Moc06g15090 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g15090
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionATP synthase subunit beta, chloroplastic
Locationchr6: 11784506 .. 11790024 (-)
RNA-Seq ExpressionMoc06g15090
SyntenyMoc06g15090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAATATTTACAACGCTTTGGTAGTTAAGGGTCAAGATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAACAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAAATGGTCTAATGAGAGGAATTGACGTGATTGACATGAAAGGTCCTCTAAATGTTCCAGTCGGCGGAACGACTCTCGGCCGAATTTTCAACGTGGAGTCGACTGAGCATAGGGAAGGTGTTTGCACCCTACGACACCCGTTCGAAAACGATACTACATTTTGCCAAAAATTATCTTGTTATAAGATATGAATTAATAGGTATGAGATATTGACACTCGAGAATATTGGAAGGTTCCAATTCCTGTCATTCAACTTGCGACATGAGTGTTGACACTCCAAAATCTAACCAATGTGCCAACCCCTTGGGATATAATCTATGTTCATTTCTAAAATACAAATTTTGTATTTTTGAATTTTGTTTAAAAAAAACTCTAAACGAAATTTTTTATTTAAAATAATTATTTAGGATAAAATGAGACATGTAAAGACTCCAACTTGGATCATGTATATTAAAAACCTAACATCTTACCACTATGCCAACACCCTAACATGTAAACATTGTATTCTTTTACAAAAAGAAAATTTTTAATTTATTTTTTTAAACTAAAAAAAAACATACGAATTTTGTTAAATTAAAACAAAAAATAAATAACTTTTTTATTTATTTCGTAATTAATGAGATTATTTCAAAGAAAAATTTTTTTAATTAAAAATAAAGTCAAATTTACTCTAAACAAAATTTATTTGCTAAAAAAAACTAATTCTTTTCAAAATCATAACCACCATAAACCATTAAAAGAAAATTTTAAAAAATGAGATTTTATTATAAAAGACTCTGTTTTTATCTTCATTTTTTTTTTAAAATCTTGCAGCAGGACTCTTTTTAATTAAAAGATAAAACAAAGTTGACCAAAAAAAACTAAACCTTGTTAAAAAATTTAAATAAAAACTAACTTTTAAACTTTGAATTGAAATTTAAAAGAATCCAATTTTTTTTTTTAAAACAAGATTTATTTTATAAAACTCATTTTTTTAAGGTATTTTAACCAAAATTTTAAATTAAAATATTTTATTTAAACAAAACTAACTTTATATTTATTTCAAAAAAAAAACTTTCTTTATTAGAAAAAGAAAAACCTTTTTTATTTTAAAACAAAATTTAAAATATCAAAATCCTTATTTTCTTTTCAAAAACTTATTTAAAATTTCTTTTATCTTAAAAATAAAAGGTTTCTTATTATAAAAAAGTTCTTTCAAACGTACCGTAGTGTAGCGGGCTTGGAAGAAGTTAGAGTTTATGATTGGAGGTCCTGCCATTCGCTTGTGTCGTCGGAGGTCGTGGGTATGAAGGAGAAAATGTGGTGGTGGGATAAGAAAGGAGAAGAGATGGAGTGATGATTATGGAGGAAAAAGACGAGTTTTATAGAGGGAGAGAAGAAGAAAAAGTGAGGGTGTGAATTTCTAACTTTCTACACTGTTCTCTCTCTCTGTGTGTTGTGTGCTCTTTAAATACACAAAAAAATAAGAGTAACAATGAGATGTGCCTTTGACGAGGAAAAAATGAAAGAGGAAAAATTGTTAAAAATGAAAGGTTTTGTTAAAATAAAATCTTTATTTAATTAAAACAAAATCTTTTTGAAATAAAATTATTTACTTAAAAACAAATCATTTTTATTTATCTATTTTTTATTTTAATAATAAAACAAAATCTAAACAACCATTTTTTATTTTCTTATTAATAAAATTAAACATTTAAATAAATCTAACATTTTAATTTTAGTTAATTTAAACCTTATATTGAAACTAATAATAAAGTGAACCTATGTTATTCTTTAATTAAAATAAAACTTAATAAAGTAAAATACAATAATATAAATTAAAATTAAAATTAAAAATAAGTCGGACCAAATACGGTATCTACAAATAAAATCAAAATATTTTTTAAAATTTATCAAAGCATTCTTATCATGTACGAACAAAGTATATATGATACATTTGCTATTACAATATTTTTTACACGTACTACAAATACATTAGCGAGAATGAAACAAAGAAGAGACCATAAATCAATTGTCTTGAATCGTTTGACTTCTTTAAGTTTGTGTAATACCTAACTAATAAAACAATACCTAGTTAGGAAAATCAATAAGCTATAAATAGATAAAAGAAAAAAAAAACTAATATCCAATAGACAAATCATAAGTAACCAAAAAAAATGAGATACAGTGAAAAAGGGAATAAGATATACAAAATCTAGAAGTCACACATAAAAAGAACTTATACGATTAGAAAAACATGTGTAGATGAGTGTGTTGTAGGGCAAGAGGATCCCAATGTGCACGAGATAAAAAGAAGAGTCTTCAAGTATTCTGAAAACAATGACACAAATGGCACAAGCGAAAAAGAACACTTTGGCTATAATAATATCCACACCCCATAGTCTACCTAACTTGGTTCCTTCTATCTACAAGTATCCCCTTAATTAATTAAGGGGAGTTTGATACCTTTGCCGTTGTGGTTTGTTAATTACTACTTCAATATTTCTAGATCTTGCATCAGCTAACAACCATCTTGGAAAATAATTAAAAATAAAAAAGTGGGTCGTTATGTACAAAGAATGTCAGTGAAAGTTAAATCGTGCGATTGAGAAAAATAAAGAAAAAAAAAAATCAAGACCATATTTAACAGGATTAAAGATGAAGTGGAACATCTCCTCAACAAAAAATAAATTGATATTTCATCAGTAGCCTGTATACGACAACAACCACTATAATAATTAAACAAAGGAAAAGGAAAGGGGGAGACCAATAGATTGATGTAGAAAGAGTTGTCGTTGTTAACACAAAATCTACCGTGCTTTCCTAAATACTCTAGAACCATAAATTTTGGACCAATCATAAACGGTCACGTCATTGACAAAACTGTATTTTACTTGGGGCAATTAAAAATTATCCCTAAATTAAAATTAAAGACAAAATAAGGGCAATTCCCAAATAATGTAAGTTTCTTTCATTGATCCTTTGCATCGGATTTAATTGGTCGAATTGGGTCATATAAAATTGGGTCTTGAATCAACTTAGTTCACAAATCCATTGGATGGTATTTTGGCCCGAAATCCAAATTACCAATAATTGTGGTGGATTGATATTTAAATTTAAACAAGTTCAAACCCACCTATAGAATTGGGCTGTGTCAAAAATCACCAAAGTCCAAACCTTTTGAAGTTAAATTAGGCTCTCCTAAACCATGCGTCAATTCAACACCACAACTGACTGCGTTTGAGAGCGGGTCACTTAGATCTAACTCAAACAAGTGGGGTGACGTAGATCGAGCTTCGAACGGATATGGGTATGCGCCAAACACTACGAAAACACTGCTGTCTGCGTTTTGCTGCAGTGAAAGCGCTTTAAATCCACCACCGATGTTGCTGGATACTACGGAGGAACACGAGTCACCGAGTCTAAGTGGTATGGGTTGTGGGTTACTGCTAATCAGCCAAGACGTCGCCAAAATGCCATTGGAAACGTCGAAGCCGTTGGATTGTCGATCTGCACGCCGACGCCGCCAGACCCTACTCATCGCCGCGCCACCTAAGTCTCCGAATCGTCAGATTCTCTCATTAGGGAGGGTAATGCGGGTGGGTAACGAGGAAGGAGGGGAACACGAGGGTAGTGGCTCACGCAAAATGAAGAGAAGTAGGGTTCTAGGGTTTCTTTATATGTTTTGAATTAATAGGTCCAATTACCCAATTTTTGAAAACAAAGCCCATGAGTTAAAAGAACTAAAATTCCAAATTTTCAAATATTACTAAACTTAATTGTTTCCAAATAGCTTAAATAAACAAATAAGCCCAAAGATCCATAAAATTTGGCCACAAAATACACTTCAGTAATTAAAATAAAACTCACAATGGCACCATGACAACCCAAAAGAAAATAAAGTGGAACAAACTAAAATCAATTAAAATAAAATCTGAATAAAACCCCGAGACCCGAGGTTAATCTAACATGAGTAACGCGGGGTGTTACATTAAGGATAAGAAGAATCAGGAAGTTTTTGCCAAGATAAATGAACTAAATGAAAAATAGCAAAGATTTATGGGCAGTTCAAGAAGATTGAGTGGAGAAATTAAATTAGCATTAGATGATATGAACAACCGCTGTAGGTTGGATTTCCCTCAAAACAACCTCGTTTCCGACTCTTTAGAGTTGTTTTTCCCTCCCCCTCTTTCCATTACTGTTGCTATGGATGTAGAAGGTCAAGAACAGGTTATCGGTGATTCCGAGCACGACACAGAGCCATTGAAGCATTTGGATTCGGCCACGGTCGAAATCCACTGCCAAATTGCGGCTCGGGCAATTTTGGAGAACACTTCACTGGCCACTCTACAAGGTATTTCGTCTCCAAATTTTCCAGATCTTACTTTGACTAAAAAGCCTTTAGTTTTTTATGATTTAGAACAGGAGAAGACGACGTCGAAAATCGCCAAAATTTTAGTGGCTTTGAATGAAGACACGGAAGAAGATCCCTTGGAGGATGATGGAAACGGTAGGGATGCTCAAGAAAGACTGAATGTTGATGGAGAGGATGAGGATCTTGGAGATTTGCCCCAACAAGTTCACGGAGATGAGTGTGAGGAAGAAAAAGAAAAACGATGATATCTCTCAGTTTGAAGTGCGAATACGTACTCCAGTGCATGAGTCACATCAAGATGAGGAGGAGGTCACTGTTCAAGTGCAAGAAGGAGCATCCGGTCTTGTGGATGTCCCTGATGAGGCCACGGATGAATCATCTTCCTCTTCTTCAAAAGGTATGACCCCTTCTTTTTCGATATAGATGTTTCTGACCCAAATTTCATTGATGCTGCAAAAAACTCAGAGGAAGAGGTGTGTTTAACCAATGTGGTGAAAAAAACAAAGAAAAATAAAACTCCAGCCAAAATTACGCCTGGTGCAATTTCGAGACCGCGCACCCGAGGCATTGTTGCGCGTTTGGCCATCTAAAAAAGCCAAGAGGTCTAGGGCACTTGGCGAGGCAAAAGAGCATCATAAGGAGGTAAATTAAGAAGACCCCACTACTACCAAACAACAACCATCAAAAGCTAAAAGGGTGAGGTTGGAAGTGAAAAAACCCGACTTTACAGTCTATAGTATGTTGGTTGAAAAGGGGTTTGATGATGAGCAGGAGCCCGTGCCAGAACATGTCAAGTGATGGCTTGTGGAGAATAGCTGGGAAACGTTGTTTGCCCCACCTATGCGGGTGTCAGAGGCCTTGGTAAAATAATTCTATGCTGCCATTCACCTAAACTGAGGAGATCCTGTGAGAGTAAGAGGTAAAGTGGTAAAATTCTCTCCTTTTGTTCTTAACACTCACTATGAGTTGTCGGATATGTTTGATGCAATAGCTAATGAGATTTTGGTGCATCCTACGGACAAACAATTGGAGGAGTGA

mRNA sequence

ATGCCTAATATTTACAACGCTTTGGTAGTTAAGGGTCAAGATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAACAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAAATGGTCTAATGAGAGGAATTGACGTGATTGACATGAAAGGTCCTCTAAATGTTCCAGTCGGCGGAACGACTCTCGGCCGAATTTTCAACGTGGAGTCGACTGAGCATAGGGAAGGCTCTCCTAAACCATGCGTCAATTCAACACCACAACTGACTGCGTTTGAGAGCGGGTCACTTAGATCTAACTCAAACAAGTGGGGTGACGTAGATCGAGCTTCGAACGGATATGGGTATGCGCCAAACACTACGAAAACACTGCTGTCTGCGTTTTGCTGCAGTGAAAGCGCTTTAAATCCACCACCGATGTTGCTGGATACTACGGAGGAACACGAGTCACCGAGTCTAAGTGGTATGGGTTGTGGGTTACTGCTAATCAGCCAAGACGTCGCCAAAATGCCATTGGAAACGTCGAAGCCGTTGGATTGTCGATCTGCACGCCGACGCCGCCAGACCCTACTCATCGCCGCGCCACCTAAGTCTCCGAATCGTCAGATTCTCTCATTAGGGAGGGTAATGCGGGTGGGTAACGAGGAAGGAGGGGAACACGAGGGTAGTGGCTCACGCAAAATGAAGAGAAGTAGGGTTCTAGGGTTGGATTTCCCTCAAAACAACCTCGTTTCCGACTCTTTAGAGTTGTTTTTCCCTCCCCCTCTTTCCATTACTGTTGCTATGGATGTAGAAGGTCAAGAACAGGTTATCGGTGATTCCGAGCACGACACAGAGCCATTGAAGCATTTGGATTCGGCCACGGTCGAAATCCACTGCCAAATTGCGGCTCGGGCAATTTTGGAGAACACTTCACTGGCCACTCTACAAGGTATTTCGTCTCCAAATTTTCCAGATCTTACTTTGACTAAAAAGCCTTTAGTTTTTTATGATTTAGAACAGGAGAAGACGACGTCGAAAATCGCCAAAATTTTAGTGGCTTTGAATGAAGACACGGAAGAAGATCCCTTGGAGGATGATGGAAACGGTAGGGATGCTCAAGAAAGACTGAATGTTGATGGAGAGGATGAGGATCTTGGAGATTTGCCCCAACAAGTTCACGGAGATGAGTTGCATGAGTCACATCAAGATGAGGAGGAGGTCACTGTTCAAGTGCAAGAAGGAGCATCCGGTCTTGTGGATGTCCCTGATGAGGCCACGGATGAATCATCTTCCTCTTCTTCAAAAGGAGATCCTGTGAGAGTAAGAGGTAAAGTGGTAAAATTCTCTCCTTTTGTTCTTAACACTCACTATGAGTTGTCGGATATGTTTGATGCAATAGCTAATGAGATTTTGGTGCATCCTACGGACAAACAATTGGAGGAGTGA

Coding sequence (CDS)

ATGCCTAATATTTACAACGCTTTGGTAGTTAAGGGTCAAGATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAACAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAAATGGTCTAATGAGAGGAATTGACGTGATTGACATGAAAGGTCCTCTAAATGTTCCAGTCGGCGGAACGACTCTCGGCCGAATTTTCAACGTGGAGTCGACTGAGCATAGGGAAGGCTCTCCTAAACCATGCGTCAATTCAACACCACAACTGACTGCGTTTGAGAGCGGGTCACTTAGATCTAACTCAAACAAGTGGGGTGACGTAGATCGAGCTTCGAACGGATATGGGTATGCGCCAAACACTACGAAAACACTGCTGTCTGCGTTTTGCTGCAGTGAAAGCGCTTTAAATCCACCACCGATGTTGCTGGATACTACGGAGGAACACGAGTCACCGAGTCTAAGTGGTATGGGTTGTGGGTTACTGCTAATCAGCCAAGACGTCGCCAAAATGCCATTGGAAACGTCGAAGCCGTTGGATTGTCGATCTGCACGCCGACGCCGCCAGACCCTACTCATCGCCGCGCCACCTAAGTCTCCGAATCGTCAGATTCTCTCATTAGGGAGGGTAATGCGGGTGGGTAACGAGGAAGGAGGGGAACACGAGGGTAGTGGCTCACGCAAAATGAAGAGAAGTAGGGTTCTAGGGTTGGATTTCCCTCAAAACAACCTCGTTTCCGACTCTTTAGAGTTGTTTTTCCCTCCCCCTCTTTCCATTACTGTTGCTATGGATGTAGAAGGTCAAGAACAGGTTATCGGTGATTCCGAGCACGACACAGAGCCATTGAAGCATTTGGATTCGGCCACGGTCGAAATCCACTGCCAAATTGCGGCTCGGGCAATTTTGGAGAACACTTCACTGGCCACTCTACAAGGTATTTCGTCTCCAAATTTTCCAGATCTTACTTTGACTAAAAAGCCTTTAGTTTTTTATGATTTAGAACAGGAGAAGACGACGTCGAAAATCGCCAAAATTTTAGTGGCTTTGAATGAAGACACGGAAGAAGATCCCTTGGAGGATGATGGAAACGGTAGGGATGCTCAAGAAAGACTGAATGTTGATGGAGAGGATGAGGATCTTGGAGATTTGCCCCAACAAGTTCACGGAGATGAGTTGCATGAGTCACATCAAGATGAGGAGGAGGTCACTGTTCAAGTGCAAGAAGGAGCATCCGGTCTTGTGGATGTCCCTGATGAGGCCACGGATGAATCATCTTCCTCTTCTTCAAAAGGAGATCCTGTGAGAGTAAGAGGTAAAGTGGTAAAATTCTCTCCTTTTGTTCTTAACACTCACTATGAGTTGTCGGATATGTTTGATGCAATAGCTAATGAGATTTTGGTGCATCCTACGGACAAACAATTGGAGGAGTGA

Protein sequence

MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLNVPVGGTTLGRIFNVESTEHREGSPKPCVNSTPQLTAFESGSLRSNSNKWGDVDRASNGYGYAPNTTKTLLSAFCCSESALNPPPMLLDTTEEHESPSLSGMGCGLLLISQDVAKMPLETSKPLDCRSARRRRQTLLIAAPPKSPNRQILSLGRVMRVGNEEGGEHEGSGSRKMKRSRVLGLDFPQNNLVSDSLELFFPPPLSITVAMDVEGQEQVIGDSEHDTEPLKHLDSATVEIHCQIAARAILENTSLATLQGISSPNFPDLTLTKKPLVFYDLEQEKTTSKIAKILVALNEDTEEDPLEDDGNGRDAQERLNVDGEDEDLGDLPQQVHGDELHESHQDEEEVTVQVQEGASGLVDVPDEATDESSSSSSKGDPVRVRGKVVKFSPFVLNTHYELSDMFDAIANEILVHPTDKQLEE
Homology
[Close]
BLAST of Moc06g15090 vs. NCBI nr
Match: YP_009456068.1 (ATP synthase CF1 beta subunit [Momordica charantia] >AUJ21835.1 ATP synthase CF1 beta subunit [Momordica charantia])

HSP 1 Score: 144.4 bits (363), Expect = 2.5e-30
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG+DVID KGPLN
Sbjct: 40  MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTKGPLN 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGGTTLGRIFNV
Sbjct: 100 VPVGGTTLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. NCBI nr
Match: YP_009752082.1 (CF1 subunit beta [Dendrosicyos socotranus] >YP_009753096.1 CF1 subunit beta [Corallocarpus boehmii] >QIT05492.1 CF1 subunit beta [Dendrosicyos socotranus] >QIT06168.1 CF1 subunit beta [Corallocarpus boehmii])

HSP 1 Score: 136.7 bits (343), Expect = 5.2e-28
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG++V+D + PL+
Sbjct: 40  MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGGTTLGRIFNV
Sbjct: 100 VPVGGTTLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. NCBI nr
Match: AAY44151.1 (ATP synthase beta subunit, partial [Dendrosicyos socotranus])

HSP 1 Score: 136.7 bits (343), Expect = 5.2e-28
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG++V+D + PL+
Sbjct: 31  MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLS 90

Query: 61  VPVGGTTLGRIFNV 75
           VPVGGTTLGRIFNV
Sbjct: 91  VPVGGTTLGRIFNV 104

[Close]
BLAST of Moc06g15090 vs. NCBI nr
Match: AAY44153.1 (ATP synthase beta subunit, partial [Gurania tubulosa])

HSP 1 Score: 136.7 bits (343), Expect = 5.2e-28
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1  MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
          MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG++V+D + PL+
Sbjct: 23 MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLS 82

Query: 61 VPVGGTTLGRIFNV 75
          VPVGGTTLGRIFNV
Sbjct: 83 VPVGGTTLGRIFNV 96

[Close]
BLAST of Moc06g15090 vs. NCBI nr
Match: CAB90104.1 (ATP synthase beta subunit, partial [Kedrostis nana])

HSP 1 Score: 136.7 bits (343), Expect = 5.2e-28
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG++V+D + PL+
Sbjct: 31  MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLS 90

Query: 61  VPVGGTTLGRIFNV 75
           VPVGGTTLGRIFNV
Sbjct: 91  VPVGGTTLGRIFNV 104

[Close]
BLAST of Moc06g15090 vs. ExPASy Swiss-Prot
Match: A4QK25 (ATP synthase subunit beta, chloroplastic OS=Arabis hirsuta OX=78191 GN=atpB PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-29
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKG+DT GQEINVTCEVQQLLGNNRVRAVAMSAT GL RG+DV+DM  PL+
Sbjct: 40  MPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGG TLGRIFNV
Sbjct: 100 VPVGGATLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. ExPASy Swiss-Prot
Match: P19366 (ATP synthase subunit beta, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=atpB PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-29
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKG+DT GQEINVTCEVQQLLGNNRVRAVAMSAT GL RG+DV+DM  PL+
Sbjct: 40  MPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGG TLGRIFNV
Sbjct: 100 VPVGGATLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. ExPASy Swiss-Prot
Match: A4QKB2 (ATP synthase subunit beta, chloroplastic OS=Barbarea verna OX=50458 GN=atpB PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-29
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKG+DT GQEINVTCEVQQLLGNNRVRAVAMSAT GL RG+DV+DM  PL+
Sbjct: 40  MPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGG TLGRIFNV
Sbjct: 100 VPVGGATLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. ExPASy Swiss-Prot
Match: Q9MS49 (ATP synthase subunit beta, chloroplastic OS=Brassica napus OX=3708 GN=atpB PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-29
Identity = 66/92 (71.74%), Postives = 73/92 (79.35%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKG+DT GQEINVTCEVQQLLGNNRVRAVAMSAT GL RG+DV+DM  PL+
Sbjct: 40  MPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLS 99

Query: 61  VPVGGTTLGRIFNVESTEHREGSPKPCVNSTP 93
           VPVGG TLGRIFNV         P   + ++P
Sbjct: 100 VPVGGATLGRIFNVLGEPVNNLGPVDTLTTSP 131

[Close]
BLAST of Moc06g15090 vs. ExPASy Swiss-Prot
Match: Q6QBP2 (ATP synthase subunit beta, chloroplastic OS=Castanea sativa OX=21020 GN=atpB PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-29
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKG+DTAGQ+INVTCEVQQLLGNNRVRAVAMSAT+GLMRG++VID   PL+
Sbjct: 40  MPNIYNALVVKGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGG TLGRIFNV
Sbjct: 100 VPVGGATLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. ExPASy TrEMBL
Match: A0A2I6BZY4 (ATP synthase subunit beta, chloroplastic OS=Momordica charantia OX=3673 GN=atpB PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-30
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG+DVID KGPLN
Sbjct: 40  MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTKGPLN 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGGTTLGRIFNV
Sbjct: 100 VPVGGTTLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. ExPASy TrEMBL
Match: A0A6H0EV22 (ATP synthase subunit beta, chloroplastic OS=Corallocarpus boehmii OX=386154 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-28
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG++V+D + PL+
Sbjct: 40  MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGGTTLGRIFNV
Sbjct: 100 VPVGGTTLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. ExPASy TrEMBL
Match: Q9MRB2 (ATP synthase subunit beta (Fragment) OS=Kedrostis nana OX=85219 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-28
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG++V+D + PL+
Sbjct: 31  MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLS 90

Query: 61  VPVGGTTLGRIFNV 75
           VPVGGTTLGRIFNV
Sbjct: 91  VPVGGTTLGRIFNV 104

[Close]
BLAST of Moc06g15090 vs. ExPASy TrEMBL
Match: Q29S91 (ATP synthase subunit beta (Fragment) OS=Gurania tubulosa OX=328385 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-28
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1  MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
          MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG++V+D + PL+
Sbjct: 23 MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLS 82

Query: 61 VPVGGTTLGRIFNV 75
          VPVGGTTLGRIFNV
Sbjct: 83 VPVGGTTLGRIFNV 96

[Close]
BLAST of Moc06g15090 vs. ExPASy TrEMBL
Match: A0A6M4SS17 (ATP synthase subunit beta, chloroplastic OS=Indofevillea khasiana OX=383665 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-28
Identity = 66/74 (89.19%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNAL+VKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSAT+GLMRG+DVID + PL+
Sbjct: 40  MPNIYNALIVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTRAPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGG TLGRIFNV
Sbjct: 100 VPVGGATLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-30
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           MPNIYNALVVKG+DT GQEINVTCEVQQLLGNNRVRAVAMSAT GL RG+DV+DM  PL+
Sbjct: 40  MPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLS 99

Query: 61  VPVGGTTLGRIFNV 75
           VPVGG TLGRIFNV
Sbjct: 100 VPVGGATLGRIFNV 113

[Close]
BLAST of Moc06g15090 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 56.6 bits (135), Expect = 6.3e-08
Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           +P I  +L V+   T      +  EV   LG N VR +AM  T GL+RG  V++   P+ 
Sbjct: 104 LPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPIT 163

Query: 61  VPVGGTTLGRIFNV 75
           VPVG  TLGRI NV
Sbjct: 164 VPVGRATLGRIMNV 172

[Close]
BLAST of Moc06g15090 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 56.6 bits (135), Expect = 6.3e-08
Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           +P I  +L V+   T      +  EV   LG N VR +AM  T GL+RG  V++   P+ 
Sbjct: 107 LPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPIT 166

Query: 61  VPVGGTTLGRIFNV 75
           VPVG  TLGRI NV
Sbjct: 167 VPVGRATLGRIMNV 175

[Close]
BLAST of Moc06g15090 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 56.6 bits (135), Expect = 6.3e-08
Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 1   MPNIYNALVVKGQDTAGQEINVTCEVQQLLGNNRVRAVAMSATNGLMRGIDVIDMKGPLN 60
           +P I  +L V+   T      +  EV   LG N VR +AM  T GL+RG  V++   P+ 
Sbjct: 104 LPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPIT 163

Query: 61  VPVGGTTLGRIFNV 75
           VPVG  TLGRI NV
Sbjct: 164 VPVGRATLGRIMNV 172

The following BLAST results are available for this feature:
BLAST of Moc06g15090 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009456068.12.5e-3095.95ATP synthase CF1 beta subunit [Momordica charantia] >AUJ21835.1 ATP synthase CF1... [more]
YP_009752082.15.2e-2887.84CF1 subunit beta [Dendrosicyos socotranus] >YP_009753096.1 CF1 subunit beta [Cor... [more]
AAY44151.15.2e-2887.84ATP synthase beta subunit, partial [Dendrosicyos socotranus][more]
AAY44153.15.2e-2887.84ATP synthase beta subunit, partial [Gurania tubulosa][more]
CAB90104.15.2e-2887.84ATP synthase beta subunit, partial [Kedrostis nana][more]
BLAST of Moc06g15090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A4QK252.8e-2986.49ATP synthase subunit beta, chloroplastic OS=Arabis hirsuta OX=78191 GN=atpB PE=3... [more]
P193662.8e-2986.49ATP synthase subunit beta, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=atpB... [more]
A4QKB22.8e-2986.49ATP synthase subunit beta, chloroplastic OS=Barbarea verna OX=50458 GN=atpB PE=3... [more]
Q9MS492.8e-2971.74ATP synthase subunit beta, chloroplastic OS=Brassica napus OX=3708 GN=atpB PE=3 ... [more]
Q6QBP22.8e-2986.49ATP synthase subunit beta, chloroplastic OS=Castanea sativa OX=21020 GN=atpB PE=... [more]
BLAST of Moc06g15090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2I6BZY41.2e-3095.95ATP synthase subunit beta, chloroplastic OS=Momordica charantia OX=3673 GN=atpB ... [more]
A0A6H0EV222.5e-2887.84ATP synthase subunit beta, chloroplastic OS=Corallocarpus boehmii OX=386154 GN=a... [more]
Q9MRB22.5e-2887.84ATP synthase subunit beta (Fragment) OS=Kedrostis nana OX=85219 GN=atpB PE=3 SV=... [more]
Q29S912.5e-2887.84ATP synthase subunit beta (Fragment) OS=Gurania tubulosa OX=328385 GN=atpB PE=3 ... [more]
A0A6M4SS172.5e-2889.19ATP synthase subunit beta, chloroplastic OS=Indofevillea khasiana OX=383665 GN=a... [more]
BLAST of Moc06g15090 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00480.12.0e-3086.49ATP synthase subunit beta [more]
AT5G08670.16.3e-0843.24ATP synthase alpha/beta family protein [more]
AT5G08680.16.3e-0843.24ATP synthase alpha/beta family protein [more]
AT5G08690.16.3e-0843.24ATP synthase alpha/beta family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.10.170coord: 1..58
e-value: 7.1E-18
score: 66.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..439
NoneNo IPR availablePANTHERPTHR15184:SF65F0F1-TYPE ATP SYNTHASE, BETA SUBUNITcoord: 1..74
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 1..74
NoneNo IPR availableCDDcd18115ATP-synt_F1_beta_Ncoord: 1..59
e-value: 1.04914E-22
score: 89.4982
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 1..54
e-value: 8.3E-10
score: 39.0
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilySUPERFAMILY50615N-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc06g15090.1Moc06g15090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046034 ATP metabolic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism