTGTGAAGGACAAGGTAACAAAGAGGGTTGTGCTACATGGAGTTCTTAAGGATGGACTGTATCGACTGAACTTGTCATTTCACAACATCAAGCAAGTCCACAAACCGCAACAACTCCAAGTTCAAAAGACTACAACCAACAATCAAGTTCATTTGAATTCCAATAATAGAGTCAGGTCTTCTTTCATTCAGTTTCATTTGAATTCCAGTGATAGGATTATGTCTTCATTCAATGTTAGTTCTTTTCCGTCCAGTAATGTGTTGTTTGATGTGTGA

mRNA sequence

ATGGATCCGACAGTACACACGACCGGCGGTTATGTGTCTTTTCTCATATCGGACCTGTCGGGTTCCGAGCAGGTCGGACCCCAGTCAGCGAAGCCTACACAATTCATAATTCCTGCAAACAACAAGGGAGCCTTCAACGTTTCTCCAAATAGTGCAAACAGTAGCCACAACTCTGCATATATTACTATACCAGAAGTTGTCATTGAACCTGCTTGGCTGGCTGGCAATGGAGCCACTGATCATGATGTCACTTCAGGGTTGAGCAACCTACTGGACAAGGTAACAAAGAGGGTTGTGCTACATGGAGTTCTTAAGGATGGACTGTATCGACTGAACTTGTCATTTCACAACATCAAGCAAGTCCACAAACCGCAACAACTCCAAGTTCAAAAGACTACAACCAACAATCAAGTTCATTTGAATTCCAATAATAGAGTCAGGTCTTCTTTCATTCAGTTTCATTTGAATTCCAGTGATAGGATTATGTCTTCATTCAATGTTAGTTCTTTTCCGTCCAGTAATGTGTTGTTTGATGTGTGA

Coding sequence (CDS)

ATGGATCCGACAGTACACACGACCGGCGGTTATGTGTCTTTTCTCATATCGGACCTGTCGGGTTCCGAGCAGGTCGGACCCCAGTCAGCGAAGCCTACACAATTCATAATTCCTGCAAACAACAAGGGAGCCTTCAACGTTTCTCCAAATAGTGCAAACAGTAGCCACAACTCTGCATATATTACTATACCAGAAGTTGTCATTGAACCTGCTTGGCTGGCTGGCAATGGAGCCACTGATCATGATGTCACTTCAGGGTTGAGCAACCTACTGGACAAGGTAACAAAGAGGGTTGTGCTACATGGAGTTCTTAAGGATGGACTGTATCGACTGAACTTGTCATTTCACAACATCAAGCAAGTCCACAAACCGCAACAACTCCAAGTTCAAAAGACTACAACCAACAATCAAGTTCATTTGAATTCCAATAATAGAGTCAGGTCTTCTTTCATTCAGTTTCATTTGAATTCCAGTGATAGGATTATGTCTTCATTCAATGTTAGTTCTTTTCCGTCCAGTAATGTGTTGTTTGATGTGTGA

Protein sequence

MDPTVHTTGGYVSFLISDLSGSEQVGPQSAKPTQFIIPANNKGAFNVSPNSANSSHNSAYITIPEVVIEPAWLAGNGATDHDVTSGLSNLLDKVTKRVVLHGVLKDGLYRLNLSFHNIKQVHKPQQLQVQKTTTNNQVHLNSNNRVRSSFIQFHLNSSDRIMSSFNVSSFPSSNVLFDV

Homology

[Close]

BLAST of Moc06g15690 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-04
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 50  NSANSSHNSAYITIPEVVIEPAWLAGNGATDHDVTSGLSNL 91
           +S+N++ NSAY+ IPE+V EP+WLA +GATDH VTS LSNL
Sbjct: 337 SSSNNNRNSAYMAIPEIVAEPSWLADSGATDH-VTSDLSNL 376

[Close]

BLAST of Moc06g15690 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-04
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 50  NSANSSHNSAYITIPEVVIEPAWLAGNGATDHDVTSGLSNL 91
           +S+N++ NSAY+ IPE+V EP+WLA +GATDH VTS LSNL
Sbjct: 337 SSSNNNRNSAYMAIPEIVAEPSWLADSGATDH-VTSDLSNL 376

[Close]

BLAST of Moc06g15690 vs. ExPASy TrEMBL
Match: A0A6J1DU77 (uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 7.2e-05
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 50  NSANSSHNSAYITIPEVVIEPAWLAGNGATDHDVTSGLSNL 91
           +S+N++ NSAY+ IPE+V EP+WLA +GATDH VTS LSNL
Sbjct: 337 SSSNNNRNSAYMAIPEIVAEPSWLADSGATDH-VTSDLSNL 376

[Close]

BLAST of Moc06g15690 vs. ExPASy TrEMBL
Match: A0A6J1DTZ7 (uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024384 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 7.2e-05
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 50  NSANSSHNSAYITIPEVVIEPAWLAGNGATDHDVTSGLSNL 91
           +S+N++ NSAY+ IPE+V EP+WLA +GATDH VTS LSNL
Sbjct: 337 SSSNNNRNSAYMAIPEIVAEPSWLADSGATDH-VTSDLSNL 376

The following BLAST results are available for this feature:

BLAST of Moc06g15690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157748.1	1.5e-04	65.85	uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]	[more]
XP_022157750.1	1.5e-04	65.85	uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]	[more]

BLAST of Moc06g15690 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g15690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU77	7.2e-05	65.85	uncharacterized protein LOC111024384 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DTZ7	7.2e-05	65.85	uncharacterized protein LOC111024384 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Moc06g15690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g15690.1	Moc06g15690.1	mRNA