Moc06g15640 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g15640
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Locationchr6: 12361733 .. 12363809 (-)
RNA-Seq ExpressionMoc06g15640
SyntenyMoc06g15640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGCATCTTACCCATAATGAGAGAATTTTAACTCTTACTGATGTTTCACGTCGTCTTGAACTGGAAGAAGACCGTATAGAGGCAACAAGGCCTTACAACGCAGCCTATGTGGCTGGTCGTGGTTCACATGGGAACAAAGGGCACAAACGTAAACATCAGGAAGGTTTTAAAGGGAAAGGAGATCACAAGAATAAGAAACCCAAGCAATATCAGAATGACAAGGATAAGGAGAAGCGTTCCATGGTTCGTCCTAAAAACAAGAAAGCAAATATCAAGTGCTACAATTGTCACCAAAATGGTCATTGCTCGTGAGTGTACTGAACCCAAGAAGGTACAAACTTTCAAAATGTTTAAGATTTGTTCTTTTACTTCTGAAAGTTGTGTTTCTAGCTTTGTCTTATTGACTGACTCTCATCCTTTGTGGACTGTAGACTCAAGAGTAACCGACCACGTAGCTAAAGATCGTGGGGTGTATGTGGAATTTCGTCGAATTTCATCAGGAGCTAAGTGGTTGTATGTAGGAAACAATGCCCGTGTGCCTGTAAAGGGCATTGGTTCCTACAAGTTGCACATGCGAAATGGACGCACTCTACTTCTGCATGATGTGTTGTATGCACCTGATATTCGGCGAAATTTGCTTTCTGTTACTGTCCTTCTCAAACTTGGTTACACTTTTACTTTGGCTGGAGACTTATTAACTCTGTCTTTGAACAACATACATTATGGTTATGATTTTCTTTTTAATGGTTTTATTGTACTAGATGTTGTTGAAACGATATCTTACAATTCTGCAAGTTTTTTCCTTATAACGTCATCTGTTGATGCTAATGTTGAAATGACTATGTGGCATGCTAGATTAGGTCATATAGGTCAACATAGAATGACTAGACTGGCTAGGGAAGGTTTATTAGGTCAATTTAACAAAATAGAATTACCTTTATGTGAAAGCTGTCTAGCGGGAAAAATGGCAAGAAAACCATTTGGTAAGGGAACTAAGGCTGAAACTCCATTGCAATTAATTCATTCTGATATTTGTGGACATATGAGTATAAAAGCTCGATATGGCAGTGAATATTTTATCACTTTTATAGATGATTTTACACGTTATGGTCAAGTTTATTTGATTTACCACAAGTCTGAAGCATTAGAATGTTTTAGAAAATTTTTAAACTTGGTGGAAAATCACTTAGATAAAAAGGTTAAGGTCTTAAGAATTGATCGACGACGTGAATATCTGTCTAATTAGTTTAGACAGCTATGTAACGAAAAAAGTATAGTAAGGCAGCTAACTACTCCTCGAACACCACAACAGAATGGAGTAGTTGAAAGAAGAAATAGAATTCTTCTTGAAATGGTTCGGTCAATGATGGCTCAAGCGAAATTGTCAATCACTTTTTGGGGTGATGCTCTATTAACCGCTGCTTATATCCTTAATCATGTGCCTTCCAAATCTGTTGCTTCCACACCCTATGAGTTATGGACTGGTAGAAAACCCGACCTTAGTGGTTTAAGGCCATGGGGTTGTGCTGCTTATGTACATGAGTCATCACATCCACATGGGAAATTAGGTCCAAGAGGTAAAAAGAGTATATTTATAAGATACTCGGAACACTCAAAAGGGTATGTATTTATTGGTGAACAAGAAACTGGGAGTATAATTGAATTTGAATCACGAGATGCTACTTTCTTGGAGAATGATTTTCTAAGGAGAGACGAGATCAGTGATGAGATATCCCTATTTGAAAATTATAATCAGAATGATTTGCTTTCATCAAATCCATCGTGGGATAGTCTCAGTACTGTACCAACAGTATCTCATCCAAGTGGGAGATATCTAAATACTACGTGTGATTTGGACGAACCACAAACCACTCGTGACTCAACCGATCAATTGTCAAGTGATTCAATGGAATCAACACGTGAGGCAGCTTATATACTTGGAGTCAAGATTGAAAGAGATCGCTCCAAAAGGATGTTACACAAGGCCAATACATCCAGAAAATTCTTGAAAGATTTAATATGCAAGACTGCAAACTCATTGATACTTCTATCGCAAAAGGTGAAAATTTGA

mRNA sequence

ATGAAGGTGCATCTTACCCATAATGAGAGAATTTTAACTCTTACTGATGTTTCACGTCGTCTTGAACTGGAAGAAGACCGTATAGAGGCAACAAGGCCTTACAACGCAGCCTATGTGGCTGGTCGTGGTTCACATGGGAACAAAGGGCACAAACGTAAACATCAGGAAGGTTTTAAAGGGAAAGGAGATCACAAGAATAAGAAACCCAAGCAATATCAGAATGACAAGGATAAGGAGAAGCGTTCCATGGTTCGTCCTAAAAACAAGAAAGCAAATATCAAGTGCTACAATTGTCACCAAAATGGTCATTGCTCCTTTGTCTTATTGACTGACTCTCATCCTTTGTGGACTGTAGACTCAAGAGTAACCGACCACGTAGCTAAAGATCGTGGGGTGTATGTGGAATTTCGTCGAATTTCATCAGGAGCTAAGTGGTTGTATGTAGGAAACAATGCCCGTGTGCCTGTAAAGGGCATTGGTTCCTACAAGTTGCACATGCGAAATGGACGCACTCTACTTCTGCATGATGTGTTGTATGCACCTGATATTCGGCGAAATTTGCTTTCTGTTACTGTCCTTCTCAAACTTGGTTACACTTTTACTTTGGCTGGAGACTTATTAACTCTGTCTTTGAACAACATACATTATGGTCCAAGAGGTAAAAAGAGTATATTTATAAGATACTCGGAACACTCAAAAGGGTATGTATTTATTGGTGAACAAGAAACTGGGAGTATAATTGAATTTGAATCACGAGATGCTACTTTCTTGGAGAATGATTTTCTAAGGAGAGACGAGATCAGTGATGAGATATCCCTATTTGAAAATTATAATCAGAATGATTTGCTTTCATCAAATCCATCGTGGGATAGTCTCAGTACTGTACCAACAGTATCTCATCCAAGTGGGAGATATCTAAATACTACGTGTGATTTGGACGAACCACAAACCACTCGTGACTCAACCGATCAATTGTCAAGTGATTCAATGGAATCAACACGTGAGGCAGCTTATATACTTGGAGTCAAGATTGAAAGAGATCGCTCCAAAAGGATGTTACACAAGGCCAATACATCCAGAAAATTCTTGAAAGATTTAATATGCAAGACTGCAAACTCATTGATACTTCTATCGCAAAAGGTGAAAATTTGA

Coding sequence (CDS)

ATGAAGGTGCATCTTACCCATAATGAGAGAATTTTAACTCTTACTGATGTTTCACGTCGTCTTGAACTGGAAGAAGACCGTATAGAGGCAACAAGGCCTTACAACGCAGCCTATGTGGCTGGTCGTGGTTCACATGGGAACAAAGGGCACAAACGTAAACATCAGGAAGGTTTTAAAGGGAAAGGAGATCACAAGAATAAGAAACCCAAGCAATATCAGAATGACAAGGATAAGGAGAAGCGTTCCATGGTTCGTCCTAAAAACAAGAAAGCAAATATCAAGTGCTACAATTGTCACCAAAATGGTCATTGCTCCTTTGTCTTATTGACTGACTCTCATCCTTTGTGGACTGTAGACTCAAGAGTAACCGACCACGTAGCTAAAGATCGTGGGGTGTATGTGGAATTTCGTCGAATTTCATCAGGAGCTAAGTGGTTGTATGTAGGAAACAATGCCCGTGTGCCTGTAAAGGGCATTGGTTCCTACAAGTTGCACATGCGAAATGGACGCACTCTACTTCTGCATGATGTGTTGTATGCACCTGATATTCGGCGAAATTTGCTTTCTGTTACTGTCCTTCTCAAACTTGGTTACACTTTTACTTTGGCTGGAGACTTATTAACTCTGTCTTTGAACAACATACATTATGGTCCAAGAGGTAAAAAGAGTATATTTATAAGATACTCGGAACACTCAAAAGGGTATGTATTTATTGGTGAACAAGAAACTGGGAGTATAATTGAATTTGAATCACGAGATGCTACTTTCTTGGAGAATGATTTTCTAAGGAGAGACGAGATCAGTGATGAGATATCCCTATTTGAAAATTATAATCAGAATGATTTGCTTTCATCAAATCCATCGTGGGATAGTCTCAGTACTGTACCAACAGTATCTCATCCAAGTGGGAGATATCTAAATACTACGTGTGATTTGGACGAACCACAAACCACTCGTGACTCAACCGATCAATTGTCAAGTGATTCAATGGAATCAACACGTGAGGCAGCTTATATACTTGGAGTCAAGATTGAAAGAGATCGCTCCAAAAGGATGTTACACAAGGCCAATACATCCAGAAAATTCTTGAAAGATTTAATATGCAAGACTGCAAACTCATTGATACTTCTATCGCAAAAGGTGAAAATTTGA

Protein sequence

MKVHLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKGKGDHKNKKPKQYQNDKDKEKRSMVRPKNKKANIKCYNCHQNGHCSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPVKGIGSYKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIHYGPRGKKSIFIRYSEHSKGYVFIGEQETGSIIEFESRDATFLENDFLRRDEISDEISLFENYNQNDLLSSNPSWDSLSTVPTVSHPSGRYLNTTCDLDEPQTTRDSTDQLSSDSMESTREAAYILGVKIERDRSKRMLHKANTSRKFLKDLICKTANSLILLSQKVKI
Homology
BLAST of Moc06g15640 vs. NCBI nr
Match: KAG7595359.1 (Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 223.0 bits (567), Expect = 4.4e-54
Identity = 154/428 (35.98%), Postives = 201/428 (46.96%), Query Frame = 0

Query: 1   MKVHLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAG-----RGSHGNKGHKRKHQ 60
           M+V +THN  + T  D+SR LELE++R+EA +P+N A VA      +   GNKG+K  +Q
Sbjct: 129 MRVQMTHNVNVKTFEDISRHLELEDERLEAAKPFNEANVASSISGLKRKRGNKGNKAPYQ 188

Query: 61  EGFKGKGDHKNKKPKQYQNDKDKEKRSMVRPKNKKANIKCYNCHQNGH------------ 120
            G K     +NK  K+ +    K+          K N+KCYNC   GH            
Sbjct: 189 TGLK----KQNKFAKRGKRGGKKD----------KTNVKCYNCGLLGHFARECTEAKKVS 248

Query: 121 ----------CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNAR 180
                      S V+L +SHPLW VDS  TDHVA+DR  +VE+RRI  G++WLYVGNN++
Sbjct: 249 LNSTCKYAYVSSCVMLAESHPLWIVDSGATDHVARDREAFVEYRRIPKGSRWLYVGNNSK 308

Query: 181 VPVKGIGSYKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNN 240
           V V GIG+ +LHMR GRTL+LHDVL AP+IRR+L+SV  LLKLG+        L ++L +
Sbjct: 309 VAVLGIGTCQLHMRGGRTLILHDVLNAPEIRRDLVSVLALLKLGFGLNFHDMCLNITLGS 368

Query: 241 IHY--------------------------------------------------------- 300
           + +                                                         
Sbjct: 369 VFFGSGYACDGFIVLDCTTNITSSNDDRCFSYITSSTNVDMNVWHSRLGHIAYVLNLVPS 428

Query: 301 ----------------------------------------GPRGKKSIFIRYSEHSKGYV 305
                                                   GPRGKK IFIRYSEHSKGYV
Sbjct: 429 KSVTSTPYELWKGRKPDLIHLRLWGSAAFVRDTSHPHGKLGPRGKKCIFIRYSEHSKGYV 488

BLAST of Moc06g15640 vs. NCBI nr
Match: CAA7035581.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 199.5 bits (506), Expect = 5.2e-47
Identity = 146/431 (33.87%), Postives = 186/431 (43.16%), Query Frame = 0

Query: 1   MKVHLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKG 60
           M++ +THN  + T  D+SR LELE++R+EA +P+N A  A    + N G KRK       
Sbjct: 183 MRMQMTHNVNVKTFEDISRHLELEDERLEAAKPFNEANYA----NSNSGLKRK------- 242

Query: 61  KGDHKNKKPKQYQNDKDKE--KRSMVRPKNKKANIKCYNCHQNGH--------------- 120
           +G++ NK P Q    + K+  KR     K  K  IKCYNC   GH               
Sbjct: 243 RGNNGNKAPDQPDPKRQKKYVKRGKRGGKKDKTKIKCYNCGSLGHFARECTEAKKVLSLD 302

Query: 121 --------CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVP 180
                    S V+LT+SHPLW VDS  TDHVA+ R  +VE+RR+  G +WLYVGNN++V 
Sbjct: 303 STCKYAYVSSCVMLTESHPLWIVDSGATDHVARSREAFVEYRRVPKGTRWLYVGNNSKVA 362

Query: 181 VKGIGSYKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIH 240
           V+GIG+ +LHM  G+TL+LHDVLYAP+IR +L+SV  LLKLG+        L +SL + +
Sbjct: 363 VQGIGTCQLHMSGGKTLILHDVLYAPEIRGDLVSVLALLKLGFVLNFHNLCLQISLRSEY 422

Query: 241 Y----------------------------------------------------------- 276
           +                                                           
Sbjct: 423 FGSGYLERTIKCLRTDRGGEYLSEQFKTLCDEKGIARQLTTPYTPQQNGVAERRNRTLLE 482

BLAST of Moc06g15640 vs. NCBI nr
Match: CAA7045970.1 (unnamed protein product [Microthlaspi erraticum] >CAA7048676.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-46
Identity = 143/361 (39.61%), Postives = 180/361 (49.86%), Query Frame = 0

Query: 17  VSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKGKGDHKNKKPKQYQNDK 76
           V R L  +++R+EA +P+N A  A    + N G KRK       +G + NK P Q    +
Sbjct: 172 VLRSLPEKDERLEAAKPFNEANYA----NSNSGLKRK-------RGYNGNKAPDQPDAKR 231

Query: 77  DKE--KRSMVRPKNKKANIKCYNCHQNGH-----------------------CSFVLLTD 136
            K+  KR     K  K  IKCYNC   GH                        S V+LT+
Sbjct: 232 QKKYVKRGKRGGKKDKTKIKCYNCGSLGHFARECTEAKKVLSLDSTCKYAYVSSCVMLTE 291

Query: 137 SHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPVKGIGSYKLHMRNGRT 196
           SHPLW  DS  TDHVA+ R  +VE+RR+  G +WLYVGNN++V V+GIG+ +LHM  G+T
Sbjct: 292 SHPLWIEDSGATDHVARSREAFVEYRRVPKGTRWLYVGNNSKVAVQGIGTCQLHMSGGKT 351

Query: 197 LLLHDVLYAPDIRRNLLSVTVLLK------------LGYTFTLAGDLLTL----SLNNIH 256
           L+LHDVLYAP+IRR+L+SV  LLK             G     A  +L L    S+    
Sbjct: 352 LILHDVLYAPEIRRDLVSVLALLKSMMAQANLPISYWGDALLTAAYILNLVPSKSVTTTP 411

Query: 257 Y--------------------------------GPRGKKSIFIRYSEHSKGYVFIGEQET 305
           Y                                GPRGKK IFIRYSE SKGYV IGE   
Sbjct: 412 YELWMGRKPNLTHLRAWGSAAFVRDTSHPHGKLGPRGKKCIFIRYSEQSKGYVLIGEHSD 471

BLAST of Moc06g15640 vs. NCBI nr
Match: OMO51040.1 (Zinc finger, CCHC-type [Corchorus olitorius])

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-45
Identity = 130/342 (38.01%), Postives = 177/342 (51.75%), Query Frame = 0

Query: 1   MKVHLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKG 60
           M   LTHN+ I T  DV R  ELEE+++ A   +    +A     G   HKRK  +G K 
Sbjct: 42  MNAMLTHNDSINTFVDVQRHFELEEEQLMAMSNHPEVNMAQSSKRGGSSHKRK--KGGKN 101

Query: 61  KGDHKNKKPKQYQNDKDKEKRSMVRPKNK-KANIKCYNCHQNGH---------------- 120
                N +P   +    K KR     KN+ K+ + CYNC + GH                
Sbjct: 102 VKQDDNVEPHAKRAKTKKRKRGRRAGKNRDKSKVTCYNCGKLGHFSCECTEPKKVTLNSS 161

Query: 121 -------CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPV 180
                   S V+LT+SH LWTVDS  TDHV + R  YVE+RRI  G  W+Y+GN   V +
Sbjct: 162 TPYYSYVTSSVMLTESHSLWTVDSTATDHVVRSREAYVEYRRIPVGTHWIYMGNEIDVEL 221

Query: 181 KGIGSYKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIHY 240
           KGIG+ KL MR G+TL LHDVL+AP++RRNL+SV VL+ L ++   + D + L     + 
Sbjct: 222 KGIGTCKLDMRGGQTLFLHDVLHAPEVRRNLVSVAVLMSLDFSLIFSKDYVKLYSGTTYV 281

Query: 241 GPRGKKSIFIRYSEHSKGYVFIGEQETGSIIEFESRDATFLENDFLRRDEISDEISLFEN 300
           G     + FI       GYVFIGE   GS+ E ESR+ATFLENDF  R +I  +  L + 
Sbjct: 282 GVGYFSNGFIVLDTSFDGYVFIGENSDGSVTELESREATFLENDFPTRGDIDKDFYL-DE 341

Query: 301 YNQNDLLSSNPSWDSLSTVPTVSHPSGRYLNTTCDLDEPQTT 319
             + DL + + S +    +      SG     + +L EP ++
Sbjct: 342 IEEPDLAAPSKSIEVEDEILPSLDLSGSISRLSGELSEPPSS 380

BLAST of Moc06g15640 vs. NCBI nr
Match: KAG7548157.1 (Integrase catalytic core [Arabidopsis suecica])

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-39
Identity = 102/240 (42.50%), Postives = 139/240 (57.92%), Query Frame = 0

Query: 1   MKVHLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKG 60
           MK+ +THN+ + T  D+SR LELE++R+EA RP+N A  A   S    G KRK     +G
Sbjct: 137 MKIQMTHNDNVKTFEDISRYLELEDERLEAARPFNEANYASSSS----GMKRK-----RG 196

Query: 61  KGDHKNKKPKQYQNDKDKEKRSMVRPKNKKANIKCYNCHQNGH----------------- 120
             D+K  +    +  K   KR     +  K  +KCYNC   GH                 
Sbjct: 197 NFDNKASEQANPKKQKKHAKRGKKGGRKDKTKMKCYNCDTLGHFAHECTEAKKVLSLKNS 256

Query: 121 ------CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPVK 180
                  S V+L +S+PLW VDS  TDHVA+ R  + E+RRI  G +WLYVGNN +V V 
Sbjct: 257 RKYAYVSSCVMLAESNPLWIVDSGATDHVARSREAFTEYRRIPKGTRWLYVGNNTKVAVI 316

Query: 181 GIGSYKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIHYG 218
           GIG+ +LHMR G+TL+LHDVLYAP+IRR+L+SV  LL+LG++       L +SL+ + +G
Sbjct: 317 GIGTCQLHMRGGKTLILHDVLYAPEIRRDLVSVLALLRLGFSLNFYDMGLHISLDTVFFG 367

BLAST of Moc06g15640 vs. ExPASy Swiss-Prot
Match: P25601 (Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.3e-04
Identity = 27/75 (36.00%), Postives = 37/75 (49.33%), Query Frame = 0

Query: 116 WTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPVKGIGSYKLHMRNGRTLLLH 175
           W  D+  T H+  DR ++  F R  S  K    G    +P+ G G+      N  T+ LH
Sbjct: 79  WIFDTGCTSHMCHDRSIFSSFTR--SSRKDFVRGVGGSIPIMGSGTV-----NIGTVQLH 138

Query: 176 DVLYAPDIRRNLLSV 191
           DV Y PD+  NL+SV
Sbjct: 139 DVSYVPDLPVNLISV 146

BLAST of Moc06g15640 vs. ExPASy TrEMBL
Match: A0A6D2J7K8 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS22816 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.5e-47
Identity = 146/431 (33.87%), Postives = 186/431 (43.16%), Query Frame = 0

Query: 1   MKVHLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKG 60
           M++ +THN  + T  D+SR LELE++R+EA +P+N A  A    + N G KRK       
Sbjct: 183 MRMQMTHNVNVKTFEDISRHLELEDERLEAAKPFNEANYA----NSNSGLKRK------- 242

Query: 61  KGDHKNKKPKQYQNDKDKE--KRSMVRPKNKKANIKCYNCHQNGH--------------- 120
           +G++ NK P Q    + K+  KR     K  K  IKCYNC   GH               
Sbjct: 243 RGNNGNKAPDQPDPKRQKKYVKRGKRGGKKDKTKIKCYNCGSLGHFARECTEAKKVLSLD 302

Query: 121 --------CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVP 180
                    S V+LT+SHPLW VDS  TDHVA+ R  +VE+RR+  G +WLYVGNN++V 
Sbjct: 303 STCKYAYVSSCVMLTESHPLWIVDSGATDHVARSREAFVEYRRVPKGTRWLYVGNNSKVA 362

Query: 181 VKGIGSYKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIH 240
           V+GIG+ +LHM  G+TL+LHDVLYAP+IR +L+SV  LLKLG+        L +SL + +
Sbjct: 363 VQGIGTCQLHMSGGKTLILHDVLYAPEIRGDLVSVLALLKLGFVLNFHNLCLQISLRSEY 422

Query: 241 Y----------------------------------------------------------- 276
           +                                                           
Sbjct: 423 FGSGYLERTIKCLRTDRGGEYLSEQFKTLCDEKGIARQLTTPYTPQQNGVAERRNRTLLE 482

BLAST of Moc06g15640 vs. ExPASy TrEMBL
Match: A0A6D2KKF9 (CCHC-type domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS33205 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.6e-47
Identity = 143/361 (39.61%), Postives = 180/361 (49.86%), Query Frame = 0

Query: 17  VSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKGKGDHKNKKPKQYQNDK 76
           V R L  +++R+EA +P+N A  A    + N G KRK       +G + NK P Q    +
Sbjct: 172 VLRSLPEKDERLEAAKPFNEANYA----NSNSGLKRK-------RGYNGNKAPDQPDAKR 231

Query: 77  DKE--KRSMVRPKNKKANIKCYNCHQNGH-----------------------CSFVLLTD 136
            K+  KR     K  K  IKCYNC   GH                        S V+LT+
Sbjct: 232 QKKYVKRGKRGGKKDKTKIKCYNCGSLGHFARECTEAKKVLSLDSTCKYAYVSSCVMLTE 291

Query: 137 SHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPVKGIGSYKLHMRNGRT 196
           SHPLW  DS  TDHVA+ R  +VE+RR+  G +WLYVGNN++V V+GIG+ +LHM  G+T
Sbjct: 292 SHPLWIEDSGATDHVARSREAFVEYRRVPKGTRWLYVGNNSKVAVQGIGTCQLHMSGGKT 351

Query: 197 LLLHDVLYAPDIRRNLLSVTVLLK------------LGYTFTLAGDLLTL----SLNNIH 256
           L+LHDVLYAP+IRR+L+SV  LLK             G     A  +L L    S+    
Sbjct: 352 LILHDVLYAPEIRRDLVSVLALLKSMMAQANLPISYWGDALLTAAYILNLVPSKSVTTTP 411

Query: 257 Y--------------------------------GPRGKKSIFIRYSEHSKGYVFIGEQET 305
           Y                                GPRGKK IFIRYSE SKGYV IGE   
Sbjct: 412 YELWMGRKPNLTHLRAWGSAAFVRDTSHPHGKLGPRGKKCIFIRYSEQSKGYVLIGEHSD 471

BLAST of Moc06g15640 vs. ExPASy TrEMBL
Match: A0A1R3FZ26 (Zinc finger, CCHC-type OS=Corchorus olitorius OX=93759 GN=COLO4_37841 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.2e-46
Identity = 130/342 (38.01%), Postives = 177/342 (51.75%), Query Frame = 0

Query: 1   MKVHLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKG 60
           M   LTHN+ I T  DV R  ELEE+++ A   +    +A     G   HKRK  +G K 
Sbjct: 42  MNAMLTHNDSINTFVDVQRHFELEEEQLMAMSNHPEVNMAQSSKRGGSSHKRK--KGGKN 101

Query: 61  KGDHKNKKPKQYQNDKDKEKRSMVRPKNK-KANIKCYNCHQNGH---------------- 120
                N +P   +    K KR     KN+ K+ + CYNC + GH                
Sbjct: 102 VKQDDNVEPHAKRAKTKKRKRGRRAGKNRDKSKVTCYNCGKLGHFSCECTEPKKVTLNSS 161

Query: 121 -------CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPV 180
                   S V+LT+SH LWTVDS  TDHV + R  YVE+RRI  G  W+Y+GN   V +
Sbjct: 162 TPYYSYVTSSVMLTESHSLWTVDSTATDHVVRSREAYVEYRRIPVGTHWIYMGNEIDVEL 221

Query: 181 KGIGSYKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIHY 240
           KGIG+ KL MR G+TL LHDVL+AP++RRNL+SV VL+ L ++   + D + L     + 
Sbjct: 222 KGIGTCKLDMRGGQTLFLHDVLHAPEVRRNLVSVAVLMSLDFSLIFSKDYVKLYSGTTYV 281

Query: 241 GPRGKKSIFIRYSEHSKGYVFIGEQETGSIIEFESRDATFLENDFLRRDEISDEISLFEN 300
           G     + FI       GYVFIGE   GS+ E ESR+ATFLENDF  R +I  +  L + 
Sbjct: 282 GVGYFSNGFIVLDTSFDGYVFIGENSDGSVTELESREATFLENDFPTRGDIDKDFYL-DE 341

Query: 301 YNQNDLLSSNPSWDSLSTVPTVSHPSGRYLNTTCDLDEPQTT 319
             + DL + + S +    +      SG     + +L EP ++
Sbjct: 342 IEEPDLAAPSKSIEVEDEILPSLDLSGSISRLSGELSEPPSS 380

BLAST of Moc06g15640 vs. ExPASy TrEMBL
Match: A0A7N2KXD4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.0e-37
Identity = 101/236 (42.80%), Postives = 138/236 (58.47%), Query Frame = 0

Query: 4   HLTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKGKGD 63
           +LTHNE I T  DV+R LELE +R+EAT+P ++ ++A   S      KRK  +   G+  
Sbjct: 508 NLTHNENIKTFDDVARHLELEAERLEATKPISSVHMAETSSRKASRPKRKQPDYAPGQER 567

Query: 64  HKNKKPKQYQNDKDKEKRSMVRPKNKKANIKCYNCHQNGH-------------------- 123
                PK+ +  K   +    R K  K+ + CYNC + GH                    
Sbjct: 568 PNGPPPKKAKFVKRNTRGK--RAKKDKSKLTCYNCGKKGHFARECAEPKKVTPNPTSHHV 627

Query: 124 --CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPVKGIGS 183
              + VL+ +S P+WTVDS  T+HVA+DR  +VE+RRI  G++ + VGN A V V GIG+
Sbjct: 628 FVTNHVLVANSAPMWTVDSAATEHVARDRVGFVEYRRIPIGSRDIKVGNGASVEVLGIGT 687

Query: 184 YKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIHYG 218
           YKL +R GRTLLLHDVLYAP+IRRNLLSV  LL+LG+ F    + + L L  ++YG
Sbjct: 688 YKLELRGGRTLLLHDVLYAPEIRRNLLSVVTLLRLGFRFIFENNYVLLHLGTVYYG 741

BLAST of Moc06g15640 vs. ExPASy TrEMBL
Match: A0A7N2KXD4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.6e-04
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 0

Query: 217  GPRGKKSIFIRYSEHSKGYVFIGEQETGSIIEFESRDA 255
            GPRGKK IFIRYSEHSKGYV IGEQ  GS +  +  DA
Sbjct: 1019 GPRGKKCIFIRYSEHSKGYVLIGEQLDGSEMMDQEVDA 1056


HSP 2 Score: 165.2 bits (417), Expect = 5.2e-37
Identity = 101/236 (42.80%), Postives = 130/236 (55.08%), Query Frame = 0

Query: 5   LTHNERILTLTDVSRRLELEEDRIEATRPYNAAYVAGRGSHGNKGHKRKHQEGFKG-KGD 64
           +THNE + T  D+ R L+LE  R+   RP   AYVA   S    G KR      K  K D
Sbjct: 1   MTHNESVKTFDDIVRHLKLEVGRLVVARPNEQAYVAESSSRKTSGFKRNRNFFKKNKKSD 60

Query: 65  HKNKKPKQYQNDKDKEKRSMVRPKNKKANIKCYNCHQNGH-------------------- 124
             +KK K     K K        K   + +KCY+    GH                    
Sbjct: 61  DASKKGKIGARKKFK------XVKKDXSKLKCYDYGNKGHFAHECIESKRIRSCSNNSCA 120

Query: 125 --CSFVLLTDSHPLWTVDSRVTDHVAKDRGVYVEFRRISSGAKWLYVGNNARVPVKGIGS 184
              S+V+LT+S PLWT+DS   DH+A+D+G Y+EFRRISSG +W+YVGNN++V VKGI +
Sbjct: 121 YVSSYVMLTESIPLWTIDSXAXDHIARDQGAYIEFRRISSGTRWIYVGNNSKVEVKGIRT 180

Query: 185 YKLHMRNGRTLLLHDVLYAPDIRRNLLSVTVLLKLGYTFTLAGDLLTLSLNNIHYG 218
            KL +  GRTL LHDVLYAPDIRRNL+S+ VLL LG+       ++ L L   +YG
Sbjct: 181 CKLELSKGRTLFLHDVLYAPDIRRNLVSMLVLLSLGFNLIFHDSIMELYLGTTYYG 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7595359.14.4e-5435.98Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis thaliana x Arabi... [more]
CAA7035581.15.2e-4733.87unnamed protein product [Microthlaspi erraticum][more]
CAA7045970.11.2e-4639.61unnamed protein product [Microthlaspi erraticum] >CAA7048676.1 unnamed protein p... [more]
OMO51040.11.3e-4538.01Zinc finger, CCHC-type [Corchorus olitorius][more]
KAG7548157.11.4e-3942.50Integrase catalytic core [Arabidopsis suecica][more]

Pages

Match NameE-valueIdentityDescription
P256017.3e-0436.00Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A6D2J7K82.5e-4733.87Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS22816 ... [more]
A0A6D2KKF95.6e-4739.61CCHC-type domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR... [more]
A0A1R3FZ266.2e-4638.01Zinc finger, CCHC-type OS=Corchorus olitorius OX=93759 GN=COLO4_37841 PE=4 SV=1[more]
A0A7N2KXD44.0e-3742.80Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A7N2KXD47.6e-0471.05Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..88
NoneNo IPR availablePANTHERPTHR35317:SF15ZINC FINGER, CCHC-TYPE-RELATEDcoord: 1..85
NoneNo IPR availablePANTHERPTHR35317OS04G0629600 PROTEINcoord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g15640.1Moc06g15640.1mRNA